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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GRINA is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
234.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
785.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
500.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
451.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
417.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
390.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
369.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
364.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
355.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
341.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
339.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
305.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
293.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
290.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
288.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
275.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
270.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
268.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
259.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
255.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
253.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
252.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
250.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
250.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
233.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
233.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
227.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
226.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
222.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
221.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
211.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
209.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
208.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
208.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
206.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
200.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
199.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
196.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
195.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
194.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
194.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
194.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
189.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
188.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
187.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
179.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
177.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
176.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
168.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
165.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
161.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
161.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
159.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
157.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
153.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
152.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
149.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
146.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
137.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
126.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
106.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
104.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
101.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
87.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GRINA is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
219.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
804.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
592.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
580.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
497.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
496.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
492.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
490.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
478.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
471.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
468.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
459.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
441.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
439.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
438.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
431.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
422.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
418.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
390.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
375.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
371.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
366.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
364.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
362.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
361.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
357.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
356.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
355.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
351.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
348.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
345.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
345.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
344.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
342.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
341.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
340.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
336.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
333.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
332.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
330.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
329.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
324.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
322.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
322.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
320.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
320.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
319.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
316.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
315.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
314.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
314.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
314.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
312.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
309.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
308.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
307.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
302.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
301.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
301.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
300.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
298.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
298.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
297.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
296.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
295.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
295.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
293.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
291.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
291.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
291.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
290.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
289.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
288.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
287.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
287.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
287.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
286.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
286.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
286.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
284.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
283.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
282.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
282.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
282.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
281.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
280.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
280.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
280.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
279.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
276.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
276.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
274.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
274.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
274.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
274.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
272.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
271.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
270.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
269.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
269.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
268.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
268.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
268.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
268.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
267.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
267.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
266.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
266.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
266.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
266.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
264.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
264.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
263.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
262.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
262.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
262.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
261.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
261.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
260.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
260.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
260.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
260.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
258.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
258.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
258.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
258.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
257.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
257.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
257.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
257.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
256.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
256.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
255.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
255.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
255.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
255.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
254.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
254.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
253.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
253.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
253.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
253.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
252.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
252.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
252.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
252.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
251.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
251.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
251.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
250.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
249.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
249.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
249.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
249.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
249.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
249.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
248.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
248.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
247.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
247.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
247.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
246.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
245.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
245.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
245.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
244.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
244.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
244.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
243.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
243.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
242.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
242.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
242.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
242.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
241.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
241.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
241.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
241.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
241.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
240.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
240.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
239.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
239.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
239.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
239.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
239.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
239.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
238.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
238.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
237.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
237.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
237.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
237.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
237.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
235.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
235.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
234.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
234.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
233.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
232.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
232.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
231.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
231.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
230.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
230.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
229.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
229.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
229.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
229.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
229.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
228.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
228.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
228.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
227.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
227.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
227.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
226.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
225.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
225.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
224.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
224.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
224.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
224.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
224.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
223.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
223.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
223.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
223.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
222.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
222.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
222.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
222.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
221.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
221.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
220.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
220.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
220.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
220.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
220.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
220.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
219.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
219.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
219.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
218.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
218.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
218.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
217.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
217.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
217.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
217.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
217.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
216.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
216.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
216.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
216.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
215.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
215.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
215.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
215.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
214.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
214.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
214.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
214.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
214.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
214.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
213.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
213.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
213.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
212.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
212.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
212.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
212.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
212.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
212.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
211.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
211.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
211.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
211.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
211.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
210.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
210.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
210.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
210.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
210.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
209.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
208.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
208.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
207.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
206.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
206.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
206.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
206.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
206.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
206.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
204.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
203.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
202.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
202.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
202.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
202.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
202.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
201.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
201.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
201.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
200.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
200.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
200.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
200.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
199.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
198.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
198.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
198.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
197.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
197.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
196.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
196.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
196.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
195.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
194.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
194.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
194.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
194.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
194.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
194.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
194.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
193.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
193.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
193.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
193.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
193.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
192.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
192.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
192.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
191.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
191.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
190.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
190.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
189.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
189.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
189.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
187.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
187.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
187.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
186.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
186.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
186.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
185.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
185.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
184.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
184.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
184.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
184.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
183.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
183.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
182.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
182.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
182.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
182.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
182.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
181.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
181.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
181.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
181.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
180.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
180.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
179.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
179.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
178.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
178.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
178.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
176.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
176.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
176.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
176.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
175.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
174.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
174.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
173.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
172.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
172.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
171.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
171.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
171.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
171.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
170.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
170.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
170.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
169.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
169.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
169.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
169.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
168.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
168.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
168.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
168.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
167.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
166.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
166.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
165.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
164.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
164.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
164.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
163.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
162.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
161.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
161.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
160.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
160.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
160.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
160.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
159.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
158.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
158.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
158.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
157.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
156.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
155.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
155.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
153.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
153.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
153.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
152.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
151.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
151.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
151.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
150.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
150.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
149.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
149.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
149.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
148.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
148.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
147.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
146.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
146.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
146.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
145.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
144.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
144.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
143.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
142.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
141.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
141.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
141.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
140.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
140.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
138.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
137.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
136.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
136.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
135.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
135.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
135.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
133.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
133.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
133.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
133.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
132.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
131.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
130.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
130.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
129.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
128.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
128.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
127.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
127.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
126.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
126.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
126.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
125.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
125.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
124.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
124.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
124.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
123.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
122.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
120.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
119.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
117.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
115.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
114.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
114.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
114.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
114.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
113.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
111.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
110.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
110.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
109.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
109.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
108.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
107.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
106.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
105.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
105.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
102.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
101.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
100.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
100.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
100.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
100.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
99.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
99.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
96.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
96.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
93.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
88.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
87.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
86.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
81.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
80.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
79.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
79.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
76.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
74.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
70.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
66.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
60.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
45.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
43.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
34.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GRINA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
184.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
383.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
378.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
369.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
351.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
350.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
344.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
340.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
324.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
286.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
265.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
257.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
254.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
249.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
244.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
240.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
236.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
226.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
225.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
225.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
224.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
223.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
222.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
221.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
216.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
215.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
213.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
209.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
208.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
208.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
199.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
198.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
193.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
192.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
192.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
191.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
191.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
189.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
188.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
188.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
188.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
186.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
185.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
184.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
181.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
180.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
179.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
178.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
175.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
174.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
173.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
172.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
171.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
171.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
169.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
168.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
166.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
163.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
163.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
160.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
157.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
156.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
154.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
152.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
151.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
149.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
147.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
147.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
146.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
145.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
143.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
140.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
139.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
139.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
138.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
137.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
136.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
134.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
132.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
131.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
131.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
130.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
129.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
127.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
125.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
124.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
124.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
123.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
122.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
121.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
117.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
115.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
114.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
111.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
110.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
105.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
104.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
103.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
89.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
86.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GRINA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
247.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
948.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
744.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
716.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
651.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
610.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
560.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
554.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
539.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
535.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
510.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
502.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
498.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
497.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
484.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
475.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
468.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
454.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
426.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
425.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
423.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
412.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
411.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
404.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
390.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
389.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
388.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
385.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
384.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
384.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
383.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
379.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
378.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
375.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
374.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
373.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
371.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
367.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
366.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
364.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
357.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
355.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
355.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
354.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
354.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
353.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
339.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
337.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
326.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
325.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
325.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
324.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
318.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
318.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
314.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
313.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
312.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
309.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
308.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
304.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
304.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
301.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
301.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
298.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
298.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
298.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
297.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
296.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
296.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
295.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
294.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
294.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
293.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
293.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
292.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
291.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
291.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
290.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
290.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
289.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
289.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
287.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
285.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
283.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
282.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
279.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
278.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
278.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
277.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
275.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
275.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
271.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
270.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
269.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
267.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
266.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
265.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
265.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
265.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
264.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
259.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
259.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
259.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
257.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
256.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
255.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
254.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
254.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
249.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
248.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
248.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
247.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
246.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
246.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
245.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
245.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
245.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
243.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
242.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
242.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
241.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
241.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
241.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
234.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
234.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
232.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
232.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
231.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
230.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
230.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
229.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
227.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
226.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
225.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
225.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
225.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
225.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
223.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
223.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
222.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
220.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
219.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
217.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
217.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
216.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
216.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
216.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
215.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
215.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
213.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
213.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
212.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
211.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
211.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
210.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
210.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
209.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
209.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
208.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
206.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
205.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
203.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
202.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
200.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
200.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
200.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
199.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
199.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
198.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
198.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
198.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
197.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
196.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
196.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
195.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
195.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
195.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
194.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
194.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
194.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
194.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
193.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
193.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
192.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
191.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
189.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
189.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
189.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
188.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
188.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
187.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
187.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
186.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
185.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
184.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
183.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
182.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
181.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
181.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
179.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
179.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
178.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
178.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
177.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
177.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
176.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
176.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
175.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
175.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
173.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
170.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
170.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
169.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
168.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
168.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
168.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
168.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
168.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
167.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
166.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
166.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
165.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
164.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
162.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
162.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
161.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
160.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
159.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
158.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
157.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
157.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
157.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
157.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
157.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
156.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
156.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
153.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
153.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
152.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
152.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
151.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
150.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
148.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
148.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
145.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
145.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
144.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
141.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
141.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
140.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
140.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
139.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
139.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
138.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
138.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
138.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
137.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
134.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
133.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
130.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
127.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
124.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
123.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
123.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
119.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
118.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
118.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
118.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
117.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
116.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
115.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
113.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
110.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
109.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
105.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
103.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
93.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
92.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
89.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
83.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
81.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
75.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
51.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
