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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5ME is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
489.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2193.0
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1896.5
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1668.0
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1661.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1602.6
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1507.5
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1368.2
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1280.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1215.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1173.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1161.7
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1155.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1142.0
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1138.3
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1098.5
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1075.8
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1057.6
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1051.0
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1038.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1032.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1032.8
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
981.7
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
978.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
922.2
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
913.1
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
906.1
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
902.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
897.2
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
896.6
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
881.9
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
877.5
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
873.8
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
866.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
861.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
835.3
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
834.6
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
833.1
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
828.4
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
810.4
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
803.6
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
800.5
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
799.5
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
798.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
796.2
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
793.1
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
793.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
792.2
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
790.9
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
781.2
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
779.3
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
773.5
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
767.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
760.7
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
755.6
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
755.6
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
751.5
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
747.1
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
746.3
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
741.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
737.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
735.9
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
722.0
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
721.4
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
710.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
704.3
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
701.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
699.7
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
694.2
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
683.2
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
679.2
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
676.6
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
668.9
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
665.5
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
659.8
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
658.0
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
656.6
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
650.3
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
647.8
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
639.2
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
637.5
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
632.5
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
623.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
614.8
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
614.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
613.1
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
608.6
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
606.3
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
586.8
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
583.1
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
581.7
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
580.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
580.7
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
577.9
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
572.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
571.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
568.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
566.3
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
565.2
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
565.1
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
563.7
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
560.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
557.8
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
553.7
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
553.6
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
549.2
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
543.6
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
543.3
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
540.6
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
539.4
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
539.4
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
538.7
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
537.6
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
532.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
531.8
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
530.5
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
522.8
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
515.9
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
512.9
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
510.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
506.3
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
505.1
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
504.5
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
503.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
502.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
501.1
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
500.8
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
500.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
496.7
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
493.2
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
493.0
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
485.6
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
481.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
480.7
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
480.5
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
480.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
475.5
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
474.5
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
471.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
471.2
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
469.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
469.2
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
465.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
463.7
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
461.2
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
458.7
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
456.6
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
451.8
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
448.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
445.8
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
445.0
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
442.1
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
440.5
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
439.2
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
439.0
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
438.4
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
437.6
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
437.5
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
435.2
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
430.4
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
429.4
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
426.6
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
425.3
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
423.2
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
421.7
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
417.3
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
415.2
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
414.8
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
412.1
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
408.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
407.1
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
406.1
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
403.5
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
401.7
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
400.7
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
400.7
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
399.9
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
395.0
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
394.6
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
388.4
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
384.9
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
381.8
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
379.8
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
377.7
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
377.0
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
376.2
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
375.2
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
374.9
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
373.7
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
373.6
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
373.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
373.4
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
372.9
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
372.8
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
372.6
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
371.5
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
368.0
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
366.9
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
366.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
365.4
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
364.8
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
363.9
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
360.5
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
360.4
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
360.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
359.8
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
358.5
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
358.2
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
357.4
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
357.0
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
356.3
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
354.4
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
353.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
351.8
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
350.7
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
350.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
350.1
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
347.4
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
346.8
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
344.7
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
343.0
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
342.6
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
341.9
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
341.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
340.5
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
339.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
339.0
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
337.7
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
335.8
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
331.6
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
330.2
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
329.4
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
328.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
328.3
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
327.0
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
327.0
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
326.3
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
324.5
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
324.2
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
323.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
322.6
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
322.0
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
320.7
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
320.4
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
318.7
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
317.9
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
317.3
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
315.0
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
313.5
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
312.9
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
311.4
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
311.2
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
309.8
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
309.5
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
307.8
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
306.9
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
306.0
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
304.2
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
299.1
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
299.0
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
298.2
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
297.9
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
297.3
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
291.3
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
289.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
289.2
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
289.0
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
287.5
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
286.0
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
285.3
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
285.0
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
284.2
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
282.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
280.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
280.4
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
275.7
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
274.7
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
273.5
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
273.3
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
272.5
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
272.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
270.4
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
269.6
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
267.2
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
266.9
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
266.8
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
265.0
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
264.1
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
263.4
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
262.1
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
261.4
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
260.9
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
258.4
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
258.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
253.9
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
253.9
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
252.7
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
249.6
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
246.2
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
243.9
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
242.0
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
241.8
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
241.5
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
241.1
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
240.8
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
238.3
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
237.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
236.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
234.4
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
233.1
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
225.1
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
224.9
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
224.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
224.3
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
223.5
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
223.1
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
222.5
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
220.2
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
218.8
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
215.0
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
210.2
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
207.3
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
204.3
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
203.7
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
203.6
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
203.4
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
201.3
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
200.6
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
199.7
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
199.6
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
199.0
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
195.7
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
192.6
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
191.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
189.1
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
185.6
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
181.4
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
178.4
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
177.4
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
174.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
173.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
169.5
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
160.1
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
159.4
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
155.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
153.2
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
146.7
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
142.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
136.6
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5ME is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
566.2
Number of samples
81
Samples
Sample
Description
TPM
DO46366
0 years, female, NA, stage:III, dead, 2054 days
2010.0
DO46611
0 years, female, NA, stage:III, dead, 734 days
1867.5
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1838.8
DO46333
0 years, female, NA, stage:III, dead, 359 days
1544.2
DO46390
0 years, female, NA, stage:III, dead, 374 days
1239.3
DO46576
0 years, female, NA, stage:III, alive, 133 days
1236.0
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1160.6
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1142.6
DO46581
0 years, female, NA, stage:III, dead, 408 days
1100.5
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1021.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
952.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
947.0
DO46538
0 years, female, NA, stage:III, dead, 1527 days
868.8
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
788.9
DO46368
0 years, female, NA, stage:III, dead, 2879 days
760.0
DO46370
0 years, female, NA, stage:III, dead, 1727 days
757.7
DO46331
0 years, female, NA, stage:III, dead, 612 days
707.7
DO46392
0 years, female, NA, stage:III, dead, 628 days
707.2
DO46352
0 years, female, NA, stage:III, dead, 677 days
703.2
DO46372
0 years, female, NA, stage:III, dead, 1326 days
703.2
DO46356
0 years, female, NA, stage:III, dead, 911 days
701.4
DO46551
0 years, female, NA, stage:III, dead, 1055 days
696.3
DO46342
0 years, female, NA, stage:III, dead, 1398 days
694.6
DO46376
0 years, female, NA, stage:III, dead, 1430 days
685.6
DO46336
0 years, female, NA, stage:IV, dead, 664 days
642.7
DO46364
0 years, female, NA, stage:III, dead, 806 days
640.8
DO46332
0 years, female, NA, stage:III, dead, 689 days
625.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
614.4
DO46453
0 years, female, NA, stage:III, dead, 3294 days
584.2
DO46518
0 years, female, NA, stage:III, alive, 2960 days
570.2
DO46528
0 years, female, NA, stage:III, alive, 6139 days
547.9
DO46328
0 years, female, NA, stage:III, dead, 972 days
532.4
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
527.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
520.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
516.7
DO46329
0 years, female, NA, stage:III, dead, 1699 days
513.1
DO46325
0 years, female, NA, stage:III, dead, 477 days
497.2
DO46386
0 years, female, NA, stage:III, dead, 1162 days
466.5
DO46443
0 years, female, NA, stage:III, dead, 2464 days
460.2
DO46448
0 years, female, NA, stage:III, dead, 654 days
455.5
DO46493
0 years, female, NA, stage:IV, alive, 839 days
449.8
DO46358
0 years, female, NA, stage:III, dead, 423 days
436.9
DO46400
0 years, female, NA, stage:III, dead, 719 days
432.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
432.0
DO46468
0 years, female, NA, stage:III, alive, 2776 days
429.0
DO46350
0 years, female, NA, stage:III, dead, 886 days
426.4
DO46508
0 years, female, NA, stage:III, dead, 2101 days
419.2
DO46344
0 years, female, NA, stage:III, dead, 642 days
416.7
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
415.1
DO46566
0 years, female, NA, stage:III, dead, 673 days
405.8
DO46412
0 years, female, NA, stage:III, dead, 597 days
399.1
DO46330
0 years, female, NA, stage:III, dead, 684 days
380.7
DO46378
0 years, female, NA, stage:III, alive, 843 days
353.5
DO46334
0 years, female, NA, stage:III, dead, 496 days
347.7
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
341.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
333.9
DO46374
0 years, female, NA, stage:III, dead, 1409 days
330.5
DO46388
0 years, female, NA, stage:III, dead, 413 days
315.0
DO46348
0 years, female, NA, stage:IV, dead, 287 days
307.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
295.2
DO46568
0 years, female, NA, stage:III, dead, 320 days
291.3
DO46432
0 years, female, NA, stage:III, alive, 2218 days
284.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
277.0
DO46561
0 years, female, NA, stage:III, dead, 195 days
273.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
265.0
DO46588
0 years, female, NA, stage:III, dead, 438 days
255.2
DO46382
0 years, female, NA, stage:IV, dead, 311 days
247.0
DO46338
0 years, female, NA, stage:III, dead, 596 days
242.9
DO46326
0 years, female, NA, stage:III, dead, 701 days
221.7
DO46327
0 years, female, NA, stage:III, dead, 184 days
218.0
DO46346
0 years, female, NA, stage:III, dead, 1187 days
214.9
DO46396
0 years, female, NA, stage:III, dead, 583 days
209.8
DO46354
0 years, female, NA, stage:III, dead, 843 days
203.9
DO46602
0 years, female, NA, stage:III, dead, 205 days
193.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
189.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
185.8
DO46398
0 years, female, NA, stage:III, alive, 437 days
184.1
DO46384
0 years, female, NA, stage:III, dead, 614 days
181.0
DO46436
0 years, female, NA, stage:III, alive, 3193 days
179.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
175.7
DO46404
0 years, female, NA, stage:III, dead, 690 days
153.5
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
2.4
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.9
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
1.5
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
1.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
1.4
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
1.4
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
1.4
161317f3-1a39-438e-af45-cd2502_D2
Tumor
1.3
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
1.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
1.2
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
1.2
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
1.1
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
1.1
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
1.1
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
1.1
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
1.0
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
1.0
340a3769-3031-41ae-bb08-a2f696_D2
Normal
1.0
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
1.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
1.0
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.9
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.8
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.8
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.8
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.8
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.8
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.7
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.7
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.7
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.7
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.7
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.7
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.6
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.6
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.6
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.6
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.5
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.5
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.5
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.5
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.4
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.4
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.4
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.3
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.3
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.3
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.3
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.2
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.2
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.2
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.2
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.1
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.1
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.0
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.0
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.0
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.0
15524912-685a-47ce-a824-567848_D2
Tumor
-0.1
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.1
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.2
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.3
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.3
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.3
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.3
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.3
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.3
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.4
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.4
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.5
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.5
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.5
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.5
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.6
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.6
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.7
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.7
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.7
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.8
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.8
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.8
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.9
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.9
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.9
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.9
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.9
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.9
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.0
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-1.0
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.0
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-1.0
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-1.1
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-1.1
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-1.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.1
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-1.2
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-1.2
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.2
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-1.4
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.5
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OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.