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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
606.9
nTPM
HPA Brain:
521.4
nTPM
GTEx:
606.9
nTPM
FANTOM5:
341.0
Scaled Tags Per Million
Mouse:
234.3
nTPM
Allen mouse:
9.5
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA020725
Glial cells
Not detected
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
521.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 439.2
1855
Male, age 76, left hemisphere
654.0
1898
Male, age 80, left hemisphere
573.4
2621
Female, age 67, right hemisphere
474.1
2148
Female, age 91, left hemisphere
343.4
1911
Female, age 85, right hemisphere
317.7
2529
Female, age 94, left hemisphere
272.5
Dentate gyrus nTPM: 408.8
1927
Female, age 91, both hemispheres
595.0
2530
Female, age 94, left hemisphere
571.7
2010
Male, age 76, both hemispheres
568.7
2246
Female, age 85, both hemispheres
282.9
2531
Female, age 67, both hemispheres
235.1
2528
Male, age 74, both hemispheres
199.6
Entorhinal gyrus nTPM: 181.1
2613
Female, age 94, left hemisphere
239.3
1938
Female, age 85, left hemisphere
185.5
2764
Male, age 80, right hemisphere
184.3
1787
Male, age 76, left hemisphere
178.2
2686
Male, age 75, right hemisphere
169.5
2117
Female, age 91, right hemisphere
130.1
Hippocampus, CA1 nTPM: 521.4
2749
Male, age 80, left hemisphere
1146.7
2045
Male, age 76, both hemispheres
498.4
1873
Female, age 85, both hemispheres
488.8
2527
Male, age 74, both hemispheres
282.4
2082
Female, age 91, right hemisphere
190.9
Hippocampus, CA2 nTPM: 404.4
1963
Male, age 80, left hemisphere
736.2
1892
Male, age 76, both hemispheres
640.0
2437
Female, age 94, left hemisphere
382.0
2249
Male, age 74, both hemispheres
245.2
1940
Female, age 85, left hemisphere
222.2
2113
Female, age 91, right hemisphere
200.7
Hippocampus, CA3 nTPM: 411.5
2137
Male, age 80, left hemisphere
786.2
1867
Male, age 76, both hemispheres
492.4
2861
Female, age 67, both hemispheres
454.5
2620
Female, age 94, left hemisphere
306.9
2436
Male, age 74, both hemispheres
225.3
1891
Female, age 85, both hemispheres
203.8
Parahippocampal cortex nTPM: 207.2
2245
Female, age 91, both hemispheres
379.4
2018
Male, age 76, both hemispheres
296.5
2250
Female, age 67, right hemisphere
205.8
1850
Male, age 80, both hemispheres
194.1
1933
Female, age 85, both hemispheres
190.2
2622
Female, age 67, right hemisphere
187.8
2693
Female, age 94, both hemispheres
165.1
2532
Female, age 72, left hemisphere
161.2
1990
Female, age 91, right hemisphere
147.0
2692
Male, age 74, both hemispheres
145.3
Perirhinal gyrus nTPM: 201.3
1847
Female, age 91, left hemisphere
236.9
2521
Female, age 94, right hemisphere
227.0
1794
Male, age 80, right hemisphere
224.8
1841
Female, age 85, right hemisphere
177.0
2848
Male, age 76, right hemisphere
140.8
Subiculum nTPM: 268.3
1901
Male, age 80, both hemispheres
461.0
2042
Male, age 76, both hemispheres
425.4
2438
Female, age 94, left hemisphere
233.3
2729
Female, age 91, right hemisphere
182.2
2619
Male, age 74, both hemispheres
160.4
1977
Female, age 85, both hemispheres
147.4
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
606.9
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 606.9
Samples: 197
Max nTPM: 1848.1
Min nTPM: 118.6
Std nTPM: 334.6
Median nTPM: 576.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1848.1
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1581.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1535.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
1404.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1384.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1359.3
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
1342.6
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
1326.2
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1296.3
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
1289.6
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1253.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
1229.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1219.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
1195.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
1174.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
1168.2
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
1165.8
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
1158.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
1074.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1072.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
1069.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
1035.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
1031.9
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1017.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1000.7
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
991.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
970.6
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
944.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
930.6
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
924.8
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
918.6
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
917.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
910.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
909.3
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
905.9
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
904.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
893.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
883.9
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
882.7
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
871.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
850.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
844.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
836.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
831.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
828.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
826.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
820.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
819.0
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
803.4
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
795.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
792.4
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
788.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
788.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
781.1
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
775.5
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
771.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
765.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
754.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
747.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
746.8
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
744.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
744.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
743.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
726.7
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
724.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
719.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
715.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
715.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
707.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
704.7
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
699.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
697.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
696.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
686.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
673.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
671.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
668.9
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
664.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
664.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
662.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
652.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
647.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
640.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
638.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
637.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
630.4
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
615.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
613.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
610.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
607.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
607.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
599.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
595.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
590.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
590.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
590.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
585.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
582.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
576.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
575.8
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
570.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
534.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
528.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
508.2
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
503.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
502.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
496.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
494.0
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
491.1
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
484.6
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
464.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
462.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
454.2
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
453.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
451.4
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
444.4
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
444.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
443.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
441.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
437.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
435.1
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
434.4
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
420.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
418.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
417.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
416.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
414.4
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
410.1
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
401.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
389.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
386.5
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
386.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
383.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
380.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
380.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
378.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
367.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
366.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
365.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
359.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
359.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
355.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
352.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
352.2
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
352.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
345.1
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
344.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
344.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
341.6
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
340.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
337.5
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
336.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
333.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
325.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
314.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
313.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
307.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
305.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
305.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
301.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
297.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
296.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
294.2
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
293.1
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
288.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
287.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
285.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
279.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
274.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
272.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
268.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
261.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
258.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
252.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
250.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
240.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
221.2
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
220.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
219.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
211.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
206.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
205.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
200.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
189.1
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
188.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
187.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
182.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
177.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
176.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
176.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
172.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
164.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
161.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
157.6
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
127.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
119.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
118.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
234.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 234.3
Samples: 4
Max nTPM: 308.6
Min nTPM: 189.3
Sample A
Male
242.0
Sample B
Male
308.6
Sample C
Female
189.3
Sample D
Female
197.4
Hippocampal formation nTPM: 140.2
Samples: 4
Max nTPM: 178.3
Min nTPM: 114.3
Sample A
Male
149.4
Sample B
Male
114.3
Sample C
Female
118.6
Sample D
Female
178.3
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.