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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
635.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2854.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2841.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2529.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2333.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2315.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2224.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2159.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2084.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2028.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1980.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1976.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1944.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1911.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1894.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1780.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1779.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1723.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1687.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1648.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1571.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1525.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1513.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1508.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1393.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1392.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1391.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1380.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1319.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1305.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1302.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1272.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1257.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1228.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1222.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1209.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1197.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1191.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1141.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1137.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1127.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1116.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1110.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1110.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1072.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1071.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1069.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1058.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1054.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1049.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1042.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1029.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1012.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1002.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1000.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
999.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
990.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
988.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
987.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
985.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
973.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
963.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
961.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
950.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
938.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
937.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
937.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
929.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
925.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
923.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
914.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
914.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
908.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
901.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
894.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
889.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
880.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
875.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
874.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
859.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
858.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
852.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
848.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
846.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
827.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
825.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
816.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
804.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
797.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
787.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
787.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
767.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
767.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
766.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
763.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
762.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
760.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
758.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
751.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
750.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
750.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
742.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
740.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
739.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
725.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
711.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
707.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
706.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
704.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
703.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
702.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
701.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
699.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
699.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
698.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
694.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
693.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
679.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
679.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
678.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
677.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
673.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
673.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
671.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
664.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
664.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
663.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
660.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
653.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
651.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
647.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
646.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
646.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
642.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
640.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
633.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
633.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
629.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
625.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
625.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
623.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
622.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
621.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
620.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
617.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
616.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
614.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
612.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
608.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
607.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
599.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
599.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
598.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
596.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
596.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
594.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
592.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
591.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
584.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
581.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
580.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
580.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
577.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
573.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
572.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
558.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
556.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
553.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
552.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
549.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
547.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
545.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
544.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
544.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
544.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
532.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
531.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
531.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
529.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
527.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
525.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
523.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
522.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
518.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
517.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
516.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
516.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
512.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
508.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
505.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
503.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
502.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
501.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
500.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
500.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
494.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
493.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
492.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
491.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
490.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
488.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
487.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
485.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
481.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
475.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
474.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
468.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
468.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
468.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
467.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
465.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
464.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
461.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
459.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
459.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
455.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
449.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
449.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
448.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
446.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
446.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
444.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
444.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
444.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
441.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
440.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
435.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
430.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
426.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
423.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
423.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
423.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
419.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
419.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
417.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
414.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
409.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
405.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
405.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
404.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
401.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
401.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
393.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
388.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
387.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
386.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
383.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
374.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
364.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
363.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
362.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
358.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
357.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
354.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
354.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
353.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
351.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
351.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
349.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
345.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
344.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
344.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
342.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
341.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
334.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
324.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
323.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
319.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
319.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
317.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
315.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
313.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
308.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
304.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
302.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
300.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
299.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
299.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
295.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
294.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
291.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
291.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
289.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
288.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
284.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
280.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
277.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
273.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
271.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
266.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
265.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
261.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
260.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
256.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
255.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
249.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
248.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
248.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
248.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
246.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
239.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
238.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
238.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
238.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
236.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
235.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
232.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
232.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
230.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
229.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
224.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
223.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
218.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
218.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
217.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
215.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
212.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
211.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
211.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
210.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
209.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
208.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
208.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
205.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
204.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
204.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
203.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
203.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
200.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
199.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
198.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
196.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
195.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
188.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
187.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
187.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
186.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
184.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
184.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
183.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
179.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
168.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
166.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
166.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
161.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
152.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
151.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
146.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
145.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
142.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
141.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
140.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
139.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
132.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
119.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
116.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
113.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
90.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
85.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
82.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
59.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
708.0
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
2597.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
2400.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
1958.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
1866.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
1766.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
1660.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
1596.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
1451.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1426.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
1390.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1384.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
1377.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1360.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1293.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1262.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
1242.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
1236.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
1227.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
1199.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
1197.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
1188.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
1187.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
1157.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
1149.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1146.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
1138.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
1126.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
1104.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
1096.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
1072.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
1064.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
1063.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
1061.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1050.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
1048.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1044.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
1035.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1022.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1015.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
1004.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
996.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
985.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
984.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
966.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
959.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
954.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
946.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
934.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
928.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
922.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
922.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
907.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
902.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
890.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
880.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
873.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
872.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
867.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
852.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
850.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
838.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
836.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
835.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
832.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
825.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
814.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
814.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
813.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
778.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
777.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
777.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
777.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
776.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
769.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
762.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
759.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
751.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
746.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
741.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
739.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
735.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
733.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
730.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
730.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
729.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
725.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
722.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
720.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
718.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
718.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
707.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
705.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
693.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
693.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
687.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
680.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
667.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
663.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
660.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
658.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
650.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
649.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
641.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
638.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
636.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
634.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
633.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
632.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
631.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
627.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
621.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
618.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
616.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
616.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
615.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
613.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
610.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
604.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
604.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
603.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
602.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
601.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
601.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
600.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
599.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
591.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
588.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
586.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
585.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
583.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
576.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
574.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
573.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
563.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
561.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
560.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
560.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
556.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
554.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
553.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
550.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
544.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
544.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
542.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
540.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
537.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
535.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
535.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
532.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
529.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
517.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
512.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
510.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
509.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
504.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
501.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
500.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
498.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
494.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
493.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
492.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
492.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
490.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
489.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
489.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
487.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
484.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
484.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
483.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
483.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
477.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
475.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
475.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
474.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
467.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
463.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
462.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
461.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
461.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
457.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
456.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
453.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
451.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
447.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
445.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
441.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
427.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
424.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
422.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
420.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
418.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
414.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
407.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
404.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
404.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
397.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
395.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
395.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
388.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
387.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
382.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
378.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
375.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
374.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
372.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
371.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
370.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
366.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
363.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
362.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
356.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
355.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
354.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
349.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
349.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
339.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
335.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
333.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
327.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
325.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
308.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
299.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
298.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
289.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
282.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
281.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
280.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
277.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
272.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
224.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
202.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.6
537
Tumor
0.6
1021
Tumor
0.5
331
Tumor
0.5
367
Tumor
0.5
965
Tumor
0.5
113
Tumor
0.5
327
Tumor
0.4
131
Tumor
0.4
727
Tumor
0.4
393
Tumor
0.4
285
Tumor
0.4
387
Tumor
0.4
815
Tumor
0.4
851
Tumor
0.4
697
Tumor
0.4
983
Tumor
0.4
957
Tumor
0.4
353
Tumor
0.4
267
Tumor
0.3
1027
Tumor
0.3
535
Tumor
0.3
937
Tumor
0.3
636
Normal
0.3
523
Tumor
0.3
567
Tumor
0.3
385
Tumor
0.3
1025
Tumor
0.3
685
Tumor
0.3
545
Tumor
0.3
955
Tumor
0.3
332
Normal
0.3
223
Tumor
0.3
661
Tumor
0.3
944
Normal
0.3
413
Tumor
0.3
514
Normal
0.3
467
Tumor
0.3
967
Tumor
0.3
524
Normal
0.3
951
Tumor
0.3
136
Normal
0.2
1014
Normal
0.2
536
Normal
0.2
1031
Tumor
0.2
1032
Normal
0.2
922
Normal
0.2
448
Normal
0.2
517
Tumor
0.2
824
Normal
0.2
231
Tumor
0.2
923
Tumor
0.2
395
Tumor
0.2
497
Tumor
0.2
1044
Normal
0.2
526
Normal
0.2
724
Normal
0.2
628
Normal
0.2
481
Tumor
0.2
314
Normal
0.2
558
Normal
0.2
112
Tumor
0.2
978
Normal
0.2
728
Normal
0.2
191
Tumor
0.2
358
Normal
0.2
135
Tumor
0.2
221
Tumor
0.2
187
Tumor
0.2
926
Normal
0.2
1046
Normal
0.2
376
Normal
0.2
518
Normal
0.2
128
Normal
0.2
484
Normal
0.2
981
Tumor
0.2
938
Normal
0.2
212
Normal
0.2
431
Tumor
0.2
756
Normal
0.2
525
Tumor
0.2
488
Normal
0.2
777
Tumor
0.2
533
Tumor
0.2
443
Tumor
0.2
515
Tumor
0.2
214
Normal
0.2
617
Tumor
0.2
195
Tumor
0.2
111
Normal
0.2
218
Normal
0.2
852
Normal
0.2
1026
Normal
0.2
858
Normal
0.2
984
Normal
0.2
1022
Normal
0.2
528
Normal
0.2
114
Normal
0.2
918
Normal
0.2
723
Tumor
0.2
451
Tumor
0.2
172
Normal
0.2
527
Tumor
0.2
1043
Tumor
0.2
573
Tumor
0.2
222
Normal
0.2
427
Tumor
0.2
953
Tumor
0.2
743
Tumor
0.2
865
Tumor
0.2
1042
Normal
0.2
964
Normal
0.1
745
Tumor
0.1
351
Tumor
0.1
414
Normal
0.1
394
Normal
0.1
464
Normal
0.1
966
Normal
0.1
232
Normal
0.1
272
Normal
0.1
494
Normal
0.1
513
Tumor
0.1
362
Normal
0.1
866
Normal
0.1
912
Normal
0.1
568
Normal
0.1
228
Normal
0.1
421
Tumor
0.1
958
Normal
0.1
278
Normal
0.1
534
Normal
0.1
297
Tumor
0.1
356
Normal
0.1
616
Normal
0.1
186
Normal
0.1
147
Tumor
0.1
257
Tumor
0.1
492
Normal
0.1
196
Normal
0.1
466
Normal
0.1
258
Normal
0.1
462
Normal
0.1
298
Normal
0.1
447
Tumor
0.1
452
Normal
0.1
445
Tumor
0.1
618
Normal
0.1
564
Normal
0.1
916
Normal
0.1
857
Tumor
0.1
213
Tumor
0.1
864
Normal
0.1
392
Normal
0.1
124
Normal
0.1
696
Normal
0.1
368
Normal
0.1
422
Normal
0.1
471
Tumor
0.1
277
Tumor
0.1
818
Normal
0.1
737
Tumor
0.1
162
Normal
0.1
412
Normal
0.1
1015
Tumor
0.1
432
Normal
0.1
1016
Normal
0.1
284
Normal
0.1
572
Normal
0.1
262
Normal
0.1
571
Tumor
0.1
436
Normal
0.1
873
Tumor
0.1
132
Normal
0.1
554
Normal
0.1
493
Tumor
0.1
483
Tumor
0.1
342
Normal
0.1
352
Normal
0.1
171
Tumor
0.1
817
Tumor
0.1
778
Normal
0.1
271
Tumor
0.1
516
Normal
0.1
312
Normal
0.1
344
Normal
0.1
862
Normal
0.1
1028
Normal
0.1
361
Tumor
0.1
426
Normal
0.1
642
Normal
0.1
211
Tumor
0.1
982
Normal
0.1
686
Normal
0.1
882
Normal
0.1
698
Normal
0.1
738
Normal
0.1
142
Normal
0.1
396
Normal
0.1
913
Tumor
0.1
474
Normal
0.1
127
Tumor
0.1
217
Tumor
0.1
672
Normal
0.1
145
Tumor
0.1
375
Tumor
0.1
924
Normal
0.1
388
Normal
0.1
956
Normal
0.1
546
Normal
0.1
746
Normal
0.1
785
Tumor
0.1
671
Tumor
0.1
148
Normal
0.1
963
Tumor
0.1
473
Tumor
0.1
446
Normal
0.0
755
Tumor
0.0
952
Normal
0.0
286
Normal
0.0
434
Normal
0.0
313
Tumor
0.0
463
Tumor
0.0
268
Normal
0.0
915
Tumor
0.0
123
Tumor
0.0
715
Tumor
0.0
384
Normal
0.0
355
Tumor
0.0
648
Normal
0.0
125
Tumor
0.0
662
Normal
0.0
721
Tumor
0.0
472
Normal
0.0
428
Normal
0.0
925
Tumor
0.0
126
Normal
0.0
647
Tumor
0.0
917
Tumor
0.0
664
Normal
0.0
968
Normal
0.0
878
Normal
0.0
138
Normal
0.0
435
Tumor
0.0
868
Normal
0.0
742
Normal
0.0
468
Normal
0.0
423
Tumor
0.0
1041
Tumor
0.0
574
Normal
0.0
877
Tumor
0.0
823
Tumor
0.0
357
Tumor
0.0
538
Normal
0.0
615
Tumor
0.0
635
Tumor
0.0
365
Tumor
0.0
921
Tumor
0.0
861
Tumor
0.0
786
Normal
0.0
433
Tumor
0.0
975
Tumor
0.0
695
Tumor
0.0
943
Tumor
0.0
283
Tumor
0.0
482
Normal
0.0
386
Normal
0.0
328
Normal
0.0
461
Tumor
0.0
137
Tumor
0.0
411
Tumor
0.0
425
Tumor
0.0
884
Normal
0.0
713
Tumor
0.0
1013
Tumor
0.0
954
Normal
0.0
224
Normal
0.0
185
Tumor
0.0
424
Normal
0.0
478
Normal
0.0
491
Tumor
0.0
714
Normal
0.0
976
Normal
0.0
391
Tumor
0.0
261
Tumor
0.0
161
Tumor
0.0
415
Tumor
0.0
867
Tumor
0.0
366
Normal
0.0
227
Tumor
0.0
665
Tumor
0.0
465
Tumor
0.0
456
Normal
0.0
487
Tumor
0.0
311
Tumor
0.0
977
Tumor
0.0
363
Tumor
0.0
188
Normal
0.0
477
Tumor
0.0
881
Tumor
0.0
455
Tumor
0.0
722
Normal
0.0
354
Normal
0.0
716
Normal
0.0
663
Tumor
-0.1
146
Normal
-0.1
141
Tumor
-0.1
814
Normal
-0.1
364
Normal
-0.1
563
Tumor
-0.1
816
Normal
-0.1
553
Tumor
-0.1
341
Tumor
-0.1
343
Tumor
-0.1
666
Normal
-0.1
813
Tumor
-0.1
641
Tumor
-0.1
914
Normal
-0.1
416
Normal
-0.1
874
Normal
-0.1
383
Tumor
-0.1
883
Tumor
-0.1
498
Normal
-0.1
911
Tumor
-0.1
192
Normal
-0.2
863
Tumor
-0.2
744
Normal
-0.2
1045
Tumor
-0.2
444
Normal
-0.2
627
Tumor
-0.2
741
Tumor
-0.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.