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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS21 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
802.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4608.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1984.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1864.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1594.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1425.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1350.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1332.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1320.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1289.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1272.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1233.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1228.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1134.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1071.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1052.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1025.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1009.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
989.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
978.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
970.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
970.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
911.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
910.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
909.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
880.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
824.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
822.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
816.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
804.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
788.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
785.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
767.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
758.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
721.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
698.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
656.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
644.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
623.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
571.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
562.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
551.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
517.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
514.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
476.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
438.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
389.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
374.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
361.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
320.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
306.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
305.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
277.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
269.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
245.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
241.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
239.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
209.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
205.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
198.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
181.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
177.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
164.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
123.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS21 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1678.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6274.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5764.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5460.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4922.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4648.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4489.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4246.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
3930.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3857.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3735.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3734.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3539.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3508.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3478.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3472.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3302.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
3282.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3277.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
3226.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3189.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
3167.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
3116.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3074.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
3051.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
3038.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3001.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
2990.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
2984.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
2881.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
2837.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
2833.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
2811.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
2807.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2753.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
2734.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
2724.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2718.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
2685.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
2655.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2638.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2623.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
2618.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
2599.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
2595.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
2595.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2594.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2583.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
2562.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
2553.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2551.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
2541.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2511.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
2507.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
2497.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2497.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
2478.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
2457.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
2456.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
2453.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2385.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
2378.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
2376.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2367.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
2367.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2365.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2355.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2332.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
2332.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2328.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
2306.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
2297.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
2295.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2292.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
2267.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2259.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
2259.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
2251.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2244.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2232.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2229.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2228.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
2225.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
2197.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2187.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
2184.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
2176.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
2173.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
2169.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2165.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
2164.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
2163.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2155.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
2152.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
2148.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
2125.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
2111.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
2106.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
2099.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
2094.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2087.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
2074.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
2071.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
2066.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2065.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2065.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
2052.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
2052.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2046.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
2045.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
2033.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
2030.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
2024.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
2019.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
2016.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2003.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
2001.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1998.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
1995.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1991.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
1982.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
1975.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
1968.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
1966.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
1962.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1961.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
1956.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1954.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
1941.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1938.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
1937.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1937.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
1931.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1930.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
1928.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
1926.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
1922.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
1921.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1921.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
1919.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1914.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
1910.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
1906.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
1905.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
1903.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1903.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
1903.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
1902.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1898.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
1890.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1885.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
1877.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1877.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1876.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
1874.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
1868.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
1864.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1861.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1859.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1858.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1854.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
1846.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1845.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
1841.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
1841.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
1837.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1837.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
1836.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1832.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
1826.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1821.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1820.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
1812.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1810.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
1803.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1798.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
1796.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
1796.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
1794.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1794.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1783.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1779.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1778.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
1778.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
1777.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
1771.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
1771.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1762.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
1760.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1757.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1756.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
1754.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
1753.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
1752.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1745.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
1743.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
1741.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1740.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1739.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1739.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1737.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1732.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1730.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
1730.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
1730.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
1729.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1726.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
1725.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
1721.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
1719.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1717.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
1714.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
1707.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
1707.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1706.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
1699.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1690.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
1688.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
1687.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
1682.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
1682.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
1680.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1679.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
1674.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
1672.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1672.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
1671.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1670.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
1670.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
1667.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1659.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
1659.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1658.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
1652.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1644.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1641.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1627.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
1626.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
1621.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
1618.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
1617.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
1611.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
1610.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
1609.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1607.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1604.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1602.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1602.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
1598.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1588.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
1587.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1584.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1578.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1574.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1571.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1570.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1570.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
1569.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1566.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
1563.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
1562.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
1555.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1555.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
1554.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
1553.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1551.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
1549.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
1545.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1541.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1536.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
1536.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1533.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1530.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1529.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
1528.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1528.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1524.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
1523.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1520.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1519.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
1519.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
1516.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1515.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
1513.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1509.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
1508.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1507.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1506.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1504.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
1504.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
1501.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
1498.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1497.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1496.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
1493.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
1493.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
1489.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
1489.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1483.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
1481.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
1460.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
1459.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
1459.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
1453.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1451.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
1449.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
1444.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
1441.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
1438.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1435.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1434.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
1434.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
1433.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1424.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1423.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1417.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
1416.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
1411.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1406.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1405.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1400.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1400.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1398.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
1397.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
1397.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1397.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1394.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
1393.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1390.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
1390.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1388.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1387.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
1386.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
1383.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
1380.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1377.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
1375.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1375.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
1372.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
1371.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
1369.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1368.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1365.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
1363.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
1361.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1360.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1359.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
1356.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
1354.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1352.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
1351.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1349.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1349.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
1346.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1346.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
1345.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1342.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1341.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
1341.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1337.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
1331.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
1325.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
1321.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1321.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
1319.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
1314.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
1311.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1308.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
1306.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
1293.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1292.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
1288.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
1287.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
1287.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1279.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1277.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
1272.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
1270.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
1267.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
1265.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1264.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
1259.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
1258.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1248.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
1248.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1248.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
1247.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1243.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
1234.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
1233.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1227.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
1221.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
1219.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1215.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1213.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1210.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
1209.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1206.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
1206.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
1200.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
1196.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1193.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1190.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
1186.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
1186.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1186.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1181.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1180.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
1174.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
1174.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1168.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
1164.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
1161.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
1160.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1159.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
1156.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1155.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1154.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
1147.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
1143.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
1137.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1137.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
1129.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1127.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
1127.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1124.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
1123.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1116.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1115.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
1110.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1098.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
1086.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
1086.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
1080.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1080.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1078.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1073.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
1070.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
1068.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
1061.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
1059.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
1058.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
1055.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
1052.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1048.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1047.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
1038.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
1033.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
1028.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1024.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
1016.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
1002.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
998.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
992.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
991.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
990.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
985.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
984.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
984.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
984.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
983.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
980.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
976.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
972.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
972.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
970.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
965.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
964.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
958.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
958.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
953.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
946.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
945.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
939.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
937.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
935.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
934.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
924.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
915.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
908.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
903.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
897.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
887.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
885.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
870.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
869.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
866.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
864.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
863.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
862.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
853.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
843.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
829.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
829.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
789.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
787.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
780.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
771.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
763.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
761.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
761.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
744.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
740.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
733.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
730.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
710.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
683.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
653.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
643.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
637.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
629.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
628.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
627.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
624.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
565.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
553.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
551.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
523.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
497.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
484.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
233.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS21 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1525.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6563.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
3023.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
2972.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2927.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
2868.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2851.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2815.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2716.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2687.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2544.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
2528.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
2347.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2199.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
2172.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
2122.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
2102.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
2022.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1968.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
1936.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1921.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1865.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
1823.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
1726.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1722.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
1697.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1680.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
1638.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
1626.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1602.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
1601.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1587.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1578.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
1573.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1529.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1527.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
1525.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
1511.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1501.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1481.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
1481.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
1444.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
1433.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1415.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
1394.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
1393.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
1375.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
1360.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
1355.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
1346.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
1329.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1319.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1316.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1316.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1298.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1279.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
1268.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
1257.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1250.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1243.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
1230.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
1209.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1206.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1205.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
1187.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
1185.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1178.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1175.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1168.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
1140.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1126.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1112.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
1112.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
1107.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
1094.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1091.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
1089.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
1087.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1080.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
1071.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1071.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
1066.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
1062.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1047.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
1038.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
1013.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1001.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
973.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
961.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
960.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
917.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
917.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
888.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
876.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
870.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
868.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
822.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
777.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
586.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
566.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS21 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1305.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9502.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5565.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4754.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4542.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4078.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3490.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3477.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3379.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3179.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3162.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3158.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
3053.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2959.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
2893.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2795.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2751.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2747.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2719.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2631.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2553.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
2479.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
2478.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
2440.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2433.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
2372.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2357.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2353.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2348.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2324.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
2312.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2311.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2286.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
2263.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2249.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2220.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2206.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2144.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2111.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2070.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2055.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2035.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2025.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2014.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1985.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1983.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1947.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1933.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1923.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1919.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1895.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1885.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
1876.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1842.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1825.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1813.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1811.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1810.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1789.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
1773.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1760.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1757.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1742.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1737.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1720.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1698.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1686.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1662.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
1652.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1634.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1626.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1625.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1618.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1615.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
1614.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1596.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1589.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1588.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1587.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1581.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1578.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1574.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1565.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
1556.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1554.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
1523.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
1521.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1510.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
1501.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1496.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
1484.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1483.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1479.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1475.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
1471.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1469.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
1466.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1455.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1451.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1447.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1441.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1437.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1435.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1430.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1427.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1422.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1419.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1414.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1412.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1405.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
1398.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1385.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1382.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1380.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1364.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1355.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1346.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1340.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
1330.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1327.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
1303.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1296.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1293.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1281.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
1270.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1263.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1254.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1251.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
1248.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
1242.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
1238.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1237.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1237.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1230.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
1228.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1227.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
1221.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1219.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
1218.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1208.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1207.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1206.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1191.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1190.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
1190.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1180.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
1174.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1173.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
1153.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1150.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1140.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1138.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1125.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1124.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1122.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1118.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1115.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1112.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
1111.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1105.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1104.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1099.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
1089.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
1084.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
1080.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
1079.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1073.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
1069.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1059.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1058.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
1034.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1034.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1020.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
1020.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1017.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
1011.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1008.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1005.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1004.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1004.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
994.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
988.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
987.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
976.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
976.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
965.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
961.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
947.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
946.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
929.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
929.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
914.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
913.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
865.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
863.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
847.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
813.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
802.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
798.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
786.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
780.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
765.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
759.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
757.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
750.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
738.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
724.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
720.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
719.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
715.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
707.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
697.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
687.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
685.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
669.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
666.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
638.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
621.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
608.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
608.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
603.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
595.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
564.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
541.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
536.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
536.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
514.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
512.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
506.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
502.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
500.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
477.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
468.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
467.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
459.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
449.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
445.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
405.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
401.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
389.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
388.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
385.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
385.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
375.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
374.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
364.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
362.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
359.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
318.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
315.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
313.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
312.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
302.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
297.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
293.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
288.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
280.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
272.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
271.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
270.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
268.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
267.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
257.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
252.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
248.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
247.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
236.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
233.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
219.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
217.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
207.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
203.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
198.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
175.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
173.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
165.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
152.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
137.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
125.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
85.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
82.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
75.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.9
CPT0092190003
Normal
0.7
CPT0012180003
Tumor
0.7
CPT0065430003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0023350003
Tumor
0.5
CPT0092160003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0084560003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0014470001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0077110003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0001190001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0001540009
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0077320001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0010120001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0078670001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0007470001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0066470004
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0001500009
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0015730003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0025170003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0077310003
Tumor
-0.6
CPT0078510003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
