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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT8 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
839.3
Number of samples
283
Samples
Sample
Description
TPM
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
5648.7
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
4868.0
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
4605.8
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
4551.9
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
3567.0
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
3337.4
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
3225.8
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
3181.8
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
3178.2
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
3177.6
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
2938.9
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
2796.2
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
2756.0
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
2704.5
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
2588.4
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
2470.0
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
2407.8
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
2407.2
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
2362.0
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
2351.9
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
2344.3
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
2324.9
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
2284.2
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
2254.6
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
2108.4
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
2050.9
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
2042.2
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
2017.9
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
1968.6
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
1948.8
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
1885.8
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
1882.3
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
1837.7
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
1789.5
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
1775.3
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
1713.8
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
1695.9
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
1686.3
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
1680.8
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
1664.3
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
1618.0
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
1599.1
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
1546.4
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
1532.1
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
1519.2
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
1493.9
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
1489.7
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
1481.8
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
1481.3
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
1479.9
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
1477.1
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
1397.2
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
1396.9
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
1394.2
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
1376.5
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
1371.0
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
1370.8
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
1352.0
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
1346.1
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
1345.8
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
1344.0
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
1319.7
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
1294.3
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
1261.7
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
1251.4
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
1249.2
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
1236.4
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
1221.9
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
1221.8
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
1221.7
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
1216.0
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
1179.6
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
1164.5
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
1151.9
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
1123.6
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
1105.0
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
1070.3
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
1057.6
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
1052.0
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
1045.6
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
1043.9
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
1041.9
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
1037.7
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
1037.1
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
1030.5
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
1024.8
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
1023.6
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
1015.7
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
1011.1
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
1009.5
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
997.4
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
964.4
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
961.2
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
952.1
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
945.8
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
930.9
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
913.2
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
899.2
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
892.1
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
887.0
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
884.4
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
883.8
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
866.5
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
862.8
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
859.0
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
857.5
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
844.7
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
843.0
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
842.1
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
835.0
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
807.4
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
804.7
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
800.6
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
780.7
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
777.9
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
776.0
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
762.9
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
746.9
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
733.2
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
732.6
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
731.3
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
719.2
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
718.8
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
717.5
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
711.9
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
695.4
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
693.3
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
685.5
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
684.8
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
675.5
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
669.7
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
663.6
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
659.1
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
641.2
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
617.5
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
606.4
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
599.8
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
599.7
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
580.2
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
572.3
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
568.8
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
563.1
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
557.6
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
548.0
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
534.2
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
529.4
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
515.5
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
510.8
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
505.4
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
504.8
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
499.3
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
489.6
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
478.9
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
465.9
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
459.9
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
458.2
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
443.6
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
440.9
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
440.4
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
438.8
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
436.3
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
421.7
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
418.1
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
417.2
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
410.4
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
407.4
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
406.1
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
401.9
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
400.3
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
390.7
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
387.3
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
377.8
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
375.9
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
365.0
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
358.4
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
358.4
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
345.7
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
344.5
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
344.4
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
342.6
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
342.5
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
333.2
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
329.5
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
326.4
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
315.8
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
307.4
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
301.1
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
292.6
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
292.5
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
292.4
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
283.1
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
282.5
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
279.5
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
277.5
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
264.1
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
263.1
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
261.2
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
258.8
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
257.6
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
256.4
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
244.3
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
242.1
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
241.6
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
236.7
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
220.1
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
219.7
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
210.4
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
209.6
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
201.5
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
199.8
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
197.8
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
197.6
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
189.5
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
182.8
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
180.2
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
180.2
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
177.4
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
173.5
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
166.3
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
162.4
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
161.6
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
161.2
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
157.3
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
153.0
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
150.8
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
149.9
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
148.9
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
147.7
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
144.1
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
141.5
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
133.5
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
129.4
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
116.3
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
113.9
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
106.0
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
102.1
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
100.9
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
96.6
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
93.3
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
90.7
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
88.1
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
87.5
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
85.7
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
79.8
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
71.5
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
70.6
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
69.7
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
56.3
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
55.0
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
54.6
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
53.9
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
52.3
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
50.3
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
35.6
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
34.6
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
28.5
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
25.0
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
23.8
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
20.8
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
20.7
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
20.3
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
18.2
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
17.0
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
16.4
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
15.7
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
15.5
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
15.5
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
14.2
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
13.9
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
13.3
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
12.9
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
12.7
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
12.5
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
10.9
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
9.4
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
8.6
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
8.5
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
8.1
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
7.2
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
6.9
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
4.9
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
4.3
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
2.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.