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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM20 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
202.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
144.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
95.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
73.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
73.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
70.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
70.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
70.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
68.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
68.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
68.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
62.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
62.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
62.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
58.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
56.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
55.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
52.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
52.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
52.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
52.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
50.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
50.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
49.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
49.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
44.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
43.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
43.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
41.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
39.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
39.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
38.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
37.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
36.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
36.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
33.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
27.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
26.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
24.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
23.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM20 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
113.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
357.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
351.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
297.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
292.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
273.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
251.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
247.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
229.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
229.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
225.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
221.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
221.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
220.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
218.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
218.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
218.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
216.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
213.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
213.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
212.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
211.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
210.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
209.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
208.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
205.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
203.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
202.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
200.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
200.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
198.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
198.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
198.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
197.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
196.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
196.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
195.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
195.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
194.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
194.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
193.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
191.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
189.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
188.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
187.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
187.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
187.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
186.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
186.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
186.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
184.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
184.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
183.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
182.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
182.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
180.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
180.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
180.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
180.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
179.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
179.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
179.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
178.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
178.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
178.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
178.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
178.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
177.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
177.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
176.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
176.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
176.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
176.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
174.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
173.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
173.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
171.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
170.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
170.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
170.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
169.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
169.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
169.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
169.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
168.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
168.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
168.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
167.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
167.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
166.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
166.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
165.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
163.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
162.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
162.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
161.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
161.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
161.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
161.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
160.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
160.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
159.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
159.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
159.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
158.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
158.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
158.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
157.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
157.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
154.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
153.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
152.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
152.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
152.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
151.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
151.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
150.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
150.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
150.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
149.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
149.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
149.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
149.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
148.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
148.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
147.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
147.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
147.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
147.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
147.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
146.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
146.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
146.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
145.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
145.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
145.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
145.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
145.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
144.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
144.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
144.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
143.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
143.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
143.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
143.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
141.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
140.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
140.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
140.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
139.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
139.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
138.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
138.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
138.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
137.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
137.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
137.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
136.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
136.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
136.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
135.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
135.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
135.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
135.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
134.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
134.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
133.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
133.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
133.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
133.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
133.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
133.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
133.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
133.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
133.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
132.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
131.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
131.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
131.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
131.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
130.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
130.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
130.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
130.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
130.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
130.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
129.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
129.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
129.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
129.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
129.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
129.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
128.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
128.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
128.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
127.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
127.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
127.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
127.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
126.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
126.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
126.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
126.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
125.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
125.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
124.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
124.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
124.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
124.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
124.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
124.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
123.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
123.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
123.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
122.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
122.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
122.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
122.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
121.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
121.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
121.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
121.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
121.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
120.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
120.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
119.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
119.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
119.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
119.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
119.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
119.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
117.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
117.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
116.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
116.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
116.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
115.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
115.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
115.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
114.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
114.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
114.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
114.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
113.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
113.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
113.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
112.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
112.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
112.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
112.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
111.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
111.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
110.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
110.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
110.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
109.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
109.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
109.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
109.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
109.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
109.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
108.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
108.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
108.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
108.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
108.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
108.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
108.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
108.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
107.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
107.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
107.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
107.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
107.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
107.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
106.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
106.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
106.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
106.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
106.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
105.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
104.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
104.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
104.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
103.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
103.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
103.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
103.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
102.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
102.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
102.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
101.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
100.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
100.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
100.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
99.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
99.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
99.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
99.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
99.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
99.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
99.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
98.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
98.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
97.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
97.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
97.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
96.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
96.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
95.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
95.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
95.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
95.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
94.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
94.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
94.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
93.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
93.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
93.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
93.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
92.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
92.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
92.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
91.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
91.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
90.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
90.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
89.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
89.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
89.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
89.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
88.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
88.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
87.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
87.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
87.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
86.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
86.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
86.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
86.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
86.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
86.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
86.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
86.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
86.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
85.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
85.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
85.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
84.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
84.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
84.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
84.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
84.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
83.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
82.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
81.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
81.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
81.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
81.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
81.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
81.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
80.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
80.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
80.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
80.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
80.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
80.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
79.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
78.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
78.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
78.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
78.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
77.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
77.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
77.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
76.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
76.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
75.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
75.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
74.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
74.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
74.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
73.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
72.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
72.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
72.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
72.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
72.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
72.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
71.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
71.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
71.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
70.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
70.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
70.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
70.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
69.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
69.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
69.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
69.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
69.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
69.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
69.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
68.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
68.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
68.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
68.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
68.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
68.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
67.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
66.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
66.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
66.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
66.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
66.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
65.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
65.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
65.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
65.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
65.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
65.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
65.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
64.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
64.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
63.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
63.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
63.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
63.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
62.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
62.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
62.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
62.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
62.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
62.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
62.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
62.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
62.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
61.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
61.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
61.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
60.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
60.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
59.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
57.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
57.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
57.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
57.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
57.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
57.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
57.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
54.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
54.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
54.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
54.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
54.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
54.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
54.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
52.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
51.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
51.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
51.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
51.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
50.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
50.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
50.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
49.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
49.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
48.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
48.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
47.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
47.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
47.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
46.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
46.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
45.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
44.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
44.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
44.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
43.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
43.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
43.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
42.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
42.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
40.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
39.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
38.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
38.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
36.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
36.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
36.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
35.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
34.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
34.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
34.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
34.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
32.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
32.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
30.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
29.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
29.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
27.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
25.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
25.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
24.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
21.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM20 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
135.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
248.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
242.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
227.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
223.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
222.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
202.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
198.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
193.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
192.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
190.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
187.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
185.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
185.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
182.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
181.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
180.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
180.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
176.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
176.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
172.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
170.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
166.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
166.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
164.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
163.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
161.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
160.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
159.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
159.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
159.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
158.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
158.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
157.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
157.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
156.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
155.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
151.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
150.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
150.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
148.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
147.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
147.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
146.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
144.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
144.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
144.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
143.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
139.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
138.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
135.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
134.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
133.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
132.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
130.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
130.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
127.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
126.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
125.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
123.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
121.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
120.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
120.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
119.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
116.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
116.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
112.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
112.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
111.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
109.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
108.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
106.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
106.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
105.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
105.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
105.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
102.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
100.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
99.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
99.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
98.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
95.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
93.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
92.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
91.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
90.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
88.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
84.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
83.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
83.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
74.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
73.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
72.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
72.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
69.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
67.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
64.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
59.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
51.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM20 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
191.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
179.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
178.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
177.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
166.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
166.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
159.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
145.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
139.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
133.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
131.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
126.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
122.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
122.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
120.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
117.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
114.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
114.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
113.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
113.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
113.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
112.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
110.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
109.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
105.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
105.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
103.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
101.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
101.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
97.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
97.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
97.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
96.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
95.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
94.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
94.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
94.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
93.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
93.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
93.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
92.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
92.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
91.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
90.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
89.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
88.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
88.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
88.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
87.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
86.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
86.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
86.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
85.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
85.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
85.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
84.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
84.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
84.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
83.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
83.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
82.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
81.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
81.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
81.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
81.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
81.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
80.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
80.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
79.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
79.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
79.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
77.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
76.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
76.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
76.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
76.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
76.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
75.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
75.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
75.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
75.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
75.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
75.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
75.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
74.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
74.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
74.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
73.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
73.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
72.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
72.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
72.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
72.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
71.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
71.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
71.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
70.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
70.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
70.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
69.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
69.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
69.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
69.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
69.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
69.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
68.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
68.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
68.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
68.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
68.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
67.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
67.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
67.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
66.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
65.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
65.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
65.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
65.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
64.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
64.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
64.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
64.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
63.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
63.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
63.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
63.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
62.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
62.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
62.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
62.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
62.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
62.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
62.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
61.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
61.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
61.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
61.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
61.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
61.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
60.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
60.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
60.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
60.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
59.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
59.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
58.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
58.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
58.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
58.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
58.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
58.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
58.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
58.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
57.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
57.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
57.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
57.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
57.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
57.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
56.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
56.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
56.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
55.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
55.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
55.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
55.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
55.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
54.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
54.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
53.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
53.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
53.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
52.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
52.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
52.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
51.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
51.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
51.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
51.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
50.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
50.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
49.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
49.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
49.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
49.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
48.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
48.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
48.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
48.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
48.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
48.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
47.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
47.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
47.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
46.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
46.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
46.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
45.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
44.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
44.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
44.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
44.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
44.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
43.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
43.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
43.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
43.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
43.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
42.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
42.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
42.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
41.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
41.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
41.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
41.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
41.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
40.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
40.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
39.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
39.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
39.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
39.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
38.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
37.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
36.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
36.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
36.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
36.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
36.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
35.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
34.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
34.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
32.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
32.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
31.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
31.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
31.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
31.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
30.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
29.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
29.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
28.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
28.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
26.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
26.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
26.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
25.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
23.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.1
CPT0078510003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0015730003
Tumor
0.9
CPT0012180003
Tumor
0.8
CPT0092290003
Tumor
0.7
CPT0001550001
Normal
0.6
CPT0065750003
Tumor
0.6
CPT0092800003
Normal
0.6
CPT0092740003
Normal
0.6
CPT0025290003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0088640003
Normal
0.5
CPT0086030003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0001510001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0089460004
Tumor
0.4
CPT0069010001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0079410003
Tumor
0.4
CPT0001350001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0007470001
Normal
0.4
CPT0065450001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0065820001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0066430001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0079000001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0001340003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0069000003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0078670001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0020130001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0078940001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0014470001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0001190001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0069160003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0084560003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0019130003
Tumor
-0.4
CPT0078840001
Normal
-0.4
CPT0001220008
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0014370004
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0010120001
Normal
-0.5
CPT0071150004
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0065930003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0079480003
Tumor
-0.6
CPT0089020003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0065870003
Tumor
-0.6
CPT0012080003
Tumor
-0.7
CPT0000640003
Tumor
-0.7
CPT0066480003
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0011410003
Tumor
-0.9
CPT0088550004
Tumor
-0.9
CPT0088760003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
