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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
527.2
nTPM
FANTOM5:
528.9
Scaled Tags Per Million
Pig:
819.7
nTPM
Allen mouse:
6.1
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
527.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 439.6
2301
Female, age 85, both hemispheres
461.2
2188
Female, age 91, both hemispheres
454.5
2090
Male, age 80, both hemispheres
437.2
1984
Male, age 76, both hemispheres
405.4
Dorsal cochlear nucleus nTPM: 490.8
2802
Male, age 74, right hemisphere
557.9
2187
Female, age 91, both hemispheres
507.9
2058
Male, age 76, both hemispheres
485.6
2370
Male, age 61, both hemispheres
479.9
2378
Male, age 80, both hemispheres
422.6
Dorsal tegmental nucleus nTPM: 475.5
2083
Male, age 80, both hemispheres
555.6
2326
Male, age 74, both hemispheres
511.0
2358
Male, age 61, both hemispheres
425.9
1936
Male, age 76, left hemisphere
409.5
Dorsolateral tegmental area nTPM: 477.2
2751
Female, age 85, both hemispheres
609.7
2654
Male, age 80, both hemispheres
523.4
2360
Male, age 74, both hemispheres
434.5
2337
Male, age 61, both hemispheres
424.5
2141
Male, age 76, both hemispheres
394.0
Kolliker-Fuse nucleus nTPM: 468.6
2315
Male, age 76, right hemisphere
505.1
2163
Male, age 80, both hemispheres
488.7
2793
Female, age 91, left hemisphere
412.2
Lateral lemniscal nuclei nTPM: 397.8
2169
Male, age 76, both hemispheres
442.5
2746
Female, age 85, left hemisphere
408.3
2320
Female, age 91, left hemisphere
398.6
2453
Male, age 74, right hemisphere
374.1
2036
Male, age 80, both hemispheres
365.7
Lateral parabrachial nucleus nTPM: 447.6
2139
Female, age 85, right hemisphere
485.9
2792
Male, age 76, both hemispheres
471.2
2013
Male, age 80, both hemispheres
423.7
2790
Male, age 61, both hemispheres
409.7
Lateral vestibular nucleus nTPM: 472.5
2184
Male, age 76, both hemispheres
482.4
2311
Male, age 80, both hemispheres
462.7
Locus coeruleus nTPM: 527.2
2123
Female, age 91, both hemispheres
599.5
2317
Female, age 72, unknown
562.7
2014
Male, age 55, unknown
543.9
2720
Male, age 74, both hemispheres
536.1
2162
Male, age 80, both hemispheres
505.4
1980
Male, age 76, both hemispheres
502.6
2788
Male, age 74, unknown
440.5
Medial parabrachial nucleus nTPM: 505.6
2170
Female, age 91, both hemispheres
633.9
2463
Female, age 85, right hemisphere
612.3
2156
Male, age 61, both hemispheres
465.4
2786
Male, age 76, both hemispheres
426.7
2854
Male, age 80, both hemispheres
389.7
Medial periolivary nuclei nTPM: 420.0
2063
Male, age 76, both hemispheres
523.0
2171
Female, age 85, both hemispheres
431.7
2791
Male, age 74, right hemisphere
398.4
2081
Male, age 80, both hemispheres
375.8
2458
Female, age 91, both hemispheres
371.1
Motor facial nucleus nTPM: 420.7
2062
Male, age 76, both hemispheres
557.9
2126
Male, age 61, both hemispheres
474.8
2365
Male, age 74, right hemisphere
408.3
2795
Female, age 91, both hemispheres
387.7
2697
Female, age 85, both hemispheres
375.0
2327
Male, age 80, both hemispheres
320.7
Motor trigeminal nucleus nTPM: 416.4
2309
Male, age 76, both hemispheres
450.4
2335
Male, age 61, both hemispheres
434.2
2560
Male, age 74, both hemispheres
429.2
2079
Male, age 80, both hemispheres
393.0
2321
Female, age 91, both hemispheres
375.4
Nuclei of the trapezoid body nTPM: 442.4
1983
Male, age 76, both hemispheres
564.8
2159
Male, age 61, both hemispheres
465.6
2735
Female, age 85, both hemispheres
408.8
2166
Male, age 80, both hemispheres
396.5
2368
Female, age 91, both hemispheres
376.2
Nucleus raphe magnus nTPM: 402.2
2160
Male, age 61, both hemispheres
449.4
2455
Male, age 74, both hemispheres
433.2
2459
Female, age 91, both hemispheres
391.5
2051
Male, age 76, both hemispheres
389.3
2328
Male, age 80, both hemispheres
375.3
2172
Female, age 85, both hemispheres
374.4
Paramedian reticular nucleus nTPM: 453.0
2057
Male, age 80, both hemispheres
551.3
2313
Male, age 61, both hemispheres
455.6
2050
Female, age 85, both hemispheres
454.9
2052
Male, age 76, both hemispheres
350.0
Pedunculopontine tegmental nucleus nTPM: 481.9
2334
Male, age 80, both hemispheres
531.4
1921
Female, age 85, both hemispheres
517.9
2338
Male, age 61, both hemispheres
396.5
Pontine nuclei nTPM: 472.3
1863
Male, age 55, unknown
549.0
2109
Female, age 72, unknown
527.1
2454
Male, age 74, left hemisphere
501.2
1968
Male, age 76, left hemisphere
493.8
2319
Female, age 91, both hemispheres
455.6
2787
Female, age 85, both hemispheres
436.6
2727
Male, age 61, right hemisphere
433.7
2115
Male, age 80, left hemisphere
381.4
Pontine raphe nucleus nTPM: 475.0
2122
Female, age 85, midline
493.0
2853
Male, age 76, midline
457.0
Posteroventral cochlear nucleus nTPM: 470.5
2371
Male, age 61, both hemispheres
501.9
2752
Female, age 85, both hemispheres
501.1
2135
Female, age 91, both hemispheres
468.1
2070
Male, age 76, both hemispheres
463.5
2341
Male, age 80, both hemispheres
418.1
Principal sensory trigeminal nucleus nTPM: 419.4
2158
Male, age 61, both hemispheres
482.7
2324
Male, age 76, both hemispheres
448.9
2367
Female, age 91, left hemisphere
391.4
2008
Male, age 80, left hemisphere
354.8
Reticular pontine nucleus, caudal nTPM: 439.9
2092
Male, age 76, both hemispheres
512.0
2559
Male, age 74, both hemispheres
494.4
2457
Female, age 91, both hemispheres
400.6
2332
Male, age 80, right hemisphere
352.8
Reticular pontine nucleus, oral nTPM: 475.7
1939
Male, age 80, both hemispheres
543.9
2167
Male, age 76, both hemispheres
515.9
2012
Female, age 85, both hemispheres
466.7
2366
Female, age 91, both hemispheres
429.8
2361
Male, age 74, both hemispheres
422.0
Reticulotegmental nucleus nTPM: 469.0
2452
Male, age 74, both hemispheres
521.9
2322
Female, age 91, both hemispheres
471.5
2325
Male, age 76, both hemispheres
464.8
2333
Male, age 80, both hemispheres
418.0
Spinal trigeminal nucleus, oral nTPM: 443.3
2164
Male, age 80, both hemispheres
448.0
2737
Female, age 85, both hemispheres
444.0
1978
Male, age 76, both hemispheres
438.0
Subcoeruleus area nTPM: 485.7
2451
Male, age 74, both hemispheres
573.6
2369
Female, age 85, left hemisphere
563.7
2323
Female, age 91, left hemisphere
459.6
1958
Male, age 80, both hemispheres
420.1
2089
Male, age 76, left hemisphere
411.7
Superior olive nTPM: 401.3
2020
Male, age 76, both hemispheres
443.0
2364
Male, age 74, right hemisphere
432.0
1875
Female, age 85, both hemispheres
406.6
2329
Male, age 80, right hemisphere
374.5
2561
Female, age 91, both hemispheres
350.5
Ventral periolivary nuclei nTPM: 395.3
2023
Male, age 76, both hemispheres
459.6
2165
Male, age 80, both hemispheres
417.0
2130
Female, age 85, both hemispheres
398.7
2794
Female, age 91, left hemisphere
305.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 418.9
2359
Male, age 61, both hemispheres
469.6
2456
Female, age 91, both hemispheres
429.2
1959
Male, age 76, both hemispheres
420.3
2449
Male, age 74, both hemispheres
408.5
2840
Female, age 85, both hemispheres
398.2
2161
Male, age 80, both hemispheres
387.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
819.7
Pig sample
Sample description
nTPM
Pons nTPM: 819.7
Samples: 4
Max nTPM: 1093.0
Min nTPM: 499.3
Sample A
Female
1093.0
Sample B
Female
499.3
Sample C
Male
761.6
Sample D
Male
924.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
