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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:42.2 nTPM
HPA Brain:67.3 nTPM
GTEx:42.2 nTPM
Pig:73.8 nTPM
Mouse:60.2 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 44.2
2226 Male, age 75, left hemisphere 63.0
1961 Female, age 42, unknown 25.5
Dorsomedial nucleus
nTPM: 41.4
2041 Female, age 72, unknown 46.7
1989 Male, age 62, unknown 45.1
2017 Female, age 42, unknown 32.5
Lateral hypothalamic area
nTPM: 60.4
2271 Male, age 75, both hemispheres 118.3
2412 Male, age 62, unknown 48.9
1791 Male, age 80, right hemisphere 42.1
2228 Male, age 66, unknown 32.1
Mammillary body
nTPM: 54.9
2413 Male, age 66, unknown 77.9
1834 Female, age 42, unknown 65.6
1945 Male, age 80, right hemisphere 50.3
1923 Female, age 72, unknown 42.8
1948 Female, age 72, unknown 37.9
Paraventricular nucleus
nTPM: 44.1
2700 Male, age 62, unknown 44.1
Preoptic area
nTPM: 26.9
2414 Female, age 72, unknown 34.4
1861 Female, age 42, unknown 31.2
1907 Male, age 80, right hemisphere 15.0
Supraoptic nucleus
nTPM: 67.3
2043 Male, age 62, unknown 84.5
1894 Female, age 72, unknown 72.1
2835 Female, age 72, unknown 45.4
Ventromedial nucleus
nTPM: 30.2
1982 Female, age 72, unknown 31.2
1822 Female, age 42, unknown 29.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 42.2
Samples: 257

Max nTPM: 283.4
Min nTPM: 2.8
Std nTPM: 42.2
Median nTPM: 29.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 283.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 272.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 249.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 188.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 178.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 174.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 173.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 162.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 156.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 141.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 122.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 122.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 115.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 114.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 109.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 108.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 108.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 108.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 107.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 104.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 104.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 98.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 97.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 96.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 96.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 95.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 93.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 92.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 90.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 88.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 86.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 81.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 80.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 80.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 78.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 74.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 74.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 74.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 73.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 73.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 71.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 71.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 70.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 68.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 66.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 66.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 63.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 63.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 63.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 60.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 59.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 59.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 58.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 58.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 57.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 56.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 55.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 55.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 54.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 53.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 53.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 53.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 52.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 51.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 50.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 49.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 49.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 49.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 48.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 47.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 47.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 46.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 45.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 45.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 45.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 45.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 44.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 44.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 44.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 43.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 42.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 41.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 41.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 41.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 40.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 40.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 39.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 39.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 38.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 38.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 38.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 38.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 37.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 37.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 37.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 37.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 37.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 36.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 36.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 36.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 36.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 36.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 35.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 35.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 34.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 34.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 34.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 34.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 32.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 32.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 32.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 32.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 31.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 31.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 31.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 30.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 30.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 30.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 30.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 30.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 29.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 29.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 29.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 29.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 29.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 29.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 28.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 28.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 28.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 28.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 28.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 28.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 27.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 27.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 27.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 27.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 27.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 27.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 26.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 26.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 26.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 26.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 25.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 25.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 24.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 23.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 23.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 23.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 23.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 23.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 22.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 22.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 22.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 22.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 21.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 21.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 21.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 21.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 21.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 21.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 20.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 20.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 20.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 20.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 19.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 19.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 19.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 19.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 19.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 19.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 19.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 19.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 18.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 18.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 18.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 17.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 17.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 17.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 17.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 17.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 17.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 16.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 16.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 16.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 16.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 16.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 16.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 15.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 15.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 15.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 14.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 14.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 14.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 14.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 14.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 14.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 14.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 13.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 13.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 13.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 13.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 13.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 13.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 13.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 12.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 12.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 12.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 12.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 12.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 12.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 12.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 12.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 11.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 11.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 11.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 11.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 11.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 11.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 11.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 11.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 11.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 10.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 10.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 10.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 9.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 9.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 9.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 9.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 9.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 9.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 8.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 8.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 8.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 7.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 7.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 7.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 7.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 5.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 5.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 5.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 5.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 5.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 4.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 3.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 3.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 73.8
Samples: 4

Max nTPM: 102.7
Min nTPM: 47.7
Sample A Female 102.7
Sample B Female 76.6
Sample C Male 68.0
Sample D Male 47.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 60.2
Samples: 4

Max nTPM: 68.7
Min nTPM: 48.4
Sample A Male 48.4
Sample B Male 68.7
Sample C Female 55.5
Sample D Female 68.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
77923147 Antisense, RP_070219_01_C12, Mouse strain C57BL/6J (56 days, male) 2.0
77371775 Antisense, RP_070116_01_D12, Mouse strain C57BL/6J (56 days, male) 1.5
68191456 Antisense, RP_041129_01_C02, Mouse strain C57BL/6J (56 days, male) 0.7

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