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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
124.4
nTPM
GTEx:
124.4
nTPM
FANTOM5:
296.8
Scaled Tags Per Million
Pig:
388.0
nTPM
Mouse:
733.8
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
124.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 124.4
Samples: 105
Max nTPM: 266.8
Min nTPM: 4.1
Std nTPM: 67.2
Median nTPM:
352_1
62 years, male
266.8
506_1
65 years, male
264.1
218_1
71 years, female
257.1
321_1
62 years, female
250.1
354_1
81 years, female
245.7
386_1
76 years, male
245.5
377_1
82 years, female
244.4
452_1
88 years, female
239.0
351_1
91 years, male
235.9
319_1
81 years, male
226.3
163_1
78 years, male
225.8
350_1
84 years, female
224.2
349_1
83 years, male
224.0
356_1
87 years, female
219.9
353_1
82 years, female
211.3
355_1
70 years, female
208.6
243_1
75 years, male
206.4
394_1
75 years, female
192.2
503_1
68 years, male
186.4
447_1
81 years, male
180.8
6_1
73 years, female
178.6
2_1
77 years, female
174.9
320_1
89 years, female
168.8
379_1
60 years, male
166.3
115_1
83 years, male
164.9
4_1
88 years, female
164.1
173_1
67 years, male
163.6
322_1
76 years, male
162.9
316_1
62 years, male
161.2
292_1
71 years, male
159.5
335_1
73 years, female
157.0
35_1
74 years, female
155.3
99_1
64 years, male
153.8
318_1
68 years, male
153.7
293_1
68 years, female
149.5
376_1
75 years, female
149.1
177_1
74 years, male
147.8
384_1
83 years, male
145.5
172_1
72 years, female
145.2
295_1
61 years, female
144.6
517_1
88 years, male
144.6
480_1
63 years, male
144.5
317_1
60 years, male
143.9
237_1
82 years, male
142.7
264_1
73 years, female
141.8
137_1
83 years, male
140.8
153_1
70 years, female
138.3
42_1
85 years, male
135.5
251_1
78 years, male
134.4
406_1
79 years, male
133.8
286_1
68 years, female
131.4
389_1
86 years, female
127.6
229_1
69 years, female
123.0
526_1
61 years, male
122.5
291_1
76 years, male
118.7
375_1
74 years, female
118.2
120_1
70 years, female
118.0
9_1
66 years, female
116.3
404_1
82 years, female
115.0
348_1
84 years, male
114.6
396_1
62 years, male
112.3
468_1
89 years, male
108.5
126_1
63 years, male
102.7
425_1
59 years, female
101.6
145_1
84 years, male
99.8
17_1
71 years, male
95.3
189_1
76 years, male
95.1
18_1
88 years, male
92.2
347_1
72 years, male
91.8
217_1
76 years, male
88.3
518_1
75 years, female
83.3
117_1
61 years, male
83.0
405_1
91 years, male
82.8
246_1
77 years, male
80.8
109_1
81 years, female
80.4
288_1
66 years, female
78.2
265_1
87 years, male
76.4
266_1
85 years, male
76.0
162_1
79 years, female
75.0
254_1
77 years, female
71.1
41_1
94 years, female
70.6
324_1
76 years, male
68.2
32_1
67 years, male
65.5
81_1
67 years, male
57.7
314_1
67 years, male
56.0
142_1
61 years, female
55.2
43_1
64 years, female
54.6
139_1
64 years, female
53.9
313_1
79 years, female
52.4
311_1
78 years, male
49.6
119_1
70 years, female
46.2
307_1
66 years, female
45.4
499_1
55 years, female
43.3
315_1
62 years, female
37.9
89_1
63 years, male
30.4
149_1
88 years, male
24.7
501_1
88 years, male
23.1
308_1
70 years, female
22.6
466_1
57 years, female
21.5
495_1
57 years, female
20.2
414_1
84 years, female
19.2
415_1
77 years, female
18.8
491_1
89 years, female
11.1
490_1
67 years, female
9.3
413_1
59 years, female
4.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.