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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
161.2
nTPM
GTEx:
161.2
nTPM
FANTOM5:
14.5
Scaled Tags Per Million
Pig:
85.3
nTPM
Mouse:
59.5
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
161.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 161.2
Samples: 105
Max nTPM: 266.1
Min nTPM: 93.9
Std nTPM: 38.2
Median nTPM:
415_1
77 years, female
266.1
414_1
84 years, female
246.2
229_1
69 years, female
245.3
307_1
66 years, female
242.6
389_1
86 years, female
230.5
425_1
59 years, female
228.4
495_1
57 years, female
225.0
246_1
77 years, male
224.2
126_1
63 years, male
222.6
266_1
85 years, male
221.5
162_1
79 years, female
216.6
376_1
75 years, female
215.0
324_1
76 years, male
214.9
142_1
61 years, female
210.2
293_1
68 years, female
209.5
172_1
72 years, female
204.7
490_1
67 years, female
200.8
499_1
55 years, female
200.7
468_1
89 years, male
200.6
480_1
63 years, male
198.3
217_1
76 years, male
196.1
218_1
71 years, female
194.9
149_1
88 years, male
188.8
384_1
83 years, male
188.6
526_1
61 years, male
188.1
518_1
75 years, female
184.8
251_1
78 years, male
183.0
466_1
57 years, female
181.3
491_1
89 years, female
180.6
292_1
71 years, male
179.7
447_1
81 years, male
178.4
355_1
70 years, female
177.9
286_1
68 years, female
176.6
375_1
74 years, female
174.7
237_1
82 years, male
173.9
321_1
62 years, female
171.3
347_1
72 years, male
171.2
335_1
73 years, female
170.8
139_1
64 years, female
170.2
153_1
70 years, female
170.2
2_1
77 years, female
169.4
352_1
62 years, male
168.0
137_1
83 years, male
167.8
9_1
66 years, female
167.4
313_1
79 years, female
167.0
413_1
59 years, female
166.0
119_1
70 years, female
164.8
43_1
64 years, female
164.7
315_1
62 years, female
163.9
115_1
83 years, male
163.2
243_1
75 years, male
159.9
311_1
78 years, male
159.1
316_1
62 years, male
158.8
117_1
61 years, male
158.3
89_1
63 years, male
157.0
81_1
67 years, male
156.3
32_1
67 years, male
155.2
394_1
75 years, female
154.1
163_1
78 years, male
153.8
404_1
82 years, female
153.8
35_1
74 years, female
153.1
177_1
74 years, male
152.4
318_1
68 years, male
151.0
503_1
68 years, male
149.9
6_1
73 years, female
148.7
379_1
60 years, male
147.4
291_1
76 years, male
145.9
353_1
82 years, female
143.8
18_1
88 years, male
143.0
377_1
82 years, female
141.7
17_1
71 years, male
141.4
386_1
76 years, male
140.8
322_1
76 years, male
137.7
319_1
81 years, male
134.4
405_1
91 years, male
133.9
265_1
87 years, male
133.3
396_1
62 years, male
130.3
99_1
64 years, male
129.1
42_1
85 years, male
128.3
350_1
84 years, female
128.3
354_1
81 years, female
128.1
317_1
60 years, male
127.8
189_1
76 years, male
127.3
254_1
77 years, female
123.6
356_1
87 years, female
123.6
349_1
83 years, male
123.0
288_1
66 years, female
121.4
517_1
88 years, male
119.4
145_1
84 years, male
119.3
314_1
67 years, male
118.9
406_1
79 years, male
118.8
348_1
84 years, male
116.1
120_1
70 years, female
113.5
109_1
81 years, female
112.9
308_1
70 years, female
111.8
501_1
88 years, male
111.2
351_1
91 years, male
110.8
173_1
67 years, male
109.5
41_1
94 years, female
107.9
320_1
89 years, female
107.4
264_1
73 years, female
106.7
295_1
61 years, female
104.9
452_1
88 years, female
103.5
506_1
65 years, male
98.8
4_1
88 years, female
93.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
