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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GRINA is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
326.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1109.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
982.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
954.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
952.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
873.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
872.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
862.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
768.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
755.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
749.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
738.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
735.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
727.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
703.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
695.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
693.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
691.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
666.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
664.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
651.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
649.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
647.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
639.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
637.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
631.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
613.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
613.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
611.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
597.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
592.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
588.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
586.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
580.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
580.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
578.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
575.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
573.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
569.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
558.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
554.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
552.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
547.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
546.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
540.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
537.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
532.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
531.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
529.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
521.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
521.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
520.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
519.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
519.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
516.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
506.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
504.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
496.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
488.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
485.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
484.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
481.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
477.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
476.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
474.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
474.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
473.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
470.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
467.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
467.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
467.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
466.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
465.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
459.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
456.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
453.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
447.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
436.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
434.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
432.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
429.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
428.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
421.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
417.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
416.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
415.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
414.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
412.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
410.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
408.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
405.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
405.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
403.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
402.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
402.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
402.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
401.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
400.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
398.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
398.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
392.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
391.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
391.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
391.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
390.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
389.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
388.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
385.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
381.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
377.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
376.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
373.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
372.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
371.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
370.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
370.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
369.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
368.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
367.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
367.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
367.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
363.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
362.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
360.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
359.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
358.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
358.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
355.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
353.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
348.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
348.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
347.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
346.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
345.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
344.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
342.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
338.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
337.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
335.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
333.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
332.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
331.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
331.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
330.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
328.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
326.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
326.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
326.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
326.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
325.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
325.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
323.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
320.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
318.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
317.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
317.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
314.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
314.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
314.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
312.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
312.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
309.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
309.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
308.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
304.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
302.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
301.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
300.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
299.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
298.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
297.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
296.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
296.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
294.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
292.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
289.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
289.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
287.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
287.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
286.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
285.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
284.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
283.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
282.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
282.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
281.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
279.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
278.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
276.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
276.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
275.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
274.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
274.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
273.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
272.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
272.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
271.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
270.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
269.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
265.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
263.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
263.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
262.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
260.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
260.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
260.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
260.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
259.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
259.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
258.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
257.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
256.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
256.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
255.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
255.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
255.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
254.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
254.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
254.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
252.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
249.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
249.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
246.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
246.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
244.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
244.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
244.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
244.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
242.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
240.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
236.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
236.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
234.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
233.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
230.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
230.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
229.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
229.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
227.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
227.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
225.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
225.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
225.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
224.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
224.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
224.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
223.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
223.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
222.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
222.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
221.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
221.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
221.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
219.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
218.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
218.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
215.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
213.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
212.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
212.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
211.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
210.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
209.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
208.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
208.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
207.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
206.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
206.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
206.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
205.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
204.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
202.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
201.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
201.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
201.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
201.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
200.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
199.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
199.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
198.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
191.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
189.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
189.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
189.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
188.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
187.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
187.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
186.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
186.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
186.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
185.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
185.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
185.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
183.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
182.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
182.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
180.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
180.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
177.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
175.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
173.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
171.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
169.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
168.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
167.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
167.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
166.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
166.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
166.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
164.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
164.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
162.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
162.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
161.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
161.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
160.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
160.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
160.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
159.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
157.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
152.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
151.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
150.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
150.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
150.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
150.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
149.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
149.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
144.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
142.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
142.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
141.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
140.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
140.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
136.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
134.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
134.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
133.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
132.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
131.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
131.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
127.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
125.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
121.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
117.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
115.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
113.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
112.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
112.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
109.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
107.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
106.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
103.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
97.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
96.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
94.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
93.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
85.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
81.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
78.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
75.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
61.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GRINA is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
215.7
Number of samples
231
Samples
Sample
Description
TPM
DO48672
0 years, male, NA, stage:2, alive, 450 days
966.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
934.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
633.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
588.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
577.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
566.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
543.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
540.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
535.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
534.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
533.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
528.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
497.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
494.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
488.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
484.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
465.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
456.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
431.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
403.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
399.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
397.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
396.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
395.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
380.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
374.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
366.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
356.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
352.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
351.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
349.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
345.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
340.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
339.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
335.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
333.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
330.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
330.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
329.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
326.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
310.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
299.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
295.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
295.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
294.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
294.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
294.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
294.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
291.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
291.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
289.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
287.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
284.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
281.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
278.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
275.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
274.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
273.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
269.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
268.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
261.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
260.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
260.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
259.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
256.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
252.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
251.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
246.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
243.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
243.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
242.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
238.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
238.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
236.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
235.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
228.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
228.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
227.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
227.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
226.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
226.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
221.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
221.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
221.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
219.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
215.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
213.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
213.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
212.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
211.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
209.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
209.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
208.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
201.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
201.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
200.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
199.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
197.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
196.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
192.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
191.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
190.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
189.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
188.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
188.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
185.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
184.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
179.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
179.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
177.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
177.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
176.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
175.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
175.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
175.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
174.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
174.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
172.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
172.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
171.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
168.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
164.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
163.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
162.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
162.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
160.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
160.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
159.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
158.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
158.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
154.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
154.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
154.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
153.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
153.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
152.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
152.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
151.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
150.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
149.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
147.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
147.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
146.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
145.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
144.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
144.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
143.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
141.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
140.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
140.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
139.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
138.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
138.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
138.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
137.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
136.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
136.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
135.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
135.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
134.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
133.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
133.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
131.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
130.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
129.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
128.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
128.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
127.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
126.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
126.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
126.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
125.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
125.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
123.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
122.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
122.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
121.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
118.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
117.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
116.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
116.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
115.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
113.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
112.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
111.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
111.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
109.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
109.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
108.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
108.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
106.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
105.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
105.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
105.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
105.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
102.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
102.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
101.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
100.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
99.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
98.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
98.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
96.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
95.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
95.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
93.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
92.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
90.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
90.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
90.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
89.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
88.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
87.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
86.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
85.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
84.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
83.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
83.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
83.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
81.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
79.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
76.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
76.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
74.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
73.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
73.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
63.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
59.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
48.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
32.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
27.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
