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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
43.4
nTPM
HPA Brain:
48.4
nTPM
GTEx:
43.4
nTPM
FANTOM5:
75.8
Scaled Tags Per Million
Pig:
35.7
nTPM
Mouse:
107.8
nTPM
Allen mouse:
2.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.4
Sample id
Sample description
nTPM
Amygdala nTPM: 48.4
2695
Female, age 67, right hemisphere
65.0
2514
Male, age 75, right hemisphere
55.6
1987
Female, age 91, left hemisphere
55.3
2814
Male, age 76, right hemisphere
40.0
2517
Female, age 94, left hemisphere
26.0
Basal amygdala nTPM: 22.5
2110
Male, age 80, left hemisphere
35.8
1955
Male, age 76, both hemispheres
28.1
2243
Female, age 91, right hemisphere
21.9
2685
Female, age 94, left hemisphere
19.3
2609
Male, age 75, right hemisphere
16.5
2827
Female, age 67, right hemisphere
13.3
Central amygdala nTPM: 27.0
1905
Male, age 76, both hemispheres
31.4
2515
Male, age 75, right hemisphere
30.1
2701
Female, age 91, right hemisphere
26.6
2826
Female, age 94, left hemisphere
23.6
2239
Male, age 80, left hemisphere
23.2
Corticomedial amygdala nTPM: 30.1
2428
Male, age 75, right hemisphere
42.8
2242
Female, age 91, right hemisphere
34.4
2829
Male, age 80, left hemisphere
28.4
2240
Male, age 76, both hemispheres
27.8
2429
Female, age 94, left hemisphere
27.0
2535
Female, age 67, right hemisphere
19.9
Lateral amygdala nTPM: 23.5
2256
Male, age 80, left hemisphere
38.7
1883
Male, age 76, both hemispheres
27.4
2534
Female, age 94, left hemisphere
25.2
2255
Female, age 91, right hemisphere
22.1
2830
Female, age 67, right hemisphere
16.4
2516
Male, age 75, right hemisphere
11.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
43.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 43.4
Samples: 152
Max nTPM: 246.8
Min nTPM: 1.3
Std nTPM: 45.5
Median nTPM: 26.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
246.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
211.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
208.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
203.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
161.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
150.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
146.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
133.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
133.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
131.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
127.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
119.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
115.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
113.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
105.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
103.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
102.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
100.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
94.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
87.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
87.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
85.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
83.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
79.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
77.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
74.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
73.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
70.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
70.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
69.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
69.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
68.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
67.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
65.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
65.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
65.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
62.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
62.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
57.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
56.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
54.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
52.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
52.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
51.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
48.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
47.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
46.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
45.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
45.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
43.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
40.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
40.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
40.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
39.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
38.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
37.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
36.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
34.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
34.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
33.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
30.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
30.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
29.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
28.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
28.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
28.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
27.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
27.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
27.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
25.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
25.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
24.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
24.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
23.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
23.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
22.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
22.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
22.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
22.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
21.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
21.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
21.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
20.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
20.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
19.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
19.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
19.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
18.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
18.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
18.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
18.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
18.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
17.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
17.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
17.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
16.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
16.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
16.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
16.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
16.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
15.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
15.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
15.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
15.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
14.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
13.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
13.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
13.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
13.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
12.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
11.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
11.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
10.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
10.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
10.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
10.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
10.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
9.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
9.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
9.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
9.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
8.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
8.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
8.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
7.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
7.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
6.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
6.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
6.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
6.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
6.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
5.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
5.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
4.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
4.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
4.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
4.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
4.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
4.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
4.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
3.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
2.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
1.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
107.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 107.8
Samples: 4
Max nTPM: 128.2
Min nTPM: 92.1
Sample A
Male
92.1
Sample B
Male
100.0
Sample C
Female
128.2
Sample D
Female
110.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.