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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTMA is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1708.6
Number of samples
349
Samples
Sample
Description
TPM
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
3375.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
3356.3
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
3245.9
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
3149.9
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
3072.3
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2980.2
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
2932.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2892.1
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
2885.7
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2883.7
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
2877.1
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
2844.8
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
2817.5
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
2806.6
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
2759.3
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2755.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2711.9
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
2662.1
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
2660.1
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
2636.9
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
2549.7
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
2545.5
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
2543.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
2527.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2523.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
2518.5
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
2514.7
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
2502.4
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
2478.6
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
2463.3
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
2461.2
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2452.7
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
2447.0
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2432.9
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2430.6
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
2424.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
2412.8
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
2407.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2377.7
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2361.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
2356.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2348.6
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
2339.1
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
2332.3
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2332.2
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
2314.1
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
2310.7
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
2308.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
2301.1
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
2299.0
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
2298.5
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
2296.3
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
2279.8
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
2278.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2276.0
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
2263.0
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
2259.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
2244.3
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
2241.2
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
2236.7
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
2230.6
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
2230.3
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2223.3
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
2218.2
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
2200.6
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
2189.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2188.3
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2183.6
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
2178.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
2129.1
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
2116.4
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
2113.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
2111.9
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
2109.2
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
2106.1
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2105.2
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2092.8
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
2091.8
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
2091.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
2082.0
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
2073.4
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
2064.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
2054.9
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
2052.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
2048.5
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
2048.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
2038.2
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
2036.2
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
2031.5
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
2024.1
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
2023.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
2022.9
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
2020.3
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
2018.1
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1986.1
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1982.6
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1980.0
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1974.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1966.4
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1956.7
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1955.1
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1951.3
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1950.7
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1949.9
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1943.0
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1941.9
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1940.7
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1939.9
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1930.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1926.7
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1922.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1921.8
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1912.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1907.5
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1894.5
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1892.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1878.1
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
1864.9
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1864.6
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1858.7
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1852.8
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
1850.5
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1848.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1832.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1826.7
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1823.9
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1821.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1818.4
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1814.5
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1807.1
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1805.3
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1798.7
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1796.0
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1794.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1793.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
1790.2
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1786.8
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1786.0
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1785.7
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1778.2
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1778.1
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1770.8
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1770.7
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1767.6
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1763.4
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1760.0
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1737.9
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
1731.4
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1727.6
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1726.0
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1725.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
1714.7
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1713.5
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1707.1
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1695.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1692.7
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1689.5
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1688.3
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1687.6
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1683.5
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1681.6
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1680.7
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1678.3
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1675.3
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1669.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1668.0
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1666.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1661.4
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1657.1
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1655.4
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1646.7
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1642.0
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1641.4
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1637.2
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1632.4
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1631.6
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1627.9
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
1624.0
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1623.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1615.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1605.8
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1603.5
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1602.5
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1600.6
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1599.7
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1598.2
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1598.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1595.8
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1594.9
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1594.5
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1585.2
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1582.7
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1582.3
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1579.4
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1576.9
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1576.1
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1567.9
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1566.5
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1562.0
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1553.6
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1553.4
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1537.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1534.9
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1530.7
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1525.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1522.6
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1522.5
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1519.9
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1519.0
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1512.9
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1510.9
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
1505.2
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1502.0
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1501.6
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1497.8
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1495.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1495.5
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
1493.8
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1493.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1493.5
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1491.0
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1485.4
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1485.3
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1476.9
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1468.8
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1463.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1459.9
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1459.5
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1455.8
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1453.6
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1449.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1447.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1441.0
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1433.9
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1430.9
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1430.0
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
1428.4
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1425.5
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1425.4
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1418.5
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1413.9
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1407.4
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1405.1
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1403.6
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1402.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1402.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1401.3
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1397.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1396.8
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1394.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1378.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1370.6
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1366.6
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1358.1
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1354.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1353.1
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1346.6
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1345.2
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1338.9
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1333.1
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1324.7
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1320.8
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1318.3
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1312.4
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1303.8
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1289.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1289.2
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1288.6
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1285.4
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1278.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1274.2
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1266.2
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1263.7
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1255.0
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1250.4
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1250.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1242.0
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1239.9
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1238.0
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1237.0
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1233.3
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1220.5
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1212.4
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1205.4
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1205.2
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
1200.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1198.4
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1198.2
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1197.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1195.8
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1195.1
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1190.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1187.7
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
1187.3
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1181.6
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1180.9
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1177.1
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1174.9
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1161.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1160.0
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1159.0
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1158.2
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1154.7
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1154.7
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1144.2
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1140.6
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1135.7
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1134.6
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1133.6
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1122.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1121.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1108.5
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1096.5
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1087.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
1085.8
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1072.4
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1071.2
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1071.0
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1070.7
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1069.9
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1056.6
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1049.2
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1048.8
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1044.9
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1034.2
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1028.7
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1023.3
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1020.6
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1012.5
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1012.3
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1008.4
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1008.3
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1000.5
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
995.6
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
975.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
975.3
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
968.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
943.5
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
941.2
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
916.5
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
915.5
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
904.0
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
878.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
849.3
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
846.2
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
822.1
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
657.5
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
516.5
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTMA is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1700.1
Number of samples
81
Samples
Sample
Description
TPM
DO46602
0 years, female, NA, stage:III, dead, 205 days
3418.9
DO46463
0 years, female, NA, stage:III, dead, 2451 days
3041.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
3006.5
DO46586
0 years, female, NA, stage:III, dead, 1019 days
2990.4
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2866.2
DO46538
0 years, female, NA, stage:III, dead, 1527 days
2604.5
DO46597
0 years, female, NA, stage:III, dead, 393 days
2578.0
DO46611
0 years, female, NA, stage:III, dead, 734 days
2568.6
DO46436
0 years, female, NA, stage:III, alive, 3193 days
2536.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
2279.5
DO46551
0 years, female, NA, stage:III, dead, 1055 days
2170.7
DO46330
0 years, female, NA, stage:III, dead, 684 days
2102.8
DO46402
0 years, female, NA, stage:III, dead, 511 days
2093.2
DO46370
0 years, female, NA, stage:III, dead, 1727 days
2080.1
DO46328
0 years, female, NA, stage:III, dead, 972 days
2058.0
DO46588
0 years, female, NA, stage:III, dead, 438 days
2019.3
DO46378
0 years, female, NA, stage:III, alive, 843 days
2003.4
DO46338
0 years, female, NA, stage:III, dead, 596 days
1987.6
DO46571
0 years, female, NA, stage:III, dead, 243 days
1956.5
DO46384
0 years, female, NA, stage:III, dead, 614 days
1947.2
DO46388
0 years, female, NA, stage:III, dead, 413 days
1927.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
1891.9
DO46561
0 years, female, NA, stage:III, dead, 195 days
1874.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
1868.1
DO46354
0 years, female, NA, stage:III, dead, 843 days
1866.1
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1857.0
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1818.8
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1797.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1789.1
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1787.6
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1787.5
DO46334
0 years, female, NA, stage:III, dead, 496 days
1754.8
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1744.2
DO46568
0 years, female, NA, stage:III, dead, 320 days
1743.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
1713.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1710.0
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1670.4
DO46581
0 years, female, NA, stage:III, dead, 408 days
1659.8
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1650.0
DO46340
0 years, female, NA, stage:III, dead, 616 days
1642.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
1640.8
DO46362
0 years, female, NA, stage:III, dead, 1639 days
1623.7
DO46336
0 years, female, NA, stage:IV, dead, 664 days
1621.9
DO46326
0 years, female, NA, stage:III, dead, 701 days
1587.8
DO46325
0 years, female, NA, stage:III, dead, 477 days
1585.8
DO46392
0 years, female, NA, stage:III, dead, 628 days
1579.4
DO46364
0 years, female, NA, stage:III, dead, 806 days
1553.6
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1525.9
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1510.8
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1484.8
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1482.3
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1481.5
DO46566
0 years, female, NA, stage:III, dead, 673 days
1440.9
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1428.7
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1425.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
1410.3
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1402.6
DO46344
0 years, female, NA, stage:III, dead, 642 days
1401.7
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1391.0
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1376.0
DO46332
0 years, female, NA, stage:III, dead, 689 days
1366.2
DO46398
0 years, female, NA, stage:III, alive, 437 days
1353.8
DO46327
0 years, female, NA, stage:III, dead, 184 days
1347.4
DO46350
0 years, female, NA, stage:III, dead, 886 days
1341.0
DO46404
0 years, female, NA, stage:III, dead, 690 days
1330.0
DO46331
0 years, female, NA, stage:III, dead, 612 days
1286.1
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1270.8
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1232.6
DO46358
0 years, female, NA, stage:III, dead, 423 days
1227.6
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1216.6
DO46606
0 years, female, NA, stage:III, alive, 804 days
1154.9
DO46448
0 years, female, NA, stage:III, dead, 654 days
1106.3
DO46396
0 years, female, NA, stage:III, dead, 583 days
1092.5
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1069.2
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1060.4
DO46333
0 years, female, NA, stage:III, dead, 359 days
1054.5
DO46400
0 years, female, NA, stage:III, dead, 719 days
1052.6
DO46576
0 years, female, NA, stage:III, alive, 133 days
1004.3
DO46518
0 years, female, NA, stage:III, alive, 2960 days
910.3
DO46390
0 years, female, NA, stage:III, dead, 374 days
848.2
DO46366
0 years, female, NA, stage:III, dead, 2054 days
573.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
1.8
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
1.7
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
1.4
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
1.1
10c2d629-0287-4511-ac25-f29031_D2
Tumor
1.1
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
1.0
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.9
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.9
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.8
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.7
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.7
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.5
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.4
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.4
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.4
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.4
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.3
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.3
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.2
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.2
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.0
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.0
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.0
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.0
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.0
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.0
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.1
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.1
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.1
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.1
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.2
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.3
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.3
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.4
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.4
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.4
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.4
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.4
15524912-685a-47ce-a824-567848_D2
Tumor
-0.5
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.5
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.5
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.6
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.7
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.7
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.7
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.7
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.8
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.8
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-1.0
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-1.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.0
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-1.0
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-1.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-1.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.0
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.0
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-1.0
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.1
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-1.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.2
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-1.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-1.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-1.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-1.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.4
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.4
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.4
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.5
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-1.5
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.7
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-1.7
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-1.7
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.8
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.8
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-1.8
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-1.9
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-1.9
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-1.9
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-1.9
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-2.0
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-2.1
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-2.3
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-2.3
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-2.6
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-2.7
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-2.7
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-3.0
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-3.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-3.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-3.5
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-3.7
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-4.4
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.