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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1193.3
Number of samples
349
Samples
Sample
Description
TPM
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
3544.4
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
3430.7
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
3340.1
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
3163.4
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2776.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
2745.1
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
2716.8
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
2670.4
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
2632.0
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2618.7
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
2584.5
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
2520.4
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2496.5
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2430.3
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
2389.7
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
2359.8
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
2317.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
2291.5
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
2229.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2219.3
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2209.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
2205.5
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
2173.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
2136.7
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2123.3
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
2122.4
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2118.5
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
2104.4
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2092.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2081.9
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
2063.4
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
2045.5
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
2043.7
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
2004.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1996.5
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1980.3
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1972.2
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1972.2
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1955.3
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1953.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1932.6
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1916.0
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1911.8
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1901.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1895.4
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1892.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1872.2
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
1865.5
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1862.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
1861.4
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1850.1
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1847.6
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1842.7
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1837.7
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1833.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1818.6
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1816.0
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1815.5
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1727.4
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1713.0
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1664.5
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1658.1
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1634.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1625.3
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1617.5
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1609.2
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1587.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1585.4
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1584.6
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1582.4
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1569.6
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1565.6
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1564.2
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1553.7
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1548.6
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1540.2
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1530.6
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1522.4
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1509.7
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1493.9
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1487.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1482.7
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1481.3
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1467.8
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1448.8
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1445.2
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1436.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
1432.2
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1429.3
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1426.8
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1422.9
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1415.4
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1412.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1409.1
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1408.0
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1407.3
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1388.6
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1386.4
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1371.1
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
1363.3
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1359.2
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1351.8
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1346.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1344.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1338.3
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1332.4
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1327.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1327.8
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1325.4
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1324.7
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
1323.9
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1312.9
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1291.5
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1290.0
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1275.4
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1268.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1266.3
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1265.9
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1265.7
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
1257.8
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1256.7
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1255.7
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1252.6
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1241.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1240.1
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1234.3
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1233.2
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1232.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1229.8
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1228.9
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1227.2
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1222.6
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
1220.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1219.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1217.0
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1211.3
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1210.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1207.5
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1204.6
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1202.2
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1199.1
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1192.4
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1188.3
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1185.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1183.1
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1178.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1166.9
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1164.6
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1163.2
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1162.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1160.4
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1156.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1155.3
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1152.8
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1149.5
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1137.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1131.3
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1131.1
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1129.5
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1125.8
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1124.3
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1116.6
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1111.1
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1109.7
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1108.3
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1107.5
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1107.5
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1104.4
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1103.8
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1103.1
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1098.1
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1097.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1093.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1092.0
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1079.7
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1075.5
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1069.3
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1065.1
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1059.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1055.5
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1053.0
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1046.8
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1046.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1043.7
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1043.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1042.1
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1040.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1038.5
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1038.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1035.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1033.1
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1030.9
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1030.9
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1030.3
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1024.4
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1017.0
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1012.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1011.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1009.8
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1007.6
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1001.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1001.7
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
999.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
995.6
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
991.2
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
991.0
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
989.0
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
985.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
985.7
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
980.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
976.0
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
975.6
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
974.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
972.5
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
966.8
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
963.3
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
960.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
954.6
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
954.4
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
949.8
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
947.4
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
945.5
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
944.9
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
940.9
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
940.8
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
928.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
926.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
926.4
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
923.0
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
911.0
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
903.9
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
903.6
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
896.6
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
896.4
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
896.1
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
893.5
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
890.3
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
888.5
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
883.8
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
883.2
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
881.8
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
881.1
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
880.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
879.3
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
877.3
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
873.0
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
869.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
868.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
858.8
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
857.7
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
856.0
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
855.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
849.9
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
844.1
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
843.9
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
841.9
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
834.6
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
831.4
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
827.0
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
826.2
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
823.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
822.9
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
818.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
815.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
811.6
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
810.9
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
810.7
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
808.5
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
807.0
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
799.6
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
796.6
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
789.2
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
788.6
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
784.9
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
779.4
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
778.6
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
774.6
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
774.4
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
758.4
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
756.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
749.6
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
748.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
747.4
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
746.0
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
737.5
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
736.7
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
725.0
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
724.0
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
723.1
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
722.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
719.5
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
715.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
713.1
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
710.9
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
710.8
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
710.7
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
708.1
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
696.8
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
695.1
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
680.3
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
678.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
671.4
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
667.4
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
662.2
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
653.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
649.6
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
649.4
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
629.2
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
626.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
622.5
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
616.3
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
598.1
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
596.7
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
595.0
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
592.1
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
578.6
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
577.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
563.0
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
556.5
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
556.1
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
556.1
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
556.0
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
554.4
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
553.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
539.1
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
523.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
517.9
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
506.0
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
494.6
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
492.8
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
467.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
458.6
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
456.0
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
455.2
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
444.4
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
425.6
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
420.8
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
401.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
369.3
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
368.6
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
161.2
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
145.8
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
135.8
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
114.6
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
112.0
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
97.9
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
79.5
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
18.5
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS9 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1631.3
Number of samples
81
Samples
Sample
Description
TPM
DO46333
0 years, female, NA, stage:III, dead, 359 days
4301.9
DO46366
0 years, female, NA, stage:III, dead, 2054 days
4193.2
DO46611
0 years, female, NA, stage:III, dead, 734 days
4066.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
3836.5
DO46538
0 years, female, NA, stage:III, dead, 1527 days
3513.1
DO46576
0 years, female, NA, stage:III, alive, 133 days
3456.4
DO46384
0 years, female, NA, stage:III, dead, 614 days
3014.2
DO46356
0 years, female, NA, stage:III, dead, 911 days
2976.1
DO46338
0 years, female, NA, stage:III, dead, 596 days
2765.3
DO46331
0 years, female, NA, stage:III, dead, 612 days
2363.2
DO46326
0 years, female, NA, stage:III, dead, 701 days
2334.2
DO46591
0 years, female, NA, stage:III, dead, 195 days
2276.1
DO46551
0 years, female, NA, stage:III, dead, 1055 days
2175.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
2127.3
DO46390
0 years, female, NA, stage:III, dead, 374 days
2119.3
DO46342
0 years, female, NA, stage:III, dead, 1398 days
2108.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
2077.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
2031.5
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
2009.5
DO46352
0 years, female, NA, stage:III, dead, 677 days
1919.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
1873.6
DO46350
0 years, female, NA, stage:III, dead, 886 days
1815.3
DO46566
0 years, female, NA, stage:III, dead, 673 days
1729.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1728.4
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
1697.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1665.0
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1616.8
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1616.0
DO46398
0 years, female, NA, stage:III, alive, 437 days
1612.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
1599.4
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1579.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
1546.7
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1545.0
DO46581
0 years, female, NA, stage:III, dead, 408 days
1536.7
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1516.5
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1508.9
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1503.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1463.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
1429.8
DO46561
0 years, female, NA, stage:III, dead, 195 days
1423.1
DO46597
0 years, female, NA, stage:III, dead, 393 days
1419.2
DO46325
0 years, female, NA, stage:III, dead, 477 days
1405.7
DO46392
0 years, female, NA, stage:III, dead, 628 days
1404.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
1393.4
DO46400
0 years, female, NA, stage:III, dead, 719 days
1340.8
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1329.8
DO46408
0 years, female, NA, stage:III, dead, 489 days
1326.5
DO46358
0 years, female, NA, stage:III, dead, 423 days
1320.9
DO46328
0 years, female, NA, stage:III, dead, 972 days
1317.3
DO46334
0 years, female, NA, stage:III, dead, 496 days
1315.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1310.9
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1285.1
DO46330
0 years, female, NA, stage:III, dead, 684 days
1282.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
1277.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1255.5
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1224.4
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1217.2
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1216.9
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1196.3
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1136.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
1111.0
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1101.9
DO46436
0 years, female, NA, stage:III, alive, 3193 days
1069.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
1062.5
DO46354
0 years, female, NA, stage:III, dead, 843 days
1024.3
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1006.0
DO46362
0 years, female, NA, stage:III, dead, 1639 days
990.8
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
977.8
DO46448
0 years, female, NA, stage:III, dead, 654 days
931.9
DO46332
0 years, female, NA, stage:III, dead, 689 days
910.7
DO46382
0 years, female, NA, stage:IV, dead, 311 days
867.8
DO46396
0 years, female, NA, stage:III, dead, 583 days
867.0
DO46571
0 years, female, NA, stage:III, dead, 243 days
837.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
832.9
DO46588
0 years, female, NA, stage:III, dead, 438 days
803.0
DO46327
0 years, female, NA, stage:III, dead, 184 days
747.8
DO46606
0 years, female, NA, stage:III, alive, 804 days
725.8
DO46348
0 years, female, NA, stage:IV, dead, 287 days
716.3
DO46546
0 years, female, NA, stage:III, dead, 1889 days
688.4
DO46336
0 years, female, NA, stage:IV, dead, 664 days
629.5
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
591.7
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.9
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.5
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.4
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.2
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.2
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.1
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.1
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.1
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.5
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.5
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.5
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.6
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.6
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.6
15524912-685a-47ce-a824-567848_D2
Tumor
-0.7
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.7
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.7
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.7
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.7
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.7
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.8
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.8
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.8
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.8
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.8
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.9
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.9
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.9
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.9
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.9
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.9
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.9
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.9
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.9
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.9
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.0
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-1.0
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-1.0
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.0
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-1.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-1.1
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-1.1
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-1.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.2
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.2
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-1.2
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-1.2
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-1.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.3
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-1.3
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-1.3
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.3
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.3
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-1.3
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-1.3
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-1.3
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-1.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-1.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-1.4
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-1.5
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.5
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-1.5
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-1.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-1.5
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.5
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-1.5
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.5
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-1.6
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.6
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.6
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-1.6
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-1.6
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.7
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.7
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-1.7
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.8
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-1.8
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-1.8
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-1.8
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-1.8
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-1.8
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-1.9
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-2.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-2.0
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-2.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-2.0
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-2.0
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-2.1
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-2.1
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-2.1
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-2.2
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-2.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-2.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-2.3
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.