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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
148.0
nTPM
GTEx:
148.0
nTPM
FANTOM5:
58.0
Scaled Tags Per Million
Pig:
40.4
nTPM
Mouse:
119.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
148.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 148.0
Samples: 105
Max nTPM: 266.3
Min nTPM: 54.3
Std nTPM: 49.6
Median nTPM:
491_1
89 years, female
266.3
162_1
79 years, female
263.8
149_1
88 years, male
260.2
81_1
67 years, male
255.2
413_1
59 years, female
252.1
490_1
67 years, female
250.3
466_1
57 years, female
234.7
32_1
67 years, male
232.0
501_1
88 years, male
227.3
142_1
61 years, female
222.9
126_1
63 years, male
218.7
415_1
77 years, female
218.5
89_1
63 years, male
210.6
35_1
74 years, female
202.4
139_1
64 years, female
202.2
9_1
66 years, female
201.4
18_1
88 years, male
199.9
495_1
57 years, female
196.9
137_1
83 years, male
196.1
117_1
61 years, male
195.8
109_1
81 years, female
194.8
17_1
71 years, male
192.7
518_1
75 years, female
192.0
153_1
70 years, female
190.3
43_1
64 years, female
189.9
120_1
70 years, female
186.7
324_1
76 years, male
185.0
4_1
88 years, female
183.7
414_1
84 years, female
181.0
313_1
79 years, female
180.4
217_1
76 years, male
179.4
145_1
84 years, male
177.1
119_1
70 years, female
175.7
2_1
77 years, female
175.4
315_1
62 years, female
174.7
316_1
62 years, male
171.5
115_1
83 years, male
169.6
468_1
89 years, male
167.3
499_1
55 years, female
165.9
42_1
85 years, male
164.0
6_1
73 years, female
157.8
265_1
87 years, male
154.6
288_1
66 years, female
150.1
322_1
76 years, male
150.0
480_1
63 years, male
149.7
396_1
62 years, male
147.0
503_1
68 years, male
146.3
99_1
64 years, male
144.5
526_1
61 years, male
142.3
308_1
70 years, female
138.6
266_1
85 years, male
137.6
311_1
78 years, male
134.0
348_1
84 years, male
132.0
517_1
88 years, male
131.5
319_1
81 years, male
131.2
251_1
78 years, male
131.1
254_1
77 years, female
130.8
246_1
77 years, male
130.6
389_1
86 years, female
130.1
335_1
73 years, female
126.5
243_1
75 years, male
125.4
292_1
71 years, male
125.4
314_1
67 years, male
125.4
307_1
66 years, female
124.8
320_1
89 years, female
121.9
41_1
94 years, female
121.5
377_1
82 years, female
120.6
375_1
74 years, female
116.4
386_1
76 years, male
114.3
405_1
91 years, male
114.1
321_1
62 years, female
113.9
347_1
72 years, male
113.3
447_1
81 years, male
112.4
293_1
68 years, female
110.7
379_1
60 years, male
110.7
355_1
70 years, female
110.2
506_1
65 years, male
109.4
349_1
83 years, male
108.2
406_1
79 years, male
107.3
376_1
75 years, female
106.7
286_1
68 years, female
106.4
291_1
76 years, male
106.4
264_1
73 years, female
105.4
350_1
84 years, female
105.3
352_1
62 years, male
104.8
425_1
59 years, female
104.6
237_1
82 years, male
103.3
295_1
61 years, female
102.9
229_1
69 years, female
101.8
173_1
67 years, male
100.7
394_1
75 years, female
99.7
356_1
87 years, female
98.7
318_1
68 years, male
97.8
404_1
82 years, female
97.7
189_1
76 years, male
97.3
351_1
91 years, male
97.3
354_1
81 years, female
96.4
172_1
72 years, female
93.3
353_1
82 years, female
87.3
452_1
88 years, female
84.8
384_1
83 years, male
83.9
317_1
60 years, male
83.3
177_1
74 years, male
61.7
218_1
71 years, female
55.5
163_1
78 years, male
54.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.