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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
877.8
nTPM
HPA Brain:
582.2
nTPM
GTEx:
877.8
nTPM
FANTOM5:
468.7
Scaled Tags Per Million
Pig:
647.9
nTPM
Mouse:
2292.0
nTPM
Allen mouse:
17.5
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
582.2
Sample id
Sample description
nTPM
Amygdala nTPM: 561.3
2514
Male, age 75, right hemisphere
599.0
2814
Male, age 76, right hemisphere
593.0
2695
Female, age 67, right hemisphere
588.3
2517
Female, age 94, left hemisphere
551.0
1987
Female, age 91, left hemisphere
474.9
Basal amygdala nTPM: 527.9
2609
Male, age 75, right hemisphere
650.1
2110
Male, age 80, left hemisphere
580.4
2243
Female, age 91, right hemisphere
525.1
2827
Female, age 67, right hemisphere
499.8
1955
Male, age 76, both hemispheres
457.8
2685
Female, age 94, left hemisphere
454.2
Central amygdala nTPM: 576.8
2826
Female, age 94, left hemisphere
789.4
2515
Male, age 75, right hemisphere
677.6
1905
Male, age 76, both hemispheres
542.7
2239
Male, age 80, left hemisphere
519.0
2701
Female, age 91, right hemisphere
355.0
Corticomedial amygdala nTPM: 496.2
2428
Male, age 75, right hemisphere
647.3
2829
Male, age 80, left hemisphere
580.4
2240
Male, age 76, both hemispheres
451.7
2429
Female, age 94, left hemisphere
450.0
2242
Female, age 91, right hemisphere
436.8
2535
Female, age 67, right hemisphere
411.2
Lateral amygdala nTPM: 582.2
2516
Male, age 75, right hemisphere
767.8
2534
Female, age 94, left hemisphere
678.8
2830
Female, age 67, right hemisphere
614.5
1883
Male, age 76, both hemispheres
512.5
2256
Male, age 80, left hemisphere
501.4
2255
Female, age 91, right hemisphere
418.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
877.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 877.8
Samples: 152
Max nTPM: 4014.2
Min nTPM: 258.5
Std nTPM: 413.6
Median nTPM: 797.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
4014.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
2256.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
2213.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1935.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1765.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1698.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1649.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1531.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1497.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1473.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1428.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
1401.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1382.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1281.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1258.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1236.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1231.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1204.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1179.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1167.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1164.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1139.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1108.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1093.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1078.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1069.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1066.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1050.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1050.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1046.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1045.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1042.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
1041.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1028.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1027.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
1024.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1018.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1009.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
1000.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
996.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
982.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
976.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
975.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
964.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
951.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
945.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
938.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
927.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
924.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
924.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
912.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
911.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
909.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
893.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
885.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
879.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
877.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
869.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
869.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
862.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
861.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
859.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
857.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
853.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
852.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
843.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
842.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
842.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
832.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
831.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
823.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
817.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
805.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
803.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
803.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
800.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
794.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
793.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
791.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
791.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
790.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
784.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
783.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
782.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
774.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
768.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
752.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
750.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
726.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
725.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
723.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
721.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
718.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
718.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
709.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
700.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
700.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
698.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
694.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
688.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
684.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
681.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
680.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
677.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
677.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
676.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
675.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
674.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
671.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
666.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
666.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
655.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
655.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
654.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
641.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
640.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
636.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
636.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
633.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
632.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
617.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
612.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
611.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
610.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
598.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
595.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
594.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
594.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
591.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
585.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
584.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
582.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
581.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
574.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
569.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
563.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
562.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
541.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
519.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
517.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
510.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
487.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
472.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
463.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
449.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
442.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
439.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
425.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
418.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
371.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
356.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
258.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2292.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 2292.0
Samples: 4
Max nTPM: 2707.9
Min nTPM: 1944.1
Sample A
Male
1944.1
Sample B
Male
2247.9
Sample C
Female
2707.9
Sample D
Female
2268.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.