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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT8 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
793.4
Number of samples
349
Samples
Sample
Description
TPM
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
3566.4
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
3402.1
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2649.3
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
2631.5
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2466.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
2406.6
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
2058.6
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1965.7
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1964.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1958.0
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1958.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1915.4
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1871.2
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1858.9
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1843.1
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1758.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1752.7
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1752.5
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1735.4
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1731.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1728.6
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1691.3
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1646.7
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1642.7
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1600.1
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1567.5
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1513.0
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1493.2
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1483.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1474.3
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1460.8
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1456.2
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1451.2
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1426.8
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1365.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1358.5
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1354.6
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1350.0
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1337.6
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1330.6
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1323.8
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1314.4
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1300.2
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1290.4
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1264.2
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1262.0
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1260.7
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1254.3
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1250.1
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1242.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1238.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1238.6
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1235.0
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1230.4
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1226.4
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1197.7
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1195.0
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1178.1
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1169.3
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1149.7
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1149.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1149.4
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1145.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1145.7
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1116.8
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1116.5
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1115.2
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1106.1
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1089.6
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1086.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1084.1
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1079.0
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1051.6
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1048.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1035.4
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1032.7
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
1026.0
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1026.0
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1022.6
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1014.5
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1009.5
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1001.4
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
990.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
989.0
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
987.2
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
983.6
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
982.5
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
977.1
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
976.6
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
976.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
968.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
963.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
957.7
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
954.8
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
950.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
944.4
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
940.7
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
938.2
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
937.1
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
933.1
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
928.7
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
915.2
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
912.7
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
899.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
895.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
894.8
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
893.7
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
890.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
890.7
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
890.7
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
878.2
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
868.1
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
865.2
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
856.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
855.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
855.2
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
851.4
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
850.1
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
842.8
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
840.8
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
837.2
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
831.8
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
827.6
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
820.3
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
818.7
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
812.3
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
810.7
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
808.2
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
806.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
806.7
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
802.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
794.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
793.0
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
792.3
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
790.9
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
787.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
785.0
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
784.2
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
778.9
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
771.6
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
770.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
765.9
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
762.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
761.8
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
760.9
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
758.2
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
751.2
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
744.9
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
740.3
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
737.4
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
736.9
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
735.8
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
734.8
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
732.8
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
732.3
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
728.7
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
727.8
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
726.2
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
726.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
723.8
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
722.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
722.0
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
718.4
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
716.4
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
714.8
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
711.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
711.3
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
710.9
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
708.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
706.2
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
700.7
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
698.9
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
690.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
689.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
687.2
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
685.0
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
681.9
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
681.7
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
677.8
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
676.6
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
675.9
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
674.0
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
672.3
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
672.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
672.2
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
671.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
669.6
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
665.5
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
663.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
660.9
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
656.7
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
654.8
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
653.2
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
652.2
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
651.2
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
650.6
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
649.8
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
648.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
644.7
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
634.0
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
633.1
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
632.2
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
631.8
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
628.0
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
626.8
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
624.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
624.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
616.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
614.3
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
610.4
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
609.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
607.3
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
604.8
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
597.7
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
596.0
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
589.9
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
588.2
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
582.9
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
581.6
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
578.8
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
576.0
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
564.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
562.2
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
560.4
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
558.6
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
555.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
554.3
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
546.6
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
544.7
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
544.4
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
544.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
536.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
530.8
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
530.0
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
529.7
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
527.7
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
524.1
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
520.0
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
515.7
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
513.2
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
512.2
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
511.8
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
511.5
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
511.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
509.9
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
507.4
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
507.3
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
502.7
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
500.2
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
496.8
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
487.1
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
484.3
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
483.6
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
481.7
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
481.5
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
480.7
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
479.7
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
478.1
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
477.7
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
475.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
475.3
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
471.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
470.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
467.5
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
467.0
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
456.0
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
454.8
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
449.5
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
449.5
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
446.6
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
440.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
440.0
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
438.8
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
437.4
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
435.7
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
435.6
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
434.0
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
433.3
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
425.6
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
425.4
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
421.8
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
417.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
416.2
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
412.4
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
411.0
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
394.6
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
391.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
390.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
387.9
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
383.8
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
380.9
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
379.6
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
377.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
376.0
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
361.9
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
358.2
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
357.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
355.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
354.1
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
353.6
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
346.9
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
345.6
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
342.6
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
338.5
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
337.5
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
335.1
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
331.7
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
330.7
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
328.9
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
326.9
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
326.3
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
320.5
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
319.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
315.4
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
315.3
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
314.9
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
314.1
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
308.3
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
303.9
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
303.1
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
296.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
294.8
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
290.4
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
283.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
280.1
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
278.0
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
276.3
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
270.8
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
258.6
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
252.4
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
242.1
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
241.1
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
240.4
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
240.4
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
230.6
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
227.2
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
224.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
215.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
213.4
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
211.5
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
191.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
190.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
188.0
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
187.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
164.0
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
141.9
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
101.1
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
89.9
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT8 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
925.1
Number of samples
81
Samples
Sample
Description
TPM
DO46329
0 years, female, NA, stage:III, dead, 1699 days
4080.1
DO46453
0 years, female, NA, stage:III, dead, 3294 days
3424.9
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2623.4
DO46333
0 years, female, NA, stage:III, dead, 359 days
2201.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
1794.8
DO46370
0 years, female, NA, stage:III, dead, 1727 days
1480.2
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1394.2
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1373.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
1351.0
DO46331
0 years, female, NA, stage:III, dead, 612 days
1282.1
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1278.6
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1276.1
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1236.0
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1229.7
DO46408
0 years, female, NA, stage:III, dead, 489 days
1216.4
DO46404
0 years, female, NA, stage:III, dead, 690 days
1192.4
DO46326
0 years, female, NA, stage:III, dead, 701 days
1174.4
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1155.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1149.6
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1145.2
DO46597
0 years, female, NA, stage:III, dead, 393 days
1086.3
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1031.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1014.8
DO46528
0 years, female, NA, stage:III, alive, 6139 days
995.8
DO46508
0 years, female, NA, stage:III, dead, 2101 days
982.1
DO46352
0 years, female, NA, stage:III, dead, 677 days
971.6
DO46611
0 years, female, NA, stage:III, dead, 734 days
964.6
DO46348
0 years, female, NA, stage:IV, dead, 287 days
954.2
DO46396
0 years, female, NA, stage:III, dead, 583 days
947.3
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
942.4
DO46581
0 years, female, NA, stage:III, dead, 408 days
941.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
915.0
DO46364
0 years, female, NA, stage:III, dead, 806 days
891.0
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
850.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
846.1
DO46327
0 years, female, NA, stage:III, dead, 184 days
841.4
DO46346
0 years, female, NA, stage:III, dead, 1187 days
840.7
DO46336
0 years, female, NA, stage:IV, dead, 664 days
834.1
DO46448
0 years, female, NA, stage:III, dead, 654 days
822.7
DO46432
0 years, female, NA, stage:III, alive, 2218 days
816.9
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
787.3
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
770.9
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
770.6
DO46443
0 years, female, NA, stage:III, dead, 2464 days
770.4
DO46330
0 years, female, NA, stage:III, dead, 684 days
769.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
756.8
DO46561
0 years, female, NA, stage:III, dead, 195 days
709.9
DO46350
0 years, female, NA, stage:III, dead, 886 days
696.0
DO46388
0 years, female, NA, stage:III, dead, 413 days
691.5
DO46384
0 years, female, NA, stage:III, dead, 614 days
670.8
DO46362
0 years, female, NA, stage:III, dead, 1639 days
670.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
663.5
DO46392
0 years, female, NA, stage:III, dead, 628 days
661.0
DO46436
0 years, female, NA, stage:III, alive, 3193 days
652.3
DO46586
0 years, female, NA, stage:III, dead, 1019 days
650.8
DO46546
0 years, female, NA, stage:III, dead, 1889 days
643.8
DO46356
0 years, female, NA, stage:III, dead, 911 days
638.3
DO46338
0 years, female, NA, stage:III, dead, 596 days
635.3
DO46390
0 years, female, NA, stage:III, dead, 374 days
632.1
DO46588
0 years, female, NA, stage:III, dead, 438 days
624.1
DO46358
0 years, female, NA, stage:III, dead, 423 days
621.9
DO46332
0 years, female, NA, stage:III, dead, 689 days
612.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
599.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
595.3
DO46398
0 years, female, NA, stage:III, alive, 437 days
592.5
DO46328
0 years, female, NA, stage:III, dead, 972 days
577.1
DO46342
0 years, female, NA, stage:III, dead, 1398 days
575.7
DO46566
0 years, female, NA, stage:III, dead, 673 days
552.0
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
532.7
DO46402
0 years, female, NA, stage:III, dead, 511 days
505.3
DO46386
0 years, female, NA, stage:III, dead, 1162 days
493.4
DO46591
0 years, female, NA, stage:III, dead, 195 days
484.9
DO46576
0 years, female, NA, stage:III, alive, 133 days
478.5
DO46412
0 years, female, NA, stage:III, dead, 597 days
474.5
DO46571
0 years, female, NA, stage:III, dead, 243 days
473.3
DO46334
0 years, female, NA, stage:III, dead, 496 days
277.2
DO46606
0 years, female, NA, stage:III, alive, 804 days
260.3
DO46518
0 years, female, NA, stage:III, alive, 2960 days
257.5
DO46374
0 years, female, NA, stage:III, dead, 1409 days
251.4
DO46493
0 years, female, NA, stage:IV, alive, 839 days
250.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
55.6
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
1.7
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
1.7
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.5
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
1.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
1.1
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
1.0
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
1.0
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
1.0
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
1.0
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
1.0
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
1.0
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.9
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.9
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.9
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.8
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.8
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.8
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.8
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.7
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.7
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.7
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.6
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.5
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.5
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.5
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.5
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.4
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.4
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.4
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.4
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.4
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.4
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.4
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.4
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.3
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.3
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.3
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.3
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.3
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.3
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.3
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.3
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.3
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.2
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.2
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.2
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.2
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.2
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.2
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.1
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.1
15524912-685a-47ce-a824-567848_D2
Tumor
0.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.0
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.0
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.1
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.1
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.1
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.1
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.1
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.3
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.3
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.3
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.3
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.3
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.3
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.3
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.3
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.4
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.4
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.5
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.5
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.5
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.5
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.5
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.5
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.5
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.6
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.6
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.6
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.7
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.7
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.7
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.7
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.8
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
