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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
311.7
nTPM
FANTOM5:
13.6
Scaled Tags Per Million
Pig:
95.5
nTPM
Allen mouse:
2.5
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
311.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 284.6
1984
Male, age 76, both hemispheres
340.9
2188
Female, age 91, both hemispheres
282.3
2301
Female, age 85, both hemispheres
272.8
2090
Male, age 80, both hemispheres
242.3
Dorsal cochlear nucleus nTPM: 238.8
2187
Female, age 91, both hemispheres
279.7
2058
Male, age 76, both hemispheres
234.7
2802
Male, age 74, right hemisphere
231.4
2370
Male, age 61, both hemispheres
225.1
2378
Male, age 80, both hemispheres
223.2
Dorsal tegmental nucleus nTPM: 242.3
1936
Male, age 76, left hemisphere
258.6
2083
Male, age 80, both hemispheres
254.7
2326
Male, age 74, both hemispheres
245.8
2358
Male, age 61, both hemispheres
209.8
Dorsolateral tegmental area nTPM: 238.3
2360
Male, age 74, both hemispheres
266.6
2654
Male, age 80, both hemispheres
243.3
2141
Male, age 76, both hemispheres
234.1
2751
Female, age 85, both hemispheres
227.2
2337
Male, age 61, both hemispheres
220.3
Kolliker-Fuse nucleus nTPM: 311.7
2315
Male, age 76, right hemisphere
467.9
2793
Female, age 91, left hemisphere
245.2
2163
Male, age 80, both hemispheres
221.9
Lateral lemniscal nuclei nTPM: 248.1
2746
Female, age 85, left hemisphere
270.8
2169
Male, age 76, both hemispheres
255.6
2036
Male, age 80, both hemispheres
243.4
2453
Male, age 74, right hemisphere
240.9
2320
Female, age 91, left hemisphere
229.9
Lateral parabrachial nucleus nTPM: 300.9
2139
Female, age 85, right hemisphere
386.3
2792
Male, age 76, both hemispheres
314.7
2013
Male, age 80, both hemispheres
296.3
2790
Male, age 61, both hemispheres
206.4
Lateral vestibular nucleus nTPM: 233.9
2311
Male, age 80, both hemispheres
246.3
2184
Male, age 76, both hemispheres
221.5
Locus coeruleus nTPM: 257.3
2788
Male, age 74, unknown
291.6
2123
Female, age 91, both hemispheres
285.3
2014
Male, age 55, unknown
273.4
2317
Female, age 72, unknown
266.8
1980
Male, age 76, both hemispheres
230.6
2162
Male, age 80, both hemispheres
229.7
2720
Male, age 74, both hemispheres
223.5
Medial parabrachial nucleus nTPM: 245.9
2463
Female, age 85, right hemisphere
289.5
2854
Male, age 80, both hemispheres
261.2
2170
Female, age 91, both hemispheres
256.7
2786
Male, age 76, both hemispheres
222.3
2156
Male, age 61, both hemispheres
199.6
Medial periolivary nuclei nTPM: 276.0
2171
Female, age 85, both hemispheres
304.4
2791
Male, age 74, right hemisphere
284.3
2063
Male, age 76, both hemispheres
272.6
2081
Male, age 80, both hemispheres
262.8
2458
Female, age 91, both hemispheres
255.7
Motor facial nucleus nTPM: 272.4
2795
Female, age 91, both hemispheres
313.9
2327
Male, age 80, both hemispheres
272.2
2062
Male, age 76, both hemispheres
269.3
2697
Female, age 85, both hemispheres
268.1
2365
Male, age 74, right hemisphere
257.7
2126
Male, age 61, both hemispheres
252.9
Motor trigeminal nucleus nTPM: 233.5
2079
Male, age 80, both hemispheres
274.3
2321
Female, age 91, both hemispheres
243.9
2335
Male, age 61, both hemispheres
226.0
2560
Male, age 74, both hemispheres
217.1
2309
Male, age 76, both hemispheres
206.1
Nuclei of the trapezoid body nTPM: 294.7
2735
Female, age 85, both hemispheres
315.4
2159
Male, age 61, both hemispheres
314.5
2368
Female, age 91, both hemispheres
293.9
2166
Male, age 80, both hemispheres
283.0
1983
Male, age 76, both hemispheres
266.7
Nucleus raphe magnus nTPM: 274.4
2160
Male, age 61, both hemispheres
300.8
2172
Female, age 85, both hemispheres
285.5
2328
Male, age 80, both hemispheres
282.9
2455
Male, age 74, both hemispheres
260.8
2051
Male, age 76, both hemispheres
259.7
2459
Female, age 91, both hemispheres
256.9
Paramedian reticular nucleus nTPM: 257.1
2052
Male, age 76, both hemispheres
287.6
2050
Female, age 85, both hemispheres
264.9
2057
Male, age 80, both hemispheres
240.4
2313
Male, age 61, both hemispheres
235.5
Pedunculopontine tegmental nucleus nTPM: 255.4
1921
Female, age 85, both hemispheres
274.9
2338
Male, age 61, both hemispheres
248.7
2334
Male, age 80, both hemispheres
242.5
Pontine nuclei nTPM: 261.9
1863
Male, age 55, unknown
312.7
2109
Female, age 72, unknown
303.1
2727
Male, age 61, right hemisphere
278.7
2787
Female, age 85, both hemispheres
261.4
2115
Male, age 80, left hemisphere
256.5
1968
Male, age 76, left hemisphere
248.6
2319
Female, age 91, both hemispheres
227.5
2454
Male, age 74, left hemisphere
206.5
Pontine raphe nucleus nTPM: 240.0
2122
Female, age 85, midline
257.7
2853
Male, age 76, midline
222.2
Posteroventral cochlear nucleus nTPM: 252.7
2752
Female, age 85, both hemispheres
269.3
2070
Male, age 76, both hemispheres
257.2
2135
Female, age 91, both hemispheres
253.6
2341
Male, age 80, both hemispheres
247.6
2371
Male, age 61, both hemispheres
235.9
Principal sensory trigeminal nucleus nTPM: 262.0
2158
Male, age 61, both hemispheres
304.5
2008
Male, age 80, left hemisphere
274.8
2324
Male, age 76, both hemispheres
238.3
2367
Female, age 91, left hemisphere
230.3
Reticular pontine nucleus, caudal nTPM: 250.6
2092
Male, age 76, both hemispheres
279.7
2332
Male, age 80, right hemisphere
274.3
2457
Female, age 91, both hemispheres
254.3
2559
Male, age 74, both hemispheres
194.3
Reticular pontine nucleus, oral nTPM: 230.0
2366
Female, age 91, both hemispheres
257.1
2012
Female, age 85, both hemispheres
251.4
1939
Male, age 80, both hemispheres
242.4
2167
Male, age 76, both hemispheres
214.7
2361
Male, age 74, both hemispheres
184.7
Reticulotegmental nucleus nTPM: 241.8
2322
Female, age 91, both hemispheres
265.3
2333
Male, age 80, both hemispheres
254.5
2325
Male, age 76, both hemispheres
235.3
2452
Male, age 74, both hemispheres
212.1
Spinal trigeminal nucleus, oral nTPM: 226.3
2737
Female, age 85, both hemispheres
252.3
1978
Male, age 76, both hemispheres
217.4
2164
Male, age 80, both hemispheres
209.1
Subcoeruleus area nTPM: 237.1
1958
Male, age 80, both hemispheres
266.3
2089
Male, age 76, left hemisphere
248.0
2451
Male, age 74, both hemispheres
225.9
2369
Female, age 85, left hemisphere
225.5
2323
Female, age 91, left hemisphere
219.8
Superior olive nTPM: 265.6
1875
Female, age 85, both hemispheres
286.6
2329
Male, age 80, right hemisphere
265.3
2364
Male, age 74, right hemisphere
264.4
2020
Male, age 76, both hemispheres
255.9
2561
Female, age 91, both hemispheres
255.9
Ventral periolivary nuclei nTPM: 281.0
2130
Female, age 85, both hemispheres
331.8
2165
Male, age 80, both hemispheres
286.0
2023
Male, age 76, both hemispheres
260.3
2794
Female, age 91, left hemisphere
246.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 257.1
2161
Male, age 80, both hemispheres
270.6
1959
Male, age 76, both hemispheres
267.1
2840
Female, age 85, both hemispheres
257.1
2456
Female, age 91, both hemispheres
253.1
2449
Male, age 74, both hemispheres
252.8
2359
Male, age 61, both hemispheres
242.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
95.5
Pig sample
Sample description
nTPM
Pons nTPM: 95.6
Samples: 4
Max nTPM: 110.9
Min nTPM: 84.6
Sample A
Female
110.9
Sample B
Female
84.6
Sample C
Male
89.2
Sample D
Male
97.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
