Expression of PTMA in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PTMA is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1397.79

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

1328.6

Number of samples

492

Samples

Sample	Description	TPM
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	3656.6
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	3493.7
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	3319.6
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	3206.7
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	3126.9
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	3067.5
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	2980.1
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	2903.7
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	2863.7
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	2810.6
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	2750.3
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	2650.8
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	2647.7
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	2625.6
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	2577.2
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	2569.9
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	2561.0
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	2548.8
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	2547.3
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	2495.4
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	2468.8
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	2461.6
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	2439.6
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	2432.8
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	2424.0
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	2420.1
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	2410.6
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	2367.1
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	2341.5
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	2340.6
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	2334.2
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	2332.4
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	2318.3
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	2298.2
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	2293.8
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	2287.1
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	2279.7
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	2232.7
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	2216.6
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	2184.4
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	2180.1
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	2164.4
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	2156.8
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	2143.3
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	2142.8
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	2132.4
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	2113.6
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	2111.0
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	2097.0
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	2086.0
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	2052.3
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	2050.2
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	2047.1
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	2015.7
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	2001.8
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	1993.9
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	1993.4
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	1992.6
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	1991.6
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	1988.5
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	1978.1
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	1974.2
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	1953.4
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	1937.9
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	1929.0
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	1925.3
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	1918.5
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	1890.3
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	1870.7
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	1851.5
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	1838.4
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	1836.5
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	1823.7
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	1805.9
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	1805.5
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	1804.0
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	1800.8
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	1799.9
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	1781.9
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	1763.9
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	1763.8
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	1754.2
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	1753.2
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	1752.2
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	1744.7
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	1743.8
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	1740.6
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	1735.8
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	1730.6
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	1715.5
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	1709.2
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	1701.6
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	1700.6
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	1697.2
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	1694.5
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	1690.8
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	1690.5
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	1689.9
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	1682.4
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	1673.4
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	1666.1
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	1665.7
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	1665.6
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	1662.0
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	1661.1
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	1654.3
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	1650.1
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	1650.1
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	1646.5
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	1646.1
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	1641.6
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	1639.7
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	1636.5
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	1636.2
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	1631.3
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	1628.5
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	1628.0
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	1627.3
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	1624.8
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	1613.6
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	1604.0
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	1596.2
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	1596.1
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	1595.1
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	1591.0
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	1589.5
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	1561.7
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	1561.7
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	1555.8
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	1555.7
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	1555.1
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	1554.1
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	1551.2
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	1549.1
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	1546.5
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	1543.6
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	1540.5
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	1539.9
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	1537.8
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	1535.2
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	1523.7
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	1522.3
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	1522.2
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	1521.1
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	1521.0
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	1518.3
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	1515.8
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	1512.8
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	1512.6
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	1502.3
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	1494.4
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	1489.3
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	1485.3
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	1484.2
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	1481.3
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	1476.5
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	1474.9
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	1472.5
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	1472.4
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	1470.4
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	1463.5
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	1460.9
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	1458.4
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	1458.1
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	1456.6
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	1455.7
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	1452.8
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	1448.6
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	1447.1
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	1445.4
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	1442.3
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	1439.2
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	1434.8
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	1434.5
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	1434.2
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	1432.4
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	1428.1
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	1426.2
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	1421.8
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	1421.3
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	1417.2
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	1415.1
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	1415.1
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	1406.6
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	1389.0
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	1387.2
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	1380.4
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	1379.1
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	1375.6
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	1369.0
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	1368.7
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	1365.8
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	1365.0
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	1363.7
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	1361.1
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	1358.7
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	1358.1
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	1350.1
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	1346.7
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	1346.4
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	1345.8
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	1345.1
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	1342.5
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	1339.7
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	1338.0
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	1337.8
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	1334.7
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	1333.7
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	1330.1
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	1329.8
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	1326.8
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	1323.1
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	1322.8
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	1322.0
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	1322.0
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	1321.0
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	1317.9
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	1316.4
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	1315.9
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	1309.6
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	1309.1
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	1307.8
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	1306.8
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	1306.3
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	1299.4
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	1296.2
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	1294.1
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	1292.7
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	1287.3
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	1284.5
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	1281.5
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	1280.3
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	1269.6
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	1265.8
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	1265.5
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	1263.0
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	1262.4
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	1261.4
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	1261.4
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	1260.0
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	1259.8
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	1255.0
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	1252.2
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	1251.9
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	1248.3
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	1248.1
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	1246.0
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	1245.5
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	1241.9
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	1240.5
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	1238.8
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	1238.6
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	1235.2
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	1235.2
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	1232.8
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	1228.0
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	1226.0
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	1225.6
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	1225.6
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	1224.5
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	1220.1
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	1219.1
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	1214.1
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	1213.8
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	1211.0
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	1205.7
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	1203.7
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	1203.7
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	1203.1
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	1201.2
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	1199.2
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	1198.9
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	1189.4
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	1187.4
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	1183.6
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	1183.0
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	1179.4
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	1179.3
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	1167.2
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	1161.2
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	1157.3
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	1155.3
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	1149.0
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	1147.4
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	1145.0
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	1141.6
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	1141.3
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	1139.5
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	1135.9
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	1134.0
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	1128.7
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	1127.7
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	1124.6
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	1123.6
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	1117.4
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	1109.7
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	1109.2
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	1106.7
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	1102.6
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	1100.8
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	1098.6
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	1097.5
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	1095.3
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	1094.9
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	1093.9
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	1093.5
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	1087.6
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	1087.3
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	1085.4
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	1084.9
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	1080.1
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	1076.0
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	1075.5
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	1072.3
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	1070.4
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	1066.4
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	1065.4
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	1064.4
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	1063.7
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	1061.5
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	1060.1
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	1056.0
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	1054.8
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	1051.5
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	1049.7
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	1044.8
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	1044.2
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	1040.5
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	1037.7
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	1036.4
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	1035.5
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	1032.9
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	1031.5
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	1030.8
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	1029.3
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	1021.5
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	1021.4
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	1013.7
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	1011.6
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	1010.4
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	1008.4
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	1008.3
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	1007.4
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	1001.4
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	995.7
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	994.2
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	991.5
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	988.6
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	982.2
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	979.4
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	975.3
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	973.9
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	970.7
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	966.6
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	964.2
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	950.3
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	946.0
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	944.0
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	942.0
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	941.9
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	941.4
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	940.6
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	939.6
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	938.8
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	938.5
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	937.9
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	936.1
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	934.1
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	933.8
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	931.0
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	931.0
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	929.7
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	929.6
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	929.6
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	925.9
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	925.6
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	923.8
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	920.4
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	918.7
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	916.4
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	913.3
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	910.7
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	906.4
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	903.4
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	900.8
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	897.7
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	896.3
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	893.7
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	891.3
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	886.2
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	885.0
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	880.8
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	875.5
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	874.1
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	873.4
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	871.9
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	870.4
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	864.2
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	863.4
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	859.7
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	857.9
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	857.7
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	856.3
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	853.0
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	848.0
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	843.2
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	840.3
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	837.9
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	833.9
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	831.5
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	830.4
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	825.3
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	822.9
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	820.1
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	817.0
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	817.0
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	808.7
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	805.4
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	805.1
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	799.9
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	793.1
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	792.9
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	792.8
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	785.7
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	779.9
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	776.0
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	773.4
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	769.0
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	765.4
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	760.1
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	760.1
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	755.2
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	754.4
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	754.3
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	753.7
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	751.8
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	749.1
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	744.4
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	742.5
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	741.3
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	741.0
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	735.1
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	733.2
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	724.6
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	724.6
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	724.6
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	712.7
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	711.1
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	709.6
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	704.4
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	698.8
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	696.5
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	694.6
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	694.1
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	681.6
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	680.8
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	676.3
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	673.7
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	667.4
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	663.8
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	662.7
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	661.3
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	655.6
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	654.1
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	649.0
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	648.8
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	648.0
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	644.8
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	642.0
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	635.1
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	631.4
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	628.8
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	618.7
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	617.2
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	613.7
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	607.8
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	590.7
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	581.2
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	570.1
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	568.0
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	562.7
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	561.2
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	559.5
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	531.6
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	530.5
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	519.1
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	502.4
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	477.2
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	447.5
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	446.1
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	262.2
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	195.0
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0236850004	Tumor	1.6
CPT0226250004	Tumor	1.3
CPT0013210004	Tumor	1.1
CPT0245350003	Tumor	1.1
CPT0245680003	Tumor	0.9
CPT0237620004	Tumor	0.8
CPT0013130003	Tumor	0.7
CPT0194790003	Tumor	0.7
CPT0246590003	Tumor	0.7
CPT0237480004	Tumor	0.6
CPT0087820003	Tumor	0.6
C3N-01620-05	Normal	0.6
CPT0163910003	Tumor	0.6
CPT0163840003	Tumor	0.6
C3N-00295-05	Normal	0.5
CPT0013000004	Tumor	0.5
CPT0245500003	Tumor	0.5
CPT0195860003	Tumor	0.5
CPT0163160003	Tumor	0.5
CPT0008630003	Tumor	0.4
CPT0223970003	Tumor	0.4
CPT0246540003	Tumor	0.4
CPT0163530003	Tumor	0.4
CPT0226130003	Tumor	0.4
CPT0243090003	Tumor	0.3
CPT0008930003	Tumor	0.3
CPT0245630003	Tumor	0.3
CPT0169640003	Tumor	0.3
CPT0163600003	Tumor	0.3
CPT0013430003	Tumor	0.3
CPT0237130004	Tumor	0.3
CPT0248350003	Normal	0.3
CPT0229220002	Normal	0.3
CPT0241980004	Tumor	0.2
CPT0163410003	Tumor	0.2
CPT0246620003	Tumor	0.2
CPT0245180003	Tumor	0.2
CPT0245730003	Tumor	0.2
CPT0278700002	Normal	0.2
CPT0127050003	Tumor	0.2
CPT0235470002	Normal	0.2
CPT0222180003	Tumor	0.2
CPT0162940003	Tumor	0.2
CPT0248520003	Tumor	0.2
CPT0088060004	Tumor	0.1
CPT0184530003	Tumor	0.1
CPT0199880003	Tumor	0.1
CPT0250310003	Tumor	0.1
CPT0281470002	Normal	0.1
CPT0245600003	Tumor	0.1
CPT0244940004	Tumor	0.1
CPT0163650003	Tumor	0.1
CPT0226390003	Tumor	0.1
CPT0237640003	Normal	0.1
CPT0094490004	Tumor	0.1
CPT0169740004	Normal	0.1
CPT0177010003	Tumor	0.1
CPT0245130003	Tumor	0.1
CPT0223450003	Tumor	0.0
CPT0008520008	Tumor	0.0
CPT0245010003	Tumor	0.0
CPT0011290003	Tumor	0.0
CPT0163240003	Tumor	0.0
CPT0201830004	Tumor	0.0
C3N-04275-05	Normal	0.0
CPT0245450003	Tumor	0.0
CPT0245230004	Tumor	0.0
CPT0163090003	Tumor	0.0
CPT0084630009	Tumor	0.0
CPT0226440003	Tumor	0.0
CPT0024810003	Tumor	0.0
CPT0244890004	Tumor	0.0
CPT0094280004	Tumor	0.0
CPT0222360003	Tumor	0.0
CPT0237500003	Normal	0.0
CPT0261520003	Tumor	0.0
CPT0163480003	Tumor	-0.1
CPT0162990004	Tumor	-0.1
CPT0194800003	Normal	-0.1
CPT0123180003	Tumor	-0.1
CPT0163860003	Normal	-0.1
CPT0008960003	Normal	-0.1
CPT0177200003	Tumor	-0.1
CPT0087990003	Tumor	-0.1
CPT0245550003	Tumor	-0.1
CPT0220610003	Tumor	-0.1
CPT0245300003	Tumor	-0.1
CPT0207870004	Tumor	-0.1
CPT0163720003	Normal	-0.1
CPT0226030003	Tumor	-0.1
CPT0248330003	Tumor	-0.1
CPT0011130005	Tumor	-0.1
CPT0163790003	Tumor	-0.1
C3N-00857-05	Normal	-0.1
CPT0163340003	Tumor	-0.1
CPT0190850003	Tumor	-0.1
CPT0163800003	Normal	-0.1
CPT0011320003	Normal	-0.1
C3N-04276-06	Normal	-0.1
CPT0088410003	Tumor	-0.1
CPT0162890003	Tumor	-0.2
CPT0226270003	Normal	-0.2
CPT0163430003	Normal	-0.2
CPT0163170003	Normal	-0.2
CPT0194260003	Normal	-0.2
CPT0196210003	Tumor	-0.2
CPT0194250003	Tumor	-0.2
CPT0245560003	Normal	-0.2
C3N-02693-06	Normal	-0.2
CPT0084650004	Normal	-0.2
CPT0226350003	Normal	-0.2
CPT0245400003	Tumor	-0.2
CPT0088010003	Normal	-0.2
CPT0199820003	Tumor	-0.2
CPT0163250003	Normal	-0.2
CPT0163610003	Normal	-0.2
CPT0199700003	Tumor	-0.2
CPT0094420004	Tumor	-0.3
CPT0095040003	Tumor	-0.3
CPT0245410003	Normal	-0.3
CPT0196040003	Tumor	-0.3
CPT0236620003	Tumor	-0.3
CPT0088430003	Normal	-0.3
CPT0013250003	Normal	-0.3
CPT0088080003	Normal	-0.3
CPT0245060004	Tumor	-0.3
CPT0094560004	Tumor	-0.3
CPT0177710003	Tumor	-0.3
CPT0163740003	Tumor	-0.3
CPT0194960003	Tumor	-0.3
CPT0220620003	Normal	-0.3
CPT0176770003	Tumor	-0.3
CPT0201860004	Normal	-0.3
CPT0235910003	Tumor	-0.3
CPT0256560003	Tumor	-0.3
CPT0245460003	Normal	-0.4
CPT0169730003	Tumor	-0.4
CPT0177390003	Tumor	-0.4
C3N-01859-04	Normal	-0.4
CPT0226090003	Normal	-0.4
CPT0237150003	Normal	-0.4
CPT0094580003	Normal	-0.4
CPT0190860003	Normal	-0.4
CPT0123260003	Tumor	-0.4
CPT0169890003	Tumor	-0.4
CPT0226450003	Normal	-0.4
CPT0094350004	Tumor	-0.4
CPT0223460003	Normal	-0.4
CPT0236870003	Normal	-0.4
CPT0194420003	Tumor	-0.5
CPT0222200003	Normal	-0.5
CPT0195680003	Tumor	-0.5
CPT0163490003	Normal	-0.5
CPT0235460003	Tumor	-0.5
CPT0199710003	Normal	-0.5
CPT0243140004	Normal	-0.5
CPT0199890003	Normal	-0.5
CPT0013460003	Normal	-0.6
CPT0177220003	Normal	-0.6
CPT0245020003	Normal	-0.6
CPT0163020003	Normal	-0.6
CPT0246670003	Tumor	-0.6
C3N-04279-05	Normal	-0.6
CPT0236640003	Normal	-0.7
CPT0226400003	Normal	-0.8
C3N-01758-04	Normal	-0.9
CPT0123190003	Normal	-0.9
CPT0199830003	Normal	-0.9
CPT0195880003	Normal	-0.9
CPT0245190003	Normal	-0.9
CPT0235920003	Normal	-0.9
CPT0245140003	Normal	-0.9
CPT0195700003	Normal	-1.0
CPT0196060003	Normal	-1.1
CPT0242000004	Normal	-1.2
CPT0123280003	Normal	-1.2
CPT0226340003	Tumor	-1.3
CPT0169920003	Normal	-1.4
CPT0013030003	Normal	-1.8
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA047183
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS