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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
238.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
421.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
419.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
404.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
399.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
359.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
344.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
340.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
327.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
323.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
309.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
305.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
297.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
297.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
291.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
283.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
279.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
275.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
273.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
268.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
266.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
265.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
262.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
258.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
257.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
257.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
256.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
253.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
252.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
250.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
243.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
242.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
239.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
237.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
227.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
220.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
216.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
215.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
204.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
204.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
203.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
198.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
198.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
196.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
193.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
191.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
191.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
189.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
188.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
185.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
177.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
176.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
175.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
175.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
175.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
164.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
158.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
158.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
149.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
146.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
144.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
136.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
126.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
116.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
330.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1070.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1025.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
910.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
900.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
831.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
779.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
762.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
759.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
724.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
709.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
677.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
674.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
665.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
660.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
655.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
651.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
649.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
646.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
637.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
627.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
604.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
591.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
590.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
589.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
574.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
573.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
567.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
564.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
557.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
551.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
541.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
541.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
540.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
537.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
535.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
534.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
534.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
524.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
523.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
521.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
512.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
511.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
508.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
507.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
507.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
503.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
501.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
500.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
494.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
493.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
491.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
491.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
488.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
486.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
486.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
486.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
484.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
473.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
467.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
466.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
464.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
463.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
463.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
458.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
456.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
456.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
448.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
448.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
448.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
447.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
445.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
442.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
441.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
440.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
438.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
436.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
435.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
435.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
434.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
434.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
434.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
434.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
432.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
432.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
431.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
430.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
429.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
424.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
422.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
422.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
422.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
418.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
416.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
414.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
414.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
413.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
412.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
412.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
411.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
411.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
409.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
406.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
406.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
405.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
404.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
403.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
402.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
402.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
402.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
401.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
401.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
401.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
401.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
400.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
399.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
399.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
398.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
398.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
397.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
397.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
396.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
394.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
394.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
393.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
392.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
391.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
389.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
388.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
388.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
387.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
386.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
384.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
381.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
380.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
380.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
379.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
379.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
378.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
378.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
378.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
377.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
376.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
376.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
372.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
372.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
371.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
370.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
370.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
370.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
370.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
369.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
369.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
369.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
367.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
365.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
365.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
363.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
362.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
360.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
357.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
356.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
355.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
355.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
354.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
353.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
351.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
350.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
349.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
348.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
347.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
346.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
346.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
346.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
346.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
345.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
345.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
345.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
344.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
344.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
343.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
343.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
343.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
342.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
342.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
341.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
340.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
340.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
339.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
339.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
339.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
338.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
338.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
337.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
337.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
335.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
335.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
334.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
334.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
334.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
333.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
333.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
333.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
332.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
332.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
332.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
331.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
331.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
331.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
330.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
327.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
327.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
327.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
327.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
326.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
326.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
326.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
325.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
324.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
324.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
323.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
322.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
322.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
322.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
321.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
321.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
321.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
320.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
320.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
319.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
319.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
319.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
318.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
318.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
317.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
317.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
316.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
315.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
315.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
315.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
313.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
313.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
312.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
312.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
312.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
312.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
309.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
308.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
307.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
306.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
306.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
306.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
305.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
304.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
304.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
304.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
303.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
303.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
303.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
301.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
301.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
300.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
300.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
300.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
300.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
299.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
298.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
298.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
298.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
298.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
296.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
296.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
294.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
294.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
293.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
292.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
292.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
292.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
291.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
291.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
291.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
290.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
290.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
290.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
289.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
289.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
288.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
288.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
287.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
286.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
286.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
286.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
286.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
284.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
284.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
284.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
284.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
283.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
283.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
282.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
282.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
282.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
281.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
280.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
280.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
280.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
280.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
279.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
279.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
279.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
279.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
279.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
278.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
277.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
277.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
277.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
276.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
275.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
275.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
274.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
274.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
274.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
272.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
272.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
272.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
272.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
271.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
271.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
271.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
270.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
270.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
270.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
270.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
270.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
270.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
270.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
269.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
268.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
266.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
266.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
266.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
266.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
266.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
265.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
265.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
265.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
265.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
265.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
264.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
264.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
264.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
262.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
262.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
261.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
260.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
260.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
260.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
259.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
259.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
258.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
258.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
257.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
257.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
257.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
257.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
256.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
256.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
256.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
255.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
255.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
255.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
255.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
254.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
253.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
253.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
253.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
252.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
252.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
252.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
252.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
251.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
251.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
251.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
251.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
251.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
250.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
250.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
249.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
249.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
248.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
248.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
245.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
245.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
244.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
244.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
244.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
244.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
243.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
243.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
243.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
243.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
243.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
242.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
242.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
242.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
242.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
241.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
241.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
241.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
240.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
240.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
238.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
238.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
237.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
237.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
236.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
236.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
235.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
234.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
234.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
234.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
234.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
233.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
232.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
232.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
232.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
231.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
231.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
231.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
231.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
229.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
229.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
228.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
228.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
228.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
227.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
225.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
224.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
224.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
224.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
223.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
222.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
222.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
221.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
221.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
221.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
220.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
219.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
219.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
218.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
218.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
216.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
215.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
215.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
215.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
215.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
215.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
214.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
214.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
213.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
212.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
211.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
211.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
210.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
210.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
210.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
209.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
209.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
209.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
208.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
206.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
204.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
204.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
202.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
202.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
200.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
198.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
198.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
198.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
198.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
198.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
197.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
197.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
196.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
195.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
195.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
194.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
193.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
192.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
192.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
192.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
190.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
189.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
189.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
188.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
188.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
187.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
187.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
186.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
186.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
185.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
184.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
184.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
181.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
176.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
175.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
175.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
175.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
174.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
173.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
172.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
172.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
172.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
164.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
161.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
158.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
150.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
147.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
142.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
136.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
88.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR4 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
261.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1055.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
503.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
495.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
473.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
448.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
444.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
444.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
437.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
437.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
398.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
397.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
391.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
384.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
378.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
369.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
362.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
355.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
353.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
344.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
340.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
338.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
319.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
311.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
303.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
294.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
290.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
288.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
287.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
285.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
281.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
280.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
279.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
274.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
271.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
268.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
267.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
266.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
265.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
260.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
251.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
250.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
247.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
246.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
245.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
235.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
232.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
231.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
227.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
224.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
224.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
219.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
219.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
218.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
218.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
218.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
214.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
213.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
212.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
210.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
210.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
210.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
210.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
207.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
206.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
205.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
204.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
204.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
202.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
201.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
201.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
196.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
195.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
192.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
189.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
187.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
186.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
185.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
184.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
182.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
180.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
179.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
179.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
179.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
175.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
173.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
173.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
172.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
171.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
171.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
168.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
168.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
166.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
164.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
160.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
157.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
157.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
152.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
145.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
108.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SSR4 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
318.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1457.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
845.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
751.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
736.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
725.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
723.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
703.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
665.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
647.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
646.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
644.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
641.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
638.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
634.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
632.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
620.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
613.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
607.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
601.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
587.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
581.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
580.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
562.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
549.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
542.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
532.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
523.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
522.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
515.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
514.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
513.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
500.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
495.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
488.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
487.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
484.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
481.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
479.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
478.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
474.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
470.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
469.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
467.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
467.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
467.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
459.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
458.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
455.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
446.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
443.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
443.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
432.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
428.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
425.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
424.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
421.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
419.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
418.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
417.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
416.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
415.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
408.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
408.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
400.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
397.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
393.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
393.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
390.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
384.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
382.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
381.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
381.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
377.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
375.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
375.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
373.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
371.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
371.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
368.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
358.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
355.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
354.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
350.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
349.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
348.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
348.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
348.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
348.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
347.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
343.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
342.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
340.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
340.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
340.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
339.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
339.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
337.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
335.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
334.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
331.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
331.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
328.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
328.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
325.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
324.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
322.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
322.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
321.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
320.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
319.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
319.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
318.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
317.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
317.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
316.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
316.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
314.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
312.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
312.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
311.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
310.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
309.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
309.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
308.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
308.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
307.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
305.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
305.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
302.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
302.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
302.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
302.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
300.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
299.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
297.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
296.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
295.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
293.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
291.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
291.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
291.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
291.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
290.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
287.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
287.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
284.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
284.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
283.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
282.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
282.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
281.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
280.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
279.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
278.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
277.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
276.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
276.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
274.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
273.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
272.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
272.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
272.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
271.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
271.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
268.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
268.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
268.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
267.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
264.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
263.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
263.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
260.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
260.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
256.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
255.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
254.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
253.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
251.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
250.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
250.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
250.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
249.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
245.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
243.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
241.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
241.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
239.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
237.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
235.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
235.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
234.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
231.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
231.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
229.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
229.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
227.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
227.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
227.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
226.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
226.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
225.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
224.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
224.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
222.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
220.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
219.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
219.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
218.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
217.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
217.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
216.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
216.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
216.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
213.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
211.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
209.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
207.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
206.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
205.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
204.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
204.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
204.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
203.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
202.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
199.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
197.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
196.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
195.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
195.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
194.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
185.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
184.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
184.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
184.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
181.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
181.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
179.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
177.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
176.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
175.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
174.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
174.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
171.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
171.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
170.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
166.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
165.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
164.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
163.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
163.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
158.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
157.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
157.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
156.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
156.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
155.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
155.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
153.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
153.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
152.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
151.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
151.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
149.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
147.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
146.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
146.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
143.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
139.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
138.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
138.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
136.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
127.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
121.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
115.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
115.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
114.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
110.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
94.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
93.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
47.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
33.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
25.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.5
CPT0012180003
Tumor
1.3
CPT0069160003
Tumor
1.1
CPT0002350011
Tumor
1.0
CPT0088690003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0075130003
Tumor
0.8
CPT0001340003
Tumor
0.8
CPT0076330003
Tumor
0.8
CPT0012670003
Tumor
0.8
CPT0088480003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0063630003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0066470004
Tumor
0.5
CPT0001260009
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0079410003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0065930003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0065870003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0002270011
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0078840001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0066520001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0012370003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0012290003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0064400001
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0009060003
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0026410003
Tumor
-0.5
CPT0013790003
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0012090003
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0018250001
Normal
-0.6
CPT0012570003
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0012900004
Tumor
-0.7
CPT0017410003
Tumor
-0.8
CPT0017450001
Normal
-0.9
CPT0012920003
Normal
-1.1
CPT0009080003
Normal
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
