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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
412.8
nTPM
HPA Brain:
225.8
nTPM
GTEx:
412.8
nTPM
FANTOM5:
159.3
Scaled Tags Per Million
Mouse:
221.9
nTPM
Allen mouse:
7.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
225.8
Sample id
Sample description
nTPM
Amygdala nTPM: 150.9
2517
Female, age 94, left hemisphere
186.0
2814
Male, age 76, right hemisphere
147.6
2514
Male, age 75, right hemisphere
146.4
1987
Female, age 91, left hemisphere
143.3
2695
Female, age 67, right hemisphere
131.3
Basal amygdala nTPM: 225.8
2827
Female, age 67, right hemisphere
266.9
2243
Female, age 91, right hemisphere
259.8
2609
Male, age 75, right hemisphere
239.1
2685
Female, age 94, left hemisphere
228.2
2110
Male, age 80, left hemisphere
210.9
1955
Male, age 76, both hemispheres
149.9
Central amygdala nTPM: 179.6
2826
Female, age 94, left hemisphere
307.4
2239
Male, age 80, left hemisphere
193.9
2515
Male, age 75, right hemisphere
143.8
1905
Male, age 76, both hemispheres
130.1
2701
Female, age 91, right hemisphere
123.0
Corticomedial amygdala nTPM: 192.8
2829
Male, age 80, left hemisphere
272.9
2242
Female, age 91, right hemisphere
229.4
2428
Male, age 75, right hemisphere
175.3
2429
Female, age 94, left hemisphere
170.4
2535
Female, age 67, right hemisphere
170.4
2240
Male, age 76, both hemispheres
138.4
Lateral amygdala nTPM: 198.4
2830
Female, age 67, right hemisphere
279.8
2534
Female, age 94, left hemisphere
247.7
2516
Male, age 75, right hemisphere
210.8
2256
Male, age 80, left hemisphere
160.0
1883
Male, age 76, both hemispheres
148.9
2255
Female, age 91, right hemisphere
143.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
412.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 412.8
Samples: 152
Max nTPM: 1158.0
Min nTPM: 75.3
Std nTPM: 191.0
Median nTPM: 391.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1158.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1130.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1106.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1048.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
834.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
832.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
813.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
800.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
742.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
708.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
695.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
694.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
681.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
681.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
670.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
624.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
609.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
594.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
591.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
583.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
572.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
568.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
567.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
567.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
565.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
555.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
554.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
549.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
549.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
544.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
537.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
511.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
508.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
507.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
506.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
500.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
489.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
487.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
486.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
483.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
477.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
472.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
471.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
471.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
468.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
466.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
460.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
459.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
459.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
459.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
448.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
445.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
441.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
437.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
437.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
435.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
432.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
428.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
424.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
423.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
423.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
421.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
420.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
420.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
419.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
416.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
414.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
414.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
407.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
403.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
402.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
402.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
398.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
395.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
394.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
393.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
389.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
388.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
384.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
381.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
372.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
369.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
369.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
368.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
364.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
359.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
358.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
357.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
354.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
354.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
350.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
346.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
345.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
344.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
337.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
336.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
334.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
332.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
327.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
326.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
323.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
322.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
317.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
316.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
315.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
315.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
315.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
309.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
305.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
304.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
300.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
299.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
295.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
291.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
290.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
288.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
283.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
279.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
266.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
261.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
258.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
253.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
244.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
243.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
237.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
236.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
235.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
234.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
233.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
232.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
220.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
219.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
219.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
218.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
218.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
217.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
216.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
211.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
210.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
209.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
195.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
180.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
178.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
176.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
174.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
172.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
163.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
143.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
134.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
134.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
113.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
75.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
221.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 221.9
Samples: 4
Max nTPM: 324.0
Min nTPM: 184.5
Sample A
Male
186.9
Sample B
Male
192.1
Sample C
Female
324.0
Sample D
Female
184.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.