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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS21 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1447.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10072.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
8654.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6010.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5105.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4927.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4784.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4770.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4674.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4087.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4070.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3924.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3874.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3552.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3532.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3522.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3490.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3484.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3465.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3400.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3318.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3258.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3258.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3227.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3155.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3137.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3090.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3030.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3008.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2968.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2887.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2875.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2832.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2750.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2731.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
2728.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2717.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2693.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2666.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2622.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2582.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2515.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
2502.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2502.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2499.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2498.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2463.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2448.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2370.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2356.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2306.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2255.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2250.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2242.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2173.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2153.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2140.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2137.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2127.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2124.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2113.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2111.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2105.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2092.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2072.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2056.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2029.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1974.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1958.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1950.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1925.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1923.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1922.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1913.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1906.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1905.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1879.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1867.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1851.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1841.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1839.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1828.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1807.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1806.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1791.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1780.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1744.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1744.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1741.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1740.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1730.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1728.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1715.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1710.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1687.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1675.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1674.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1653.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1646.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1625.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1617.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1611.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1587.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1576.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1563.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1557.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1549.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1544.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1531.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1511.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1504.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1496.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1468.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1468.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1464.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1460.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1458.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1454.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1451.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1451.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1447.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1436.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1435.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1433.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1410.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1404.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1383.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1379.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1378.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1372.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1369.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1367.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1359.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1357.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1355.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1343.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1340.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1337.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1325.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1322.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1321.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1316.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1306.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1302.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1300.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1298.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1293.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1287.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1276.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1267.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1265.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1251.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1251.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1245.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1241.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1237.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1235.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1226.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1214.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1213.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1211.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1208.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1189.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1176.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1169.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1167.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1162.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1161.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1158.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1156.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1156.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1151.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1146.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1140.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1139.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1138.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1131.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1119.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1118.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1118.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1110.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1100.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1097.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1096.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1094.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1091.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1085.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1084.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1083.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1083.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1082.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1081.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1075.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1071.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1063.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1062.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1062.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1062.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1060.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1059.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1054.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1049.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1047.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1045.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1044.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1036.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1033.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1031.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1015.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1013.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1010.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1007.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1007.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1007.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1006.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
996.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
996.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
993.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
981.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
980.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
978.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
978.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
975.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
972.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
972.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
972.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
970.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
968.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
967.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
961.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
952.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
945.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
940.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
939.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
933.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
932.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
927.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
927.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
920.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
919.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
918.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
917.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
915.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
912.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
912.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
911.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
906.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
901.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
900.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
900.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
900.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
899.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
896.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
894.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
881.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
880.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
880.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
876.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
875.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
872.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
869.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
868.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
865.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
865.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
851.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
849.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
846.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
845.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
843.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
841.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
839.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
837.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
837.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
836.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
831.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
818.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
814.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
812.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
809.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
805.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
801.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
800.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
798.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
796.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
792.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
785.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
780.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
779.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
778.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
771.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
768.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
756.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
753.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
752.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
748.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
744.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
742.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
742.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
740.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
734.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
732.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
729.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
728.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
725.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
724.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
723.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
722.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
718.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
716.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
698.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
696.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
689.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
683.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
681.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
680.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
676.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
661.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
660.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
658.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
658.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
651.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
650.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
631.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
631.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
631.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
626.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
624.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
622.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
611.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
606.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
599.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
598.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
595.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
584.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
583.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
582.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
576.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
575.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
571.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
558.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
550.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
550.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
545.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
543.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
542.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
533.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
524.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
514.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
512.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
502.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
493.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
490.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
489.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
480.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
476.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
469.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
461.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
441.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
435.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
426.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
423.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
423.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS21 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
585.8
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
4346.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1986.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
1985.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
1973.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
1971.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
1800.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
1779.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
1604.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
1566.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
1556.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
1533.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
1507.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
1479.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1425.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
1402.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
1337.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1250.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
1247.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
1207.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
1188.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1186.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1161.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
1075.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
1053.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
1052.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
1018.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
1004.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
983.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
980.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
968.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
942.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
933.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
903.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
889.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
887.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
887.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
865.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
860.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
837.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
836.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
812.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
809.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
807.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
806.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
796.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
793.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
764.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
761.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
760.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
756.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
743.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
735.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
721.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
715.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
710.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
690.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
688.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
684.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
682.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
664.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
664.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
663.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
658.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
653.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
651.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
649.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
637.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
622.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
618.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
617.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
616.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
616.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
610.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
605.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
592.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
590.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
590.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
588.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
586.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
583.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
582.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
579.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
577.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
576.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
554.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
552.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
548.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
543.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
540.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
539.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
538.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
537.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
530.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
528.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
521.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
519.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
509.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
506.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
505.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
505.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
502.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
500.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
491.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
488.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
487.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
479.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
477.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
477.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
473.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
471.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
471.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
469.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
466.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
466.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
464.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
461.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
459.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
455.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
454.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
453.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
452.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
447.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
445.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
441.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
441.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
440.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
437.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
435.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
422.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
420.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
413.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
406.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
406.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
405.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
401.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
399.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
397.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
397.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
396.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
385.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
383.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
380.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
380.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
379.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
374.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
371.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
369.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
368.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
367.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
365.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
363.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
360.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
359.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
357.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
356.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
356.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
353.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
353.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
351.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
350.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
343.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
342.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
340.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
338.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
337.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
336.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
334.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
334.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
333.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
331.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
331.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
331.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
326.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
323.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
321.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
320.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
319.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
312.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
309.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
307.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
302.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
298.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
295.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
293.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
292.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
292.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
291.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
290.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
289.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
286.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
281.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
280.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
276.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
271.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
265.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
262.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
258.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
258.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
255.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
252.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
250.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
249.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
246.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
243.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
242.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
241.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
239.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
237.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
235.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
235.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
235.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
230.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
229.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
229.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
221.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
219.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
215.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
213.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
207.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
205.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
187.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
187.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
185.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
181.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
159.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
156.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
154.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
152.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
137.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
137.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
121.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
327
Tumor
0.5
537
Tumor
0.5
557
Tumor
0.5
981
Tumor
0.5
497
Tumor
0.5
965
Tumor
0.4
527
Tumor
0.4
525
Tumor
0.4
516
Normal
0.4
523
Tumor
0.4
937
Tumor
0.4
955
Tumor
0.3
473
Tumor
0.3
285
Tumor
0.3
698
Normal
0.3
353
Tumor
0.3
957
Tumor
0.3
524
Normal
0.3
545
Tumor
0.3
515
Tumor
0.3
518
Normal
0.3
964
Normal
0.3
494
Normal
0.3
982
Normal
0.3
492
Normal
0.3
526
Normal
0.3
553
Tumor
0.3
484
Normal
0.3
728
Normal
0.2
918
Normal
0.2
968
Normal
0.2
951
Tumor
0.2
944
Normal
0.2
958
Normal
0.2
131
Tumor
0.2
1025
Tumor
0.2
1043
Tumor
0.2
514
Normal
0.2
685
Tumor
0.2
358
Normal
0.2
533
Tumor
0.2
983
Tumor
0.2
925
Tumor
0.2
535
Tumor
0.2
488
Normal
0.2
1021
Tumor
0.2
938
Normal
0.2
727
Tumor
0.2
534
Normal
0.2
546
Normal
0.2
966
Normal
0.2
745
Tumor
0.2
481
Tumor
0.2
1026
Normal
0.2
393
Tumor
0.2
412
Normal
0.2
1027
Tumor
0.2
926
Normal
0.2
976
Normal
0.2
191
Tumor
0.2
1042
Normal
0.2
697
Tumor
0.2
696
Normal
0.2
851
Tumor
0.1
1014
Normal
0.1
448
Normal
0.1
355
Tumor
0.1
777
Tumor
0.1
436
Normal
0.1
472
Normal
0.1
536
Normal
0.1
865
Tumor
0.1
483
Tumor
0.1
352
Normal
0.1
967
Tumor
0.1
113
Tumor
0.1
785
Tumor
0.1
392
Normal
0.1
1032
Normal
0.1
917
Tumor
0.1
212
Normal
0.1
817
Tumor
0.1
912
Normal
0.1
956
Normal
0.1
135
Tumor
0.1
387
Tumor
0.1
513
Tumor
0.1
1016
Normal
0.1
954
Normal
0.1
478
Normal
0.1
943
Tumor
0.1
554
Normal
0.1
1028
Normal
0.1
778
Normal
0.1
471
Tumor
0.1
314
Normal
0.1
218
Normal
0.1
332
Normal
0.1
923
Tumor
0.1
517
Tumor
0.1
493
Tumor
0.1
924
Normal
0.1
953
Tumor
0.1
952
Normal
0.1
385
Tumor
0.1
223
Tumor
0.1
528
Normal
0.1
286
Normal
0.1
474
Normal
0.1
538
Normal
0.1
756
Normal
0.1
686
Normal
0.1
716
Normal
0.1
344
Normal
0.1
257
Tumor
0.1
978
Normal
0.1
196
Normal
0.1
567
Tumor
0.1
873
Tumor
0.1
394
Normal
0.1
464
Normal
0.0
312
Normal
0.0
1022
Normal
0.0
922
Normal
0.0
221
Tumor
0.0
963
Tumor
0.0
714
Normal
0.0
467
Tumor
0.0
395
Tumor
0.0
342
Normal
0.0
142
Normal
0.0
498
Normal
0.0
426
Normal
0.0
823
Tumor
0.0
1044
Normal
0.0
363
Tumor
0.0
913
Tumor
0.0
432
Normal
0.0
738
Normal
0.0
411
Tumor
0.0
573
Tumor
0.0
477
Tumor
0.0
882
Normal
0.0
482
Normal
0.0
975
Tumor
0.0
354
Normal
0.0
815
Tumor
0.0
331
Tumor
0.0
214
Normal
0.0
1015
Tumor
0.0
661
Tumor
0.0
227
Tumor
0.0
386
Normal
0.0
721
Tumor
0.0
462
Normal
0.0
713
Tumor
0.0
388
Normal
0.0
416
Normal
0.0
341
Tumor
0.0
715
Tumor
0.0
224
Normal
0.0
916
Normal
0.0
866
Normal
0.0
137
Tumor
0.0
1031
Tumor
0.0
298
Normal
0.0
192
Normal
0.0
195
Tumor
0.0
984
Normal
0.0
755
Tumor
0.0
222
Normal
0.0
376
Normal
0.0
466
Normal
0.0
737
Tumor
0.0
446
Normal
0.0
861
Tumor
0.0
356
Normal
0.0
915
Tumor
0.0
443
Tumor
0.0
864
Normal
0.0
413
Tumor
0.0
278
Normal
0.0
421
Tumor
0.0
447
Tumor
0.0
883
Tumor
0.0
211
Tumor
0.0
364
Normal
0.0
396
Normal
0.0
568
Normal
0.0
868
Normal
0.0
878
Normal
0.0
786
Normal
-0.1
415
Tumor
-0.1
857
Tumor
-0.1
311
Tumor
-0.1
213
Tumor
-0.1
351
Tumor
-0.1
722
Normal
-0.1
558
Normal
-0.1
456
Normal
-0.1
422
Normal
-0.1
433
Tumor
-0.1
444
Normal
-0.1
434
Normal
-0.1
746
Normal
-0.1
487
Tumor
-0.1
914
Normal
-0.1
723
Tumor
-0.1
862
Normal
-0.1
228
Normal
-0.1
128
Normal
-0.1
867
Tumor
-0.1
414
Normal
-0.1
816
Normal
-0.1
617
Tumor
-0.1
111
Normal
-0.1
367
Tumor
-0.1
431
Tumor
-0.1
455
Tumor
-0.1
186
Normal
-0.1
884
Normal
-0.1
148
Normal
-0.1
343
Tumor
-0.1
1041
Tumor
-0.1
742
Normal
-0.1
824
Normal
-0.1
232
Normal
-0.1
468
Normal
-0.1
136
Normal
-0.1
695
Tumor
-0.1
217
Tumor
-0.1
572
Normal
-0.1
921
Tumor
-0.1
636
Normal
-0.1
672
Normal
-0.1
1046
Normal
-0.1
874
Normal
-0.1
141
Tumor
-0.1
126
Normal
-0.1
1045
Tumor
-0.1
852
Normal
-0.1
461
Tumor
-0.1
424
Normal
-0.1
357
Tumor
-0.1
435
Tumor
-0.1
283
Tumor
-0.1
328
Normal
-0.1
114
Normal
-0.1
172
Normal
-0.1
445
Tumor
-0.1
616
Normal
-0.1
267
Tumor
-0.2
391
Tumor
-0.2
162
Normal
-0.2
858
Normal
-0.2
132
Normal
-0.2
187
Tumor
-0.2
814
Normal
-0.2
145
Tumor
-0.2
465
Tumor
-0.2
146
Normal
-0.2
564
Normal
-0.2
188
Normal
-0.2
818
Normal
-0.2
138
Normal
-0.2
451
Tumor
-0.2
452
Normal
-0.2
362
Normal
-0.2
262
Normal
-0.2
881
Tumor
-0.2
425
Tumor
-0.2
258
Normal
-0.2
863
Tumor
-0.2
1013
Tumor
-0.2
427
Tumor
-0.2
463
Tumor
-0.2
813
Tumor
-0.2
428
Normal
-0.2
261
Tumor
-0.2
615
Tumor
-0.2
384
Normal
-0.2
744
Normal
-0.2
662
Normal
-0.2
724
Normal
-0.2
423
Tumor
-0.2
147
Tumor
-0.2
977
Tumor
-0.2
618
Normal
-0.2
284
Normal
-0.2
272
Normal
-0.2
648
Normal
-0.2
664
Normal
-0.2
628
Normal
-0.3
297
Tumor
-0.3
491
Tumor
-0.3
563
Tumor
-0.3
365
Tumor
-0.3
268
Normal
-0.3
574
Normal
-0.3
185
Tumor
-0.3
231
Tumor
-0.3
375
Tumor
-0.3
666
Normal
-0.3
911
Tumor
-0.3
366
Normal
-0.3
277
Tumor
-0.3
313
Tumor
-0.3
743
Tumor
-0.3
383
Tumor
-0.4
642
Normal
-0.4
647
Tumor
-0.4
124
Normal
-0.4
571
Tumor
-0.4
361
Tumor
-0.4
171
Tumor
-0.4
663
Tumor
-0.4
665
Tumor
-0.4
271
Tumor
-0.4
127
Tumor
-0.4
877
Tumor
-0.4
112
Tumor
-0.5
627
Tumor
-0.5
123
Tumor
-0.5
741
Tumor
-0.5
671
Tumor
-0.5
125
Tumor
-0.5
641
Tumor
-0.5
161
Tumor
-0.5
635
Tumor
-0.6
368
Normal
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.