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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
218.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1255.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1218.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1197.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1166.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1033.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
660.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
574.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
526.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
459.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
434.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
416.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
413.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
411.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
399.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
395.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
392.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
357.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
323.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
267.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
223.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
181.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
166.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
124.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
123.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
115.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
94.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
93.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
87.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
83.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
69.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
52.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
52.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
49.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
42.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
39.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
36.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
35.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
33.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
30.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
26.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
480.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
1888.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1809.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
1756.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1714.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1653.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
1648.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1636.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
1534.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1510.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1458.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
1448.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1433.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1320.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
1304.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
1303.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1269.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1246.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1240.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
1227.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
1206.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
1191.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1190.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
1175.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1172.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
1141.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1135.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1126.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1095.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
1091.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
1087.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
1075.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1063.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
1061.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1054.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
1051.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
1045.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1037.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1037.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
1033.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1029.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1028.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1016.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1010.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
998.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
997.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
994.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
989.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
986.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
985.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
984.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
979.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
971.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
970.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
960.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
956.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
951.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
949.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
948.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
934.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
930.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
930.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
928.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
919.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
915.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
910.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
907.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
900.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
890.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
884.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
878.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
874.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
873.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
869.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
866.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
865.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
847.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
840.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
839.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
838.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
837.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
837.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
836.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
835.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
822.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
817.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
816.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
813.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
811.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
809.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
801.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
796.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
781.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
781.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
776.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
775.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
774.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
771.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
770.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
769.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
762.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
756.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
756.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
755.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
754.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
749.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
744.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
740.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
739.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
737.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
733.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
731.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
730.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
728.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
726.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
721.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
721.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
712.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
702.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
697.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
685.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
684.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
684.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
682.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
681.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
680.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
677.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
664.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
663.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
661.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
660.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
659.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
649.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
648.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
646.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
643.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
641.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
640.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
635.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
633.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
632.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
624.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
623.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
622.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
616.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
614.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
614.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
610.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
608.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
606.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
604.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
594.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
593.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
581.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
579.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
578.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
576.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
574.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
572.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
571.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
571.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
560.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
558.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
554.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
553.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
553.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
552.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
548.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
541.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
539.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
538.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
529.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
529.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
526.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
523.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
516.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
511.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
511.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
507.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
507.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
507.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
503.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
500.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
497.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
495.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
495.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
493.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
493.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
493.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
493.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
488.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
487.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
487.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
486.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
484.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
482.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
482.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
481.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
480.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
477.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
477.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
475.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
473.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
470.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
470.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
467.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
464.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
463.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
462.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
462.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
462.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
461.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
459.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
459.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
458.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
457.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
456.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
454.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
453.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
453.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
452.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
451.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
451.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
450.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
449.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
449.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
448.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
447.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
445.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
441.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
438.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
438.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
437.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
435.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
435.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
434.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
434.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
433.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
433.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
433.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
431.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
430.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
429.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
428.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
427.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
427.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
426.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
426.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
420.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
416.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
416.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
411.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
410.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
410.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
410.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
409.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
409.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
406.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
405.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
404.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
403.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
401.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
401.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
401.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
399.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
398.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
398.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
397.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
397.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
397.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
396.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
395.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
394.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
393.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
388.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
388.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
384.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
384.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
384.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
382.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
380.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
375.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
375.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
373.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
372.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
371.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
370.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
370.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
369.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
367.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
365.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
365.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
363.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
360.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
359.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
358.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
356.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
355.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
355.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
354.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
351.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
351.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
349.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
349.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
347.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
344.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
339.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
338.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
338.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
337.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
337.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
337.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
336.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
335.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
332.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
329.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
329.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
327.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
325.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
321.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
320.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
318.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
317.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
316.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
314.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
313.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
313.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
312.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
310.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
310.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
310.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
308.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
308.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
307.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
307.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
307.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
306.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
305.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
304.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
304.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
301.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
301.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
300.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
299.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
297.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
297.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
296.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
294.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
290.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
289.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
287.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
286.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
284.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
282.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
281.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
279.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
278.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
277.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
272.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
272.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
272.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
271.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
271.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
270.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
270.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
269.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
269.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
267.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
267.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
267.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
263.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
262.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
259.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
258.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
255.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
254.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
254.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
250.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
250.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
249.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
249.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
248.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
247.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
247.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
244.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
237.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
235.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
229.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
229.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
226.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
226.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
223.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
223.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
222.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
221.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
219.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
217.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
216.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
214.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
214.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
211.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
211.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
210.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
209.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
207.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
204.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
201.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
201.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
201.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
201.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
200.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
200.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
197.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
196.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
195.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
195.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
195.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
192.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
191.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
191.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
186.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
180.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
180.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
180.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
178.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
178.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
177.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
177.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
176.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
175.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
172.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
171.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
171.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
169.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
168.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
168.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
168.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
166.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
164.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
164.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
163.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
163.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
162.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
161.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
160.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
159.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
159.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
159.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
158.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
156.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
156.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
151.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
150.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
148.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
145.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
143.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
143.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
142.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
140.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
140.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
136.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
136.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
134.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
130.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
129.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
128.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
121.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
120.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
120.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
119.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
118.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
117.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
115.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
114.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
110.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
108.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
105.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
102.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
102.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
101.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
100.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
98.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
97.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
96.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
95.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
93.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
92.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
88.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
85.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
85.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
82.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
81.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
79.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
78.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
77.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
74.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
73.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
71.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
70.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
69.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
68.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
63.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
57.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
56.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
52.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
51.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
49.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
49.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
45.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
45.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
44.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
41.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
33.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
17.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
502.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
2590.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
1546.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
1220.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1090.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1037.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
974.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
973.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
915.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
912.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
895.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
883.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
795.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
774.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
760.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
747.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
708.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
702.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
702.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
697.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
689.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
638.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
628.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
623.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
620.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
607.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
599.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
589.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
580.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
577.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
577.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
575.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
574.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
574.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
570.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
562.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
559.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
557.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
552.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
550.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
521.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
505.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
499.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
493.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
490.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
485.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
477.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
472.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
456.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
452.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
450.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
438.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
416.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
407.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
394.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
390.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
388.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
383.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
378.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
373.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
371.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
360.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
354.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
351.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
350.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
346.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
336.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
336.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
335.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
332.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
332.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
330.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
318.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
315.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
315.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
310.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
308.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
305.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
301.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
297.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
294.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
286.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
281.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
245.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
239.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
237.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
224.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
210.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
209.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
198.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
194.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
182.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
180.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
162.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
161.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
155.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
152.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
136.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
119.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
89.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
291.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2206.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2169.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1628.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1570.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1492.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1418.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1354.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1316.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1287.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1274.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1236.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1195.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1090.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1058.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1040.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1016.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1010.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1004.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
975.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
955.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
924.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
919.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
895.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
873.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
860.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
845.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
843.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
828.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
807.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
801.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
795.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
786.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
784.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
777.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
776.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
748.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
729.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
723.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
721.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
719.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
692.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
688.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
677.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
672.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
669.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
668.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
660.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
659.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
657.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
647.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
629.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
625.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
625.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
620.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
610.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
610.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
606.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
604.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
593.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
577.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
572.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
570.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
564.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
559.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
549.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
543.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
526.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
517.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
516.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
504.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
489.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
488.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
475.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
469.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
464.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
460.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
458.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
453.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
437.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
427.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
406.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
399.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
395.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
394.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
392.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
387.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
373.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
368.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
356.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
351.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
348.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
346.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
344.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
320.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
319.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
310.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
306.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
299.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
297.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
287.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
286.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
277.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
271.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
264.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
262.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
262.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
254.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
248.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
235.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
231.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
177.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
177.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
175.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
171.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
167.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
165.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
158.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
151.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
139.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
115.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
113.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
112.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
105.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
104.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
104.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
101.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
99.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
98.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
92.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
92.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
91.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
90.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
87.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
83.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
81.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
80.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
78.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
77.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
77.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
76.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
75.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
75.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
74.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
72.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
71.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
71.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
70.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
69.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
66.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
63.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
61.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
60.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
60.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
60.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
60.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
59.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
54.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
54.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
54.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
53.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
53.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
52.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
52.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
52.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
52.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
51.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
51.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
50.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
48.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
46.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
45.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
44.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
44.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
43.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
42.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
41.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
39.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
39.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
35.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
35.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
34.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
34.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
33.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
33.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
33.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
32.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
32.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
30.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
28.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
28.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
28.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
27.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
23.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
21.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
16.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
9.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
2.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
2.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
2.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
2.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
2.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
1.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
1.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0023350003
Tumor
1.1
CPT0002350011
Tumor
1.0
CPT0001340003
Tumor
1.0
CPT0084560003
Tumor
0.8
CPT0079410003
Tumor
0.8
CPT0017850003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0088690003
Tumor
0.6
CPT0076330003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0077320001
Normal
0.6
CPT0012550003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0079480003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0078660003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0088760003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0020130001
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0025350003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0081990003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0012280003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0077110003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0025060001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0087050003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0006530001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0063330001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0066520001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0065810003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0014160003
Tumor
-0.3
CPT0012090003
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0000790001
Normal
-0.3
CPT0025610001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0017410003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0000660001
Normal
-0.6
CPT0012640003
Normal
-0.7
CPT0001230001
Normal
-0.8
CPT0012770003
Normal
-0.8
CPT0009080003
Normal
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
