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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPATA13 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
47.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
40.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
39.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
32.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
31.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
26.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
25.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
20.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
16.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
7.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPATA13 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
31.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
27.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
25.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
21.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
19.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
17.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
13.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
12.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
11.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
10.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
10.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
9.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
8.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
7.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
7.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
6.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
6.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
6.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
6.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
5.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
5.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
4.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
4.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
3.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPATA13 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
43.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
29.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
28.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
26.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
23.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
17.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
7.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPATA13 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
44.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
44.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
42.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
39.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
38.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
38.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
35.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
30.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
28.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
25.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
22.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
22.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
17.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
16.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
15.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
14.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
11.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
11.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
11.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
10.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
7.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
7.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
7.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
7.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
6.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
5.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
3.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
3.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
1.2
CPT0064370003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0086370003
Normal
0.5
CPT0088480003
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0020130001
Normal
0.4
CPT0088550004
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0025920001
Normal
0.4
CPT0088760003
Tumor
0.4
CPT0001190001
Normal
0.4
CPT0001260009
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0019130003
Tumor
0.4
CPT0001350001
Normal
0.4
CPT0011240003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0079510001
Normal
0.3
CPT0066470004
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0086890003
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0086030003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0076330003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0092790003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0066520001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0001550001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0088920001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0025880003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0069010001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0065690003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0001540009
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0025350003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0081880003
Tumor
-0.4
CPT0078660003
Tumor
-0.5
CPT0012670003
Tumor
-0.5
CPT0092290003
Tumor
-0.6
CPT0021240003
Tumor
-0.6
CPT0069160003
Tumor
-0.6
CPT0012900004
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0013790003
Normal
-0.7
CPT0001180009
Tumor
-0.7
CPT0024670003
Tumor
-0.8
CPT0088780001
Normal
-0.8
CPT0065810003
Tumor
-1.1
CPT0001340003
Tumor
-1.2
CPT0078930003
Tumor
N/A
CPT0078830003
Tumor
N/A
CPT0078940001
Normal
N/A
CPT0023710001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0088640003
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0088630003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0077500001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
