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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:124.3 nTPM
HPA Brain:99.0 nTPM
GTEx:124.3 nTPM
Mouse:45.7 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 84.1
2226 Male, age 75, left hemisphere 92.9
1961 Female, age 42, unknown 75.2
Dorsomedial nucleus
nTPM: 86.8
1989 Male, age 62, unknown 127.2
2041 Female, age 72, unknown 71.2
2017 Female, age 42, unknown 61.9
Lateral hypothalamic area
nTPM: 95.9
2228 Male, age 66, unknown 106.9
1791 Male, age 80, right hemisphere 101.5
2271 Male, age 75, both hemispheres 92.7
2412 Male, age 62, unknown 82.5
Mammillary body
nTPM: 97.8
2413 Male, age 66, unknown 136.4
1923 Female, age 72, unknown 107.2
1948 Female, age 72, unknown 90.0
1834 Female, age 42, unknown 81.2
1945 Male, age 80, right hemisphere 74.3
Paraventricular nucleus
nTPM: 99.0
2700 Male, age 62, unknown 99.0
Preoptic area
nTPM: 73.2
1861 Female, age 42, unknown 77.3
1907 Male, age 80, right hemisphere 73.9
2414 Female, age 72, unknown 68.4
Supraoptic nucleus
nTPM: 84.3
2835 Female, age 72, unknown 102.5
1894 Female, age 72, unknown 80.0
2043 Male, age 62, unknown 70.3
Ventromedial nucleus
nTPM: 91.5
1982 Female, age 72, unknown 102.6
1822 Female, age 42, unknown 80.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 124.3
Samples: 257

Max nTPM: 373.6
Min nTPM: 31.5
Std nTPM: 47.9
Median nTPM: 111.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 373.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 327.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 309.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 293.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 271.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 266.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 258.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 237.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 235.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 229.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 229.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 228.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 224.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 223.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 221.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 218.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 216.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 207.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 205.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 202.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 202.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 199.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 199.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 193.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 190.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 188.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 186.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 185.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 184.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 177.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 173.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 171.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 171.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 169.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 167.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 166.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 166.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 161.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 161.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 158.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 157.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 155.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 154.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 153.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 153.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 151.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 151.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 149.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 149.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 147.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 146.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 145.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 145.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 143.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 143.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 142.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 142.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 142.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 141.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 141.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 141.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 140.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 140.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 139.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 138.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 138.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 136.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 135.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 135.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 134.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 134.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 134.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 134.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 133.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 133.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 133.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 132.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 132.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 131.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 131.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 130.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 130.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 130.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 129.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 128.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 128.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 128.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 127.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 126.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 126.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 125.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 125.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 125.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 125.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 124.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 123.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 122.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 122.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 122.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 122.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 122.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 121.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 121.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 120.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 120.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 120.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 119.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 119.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 119.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 119.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 118.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 117.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 117.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 116.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 116.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 116.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 116.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 115.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 114.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 114.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 114.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 113.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 112.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 112.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 112.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 111.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 111.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 111.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 111.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 110.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 110.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 110.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 109.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 109.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 109.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 109.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 109.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 108.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 108.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 108.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 107.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 107.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 107.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 107.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 107.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 106.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 106.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 106.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 106.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 106.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 106.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 106.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 105.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 105.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 105.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 105.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 105.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 104.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 104.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 103.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 103.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 103.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 103.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 102.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 102.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 102.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 102.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 102.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 102.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 101.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 101.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 100.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 100.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 100.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 100.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 99.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 99.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 99.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 98.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 98.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 97.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 97.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 97.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 97.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 96.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 96.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 96.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 95.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 95.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 95.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 95.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 95.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 95.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 95.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 94.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 94.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 94.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 94.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 92.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 92.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 92.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 92.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 92.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 92.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 92.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 91.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 91.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 90.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 89.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 89.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 88.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 88.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 88.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 88.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 88.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 87.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 86.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 86.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 86.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 86.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 85.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 85.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 84.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 84.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 84.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 83.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 82.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 82.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 82.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 82.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 82.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 82.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 82.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 82.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 81.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 80.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 79.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 79.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 78.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 78.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 78.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 78.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 76.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 75.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 74.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 73.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 71.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 71.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 70.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 69.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 69.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 62.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 62.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 50.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 42.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 31.5
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 45.7
Samples: 4

Max nTPM: 56.3
Min nTPM: 34.4
Sample A Male 52.7
Sample B Male 56.3
Sample C Female 34.4
Sample D Female 39.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.0
68631948 Antisense, RP_050125_01_D08, Mouse strain C57BL/6J (56 days, male) 5.4
71015816 Antisense, RP_050725_02_H12, Mouse strain C57BL/6J (56 days, male) 0.6

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