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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
103.4
nTPM
HPA Brain:
306.6
nTPM
GTEx:
103.4
nTPM
FANTOM5:
23.5
Scaled Tags Per Million
Pig:
70.9
nTPM
Mouse:
210.6
nTPM
Allen mouse:
18.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
306.6
Sample id
Sample description
nTPM
Amygdala nTPM: 234.1
2814
Male, age 76, right hemisphere
322.2
2517
Female, age 94, left hemisphere
228.0
2514
Male, age 75, right hemisphere
213.7
2695
Female, age 67, right hemisphere
211.8
1987
Female, age 91, left hemisphere
195.0
Basal amygdala nTPM: 276.4
2827
Female, age 67, right hemisphere
380.4
2685
Female, age 94, left hemisphere
305.4
1955
Male, age 76, both hemispheres
276.9
2243
Female, age 91, right hemisphere
252.4
2110
Male, age 80, left hemisphere
243.4
2609
Male, age 75, right hemisphere
199.8
Central amygdala nTPM: 264.1
1905
Male, age 76, both hemispheres
287.9
2826
Female, age 94, left hemisphere
285.9
2701
Female, age 91, right hemisphere
273.0
2239
Male, age 80, left hemisphere
266.3
2515
Male, age 75, right hemisphere
207.5
Corticomedial amygdala nTPM: 230.4
2535
Female, age 67, right hemisphere
329.5
2429
Female, age 94, left hemisphere
253.7
2240
Male, age 76, both hemispheres
236.1
2829
Male, age 80, left hemisphere
203.5
2242
Female, age 91, right hemisphere
183.4
2428
Male, age 75, right hemisphere
176.2
Lateral amygdala nTPM: 306.6
2830
Female, age 67, right hemisphere
386.0
2534
Female, age 94, left hemisphere
330.0
2255
Female, age 91, right hemisphere
302.1
2256
Male, age 80, left hemisphere
294.9
1883
Male, age 76, both hemispheres
289.7
2516
Male, age 75, right hemisphere
236.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
103.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 103.4
Samples: 152
Max nTPM: 211.4
Min nTPM: 3.2
Std nTPM: 33.3
Median nTPM: 104.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
211.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
183.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
182.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
175.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
175.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
171.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
165.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
164.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
164.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
161.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
157.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
155.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
152.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
149.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
147.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
141.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
140.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
139.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
138.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
137.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
136.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
135.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
133.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
133.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
132.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
129.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
129.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
128.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
126.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
126.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
125.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
125.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
125.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
124.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
124.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
122.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
122.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
122.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
121.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
121.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
120.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
120.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
119.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
119.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
119.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
119.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
118.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
118.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
117.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
116.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
115.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
115.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
114.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
114.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
113.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
113.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
112.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
112.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
112.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
111.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
110.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
110.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
109.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
109.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
108.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
108.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
108.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
107.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
107.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
106.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
106.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
105.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
105.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
105.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
104.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
104.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
104.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
103.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
103.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
103.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
103.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
102.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
102.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
100.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
99.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
99.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
99.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
98.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
98.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
97.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
97.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
96.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
96.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
96.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
96.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
96.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
95.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
95.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
94.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
94.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
94.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
92.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
91.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
89.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
89.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
86.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
85.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
85.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
85.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
84.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
83.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
81.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
81.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
80.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
79.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
76.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
76.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
75.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
75.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
75.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
73.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
70.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
70.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
70.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
70.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
70.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
69.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
69.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
67.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
66.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
66.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
66.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
66.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
66.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
66.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
65.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
64.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
61.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
59.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
58.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
57.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
55.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
55.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
51.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
48.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
47.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
45.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
44.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
42.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
40.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
32.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
210.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 210.6
Samples: 4
Max nTPM: 229.0
Min nTPM: 199.7
Sample A
Male
207.3
Sample B
Male
206.3
Sample C
Female
229.0
Sample D
Female
199.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.