Expression of ATP5ME in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

ATP5ME is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 514.03

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

781.1

Number of samples

362

Samples

Sample	Description	TPM
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	3187.6
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	2702.1
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	2410.0
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	2346.2
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	2317.6
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	2273.7
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	2225.7
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	2045.1
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	1941.2
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	1817.6
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	1788.5
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	1758.0
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	1727.0
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	1694.0
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	1614.3
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	1558.8
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	1551.1
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	1547.7
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	1545.2
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	1518.6
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	1413.9
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	1411.0
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	1395.4
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	1383.1
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1336.1
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	1320.5
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	1301.9
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	1299.5
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	1293.9
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	1286.1
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	1270.5
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	1265.4
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	1239.8
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	1236.3
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	1217.5
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	1215.8
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	1198.7
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	1196.7
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	1193.5
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	1189.1
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	1166.7
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	1156.1
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	1153.0
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	1144.5
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	1130.3
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	1113.7
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	1105.4
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	1104.6
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	1102.1
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	1100.9
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	1094.7
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	1083.7
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	1070.6
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	1067.5
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	1065.1
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	1062.8
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	1062.8
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	1061.4
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	1058.8
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	1054.7
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	1050.6
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	1042.8
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	1041.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	1037.7
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	1019.7
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	1018.5
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	1016.8
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	1013.1
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	1001.7
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	1001.3
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	996.8
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	977.6
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	974.8
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	970.4
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	968.4
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	968.0
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	965.4
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	963.4
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	963.3
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	959.3
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	959.1
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	952.5
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	943.7
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	940.4
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	936.3
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	932.0
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	931.7
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	928.1
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	927.5
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	926.3
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	921.4
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	920.1
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	916.4
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	915.6
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	913.5
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	909.3
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	900.5
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	895.1
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	889.1
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	886.9
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	881.5
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	873.6
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	866.7
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	865.2
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	865.0
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	864.0
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	863.7
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	861.5
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	860.5
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	858.5
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	857.5
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	855.8
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	854.8
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	850.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	848.9
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	838.9
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	836.1
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	833.4
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	822.7
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	822.5
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	818.0
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	815.3
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	815.2
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	812.0
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	809.4
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	806.1
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	801.9
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	801.0
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	795.7
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	795.2
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	792.6
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	792.1
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	787.5
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	781.1
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	780.6
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	773.5
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	772.5
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	772.5
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	772.0
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	771.3
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	771.2
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	766.6
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	762.9
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	758.0
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	753.9
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	750.4
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	748.0
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	746.4
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	745.6
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	744.9
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	744.9
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	743.1
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	742.7
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	742.4
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	740.5
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	739.2
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	736.0
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	735.4
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	734.2
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	733.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	733.5
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	730.1
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	728.4
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	719.8
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	718.9
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	718.1
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	717.5
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	717.3
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	713.8
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	713.6
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	710.5
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	710.4
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	701.4
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	691.9
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	691.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	691.1
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	689.9
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	687.8
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	685.4
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	683.6
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	682.3
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	680.8
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	680.7
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	680.2
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	674.2
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	673.1
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	671.9
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	670.8
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	669.1
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	664.0
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	661.1
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	660.1
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	659.8
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	659.4
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	656.8
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	656.7
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	656.4
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	655.7
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	654.9
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	651.9
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	649.3
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	644.7
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	642.4
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	636.7
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	635.4
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	634.9
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	633.9
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	633.3
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	632.1
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	631.8
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	626.4
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	625.5
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	623.6
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	623.1
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	619.0
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	618.8
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	618.2
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	616.0
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	616.0
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	613.7
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	612.3
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	610.2
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	609.9
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	609.5
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	606.8
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	602.0
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	599.8
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	599.4
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	599.0
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	598.3
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	598.2
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	597.4
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	597.3
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	597.3
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	591.7
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	590.8
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	590.0
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	589.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	585.4
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	585.4
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	574.9
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	573.5
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	572.5
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	568.1
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	567.6
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	567.5
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	567.3
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	565.2
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	562.3
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	560.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	556.4
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	555.1
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	555.0
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	554.6
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	553.0
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	551.1
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	550.5
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	548.7
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	548.2
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	546.1
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	545.6
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	544.5
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	543.7
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	542.4
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	542.0
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	541.8
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	539.7
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	538.2
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	537.0
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	536.8
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	536.7
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	535.7
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	535.7
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	535.5
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	533.2
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	529.0
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	525.9
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	525.6
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	525.3
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	523.0
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	521.0
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	517.2
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	515.5
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	515.1
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	512.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	505.5
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	505.0
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	501.5
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	501.2
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	501.0
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	500.6
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	500.3
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	499.9
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	494.3
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	488.3
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	488.1
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	487.6
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	486.5
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	484.7
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	483.7
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	481.8
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	481.6
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	481.1
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	480.2
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	476.7
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	473.1
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	468.9
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	467.6
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	467.1
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	466.5
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	462.2
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	459.6
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	458.9
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	457.8
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	455.3
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	454.1
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	452.9
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	452.2
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	450.9
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	446.7
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	446.6
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	445.6
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	444.6
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	442.1
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	436.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	434.5
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	432.7
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	430.8
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	426.2
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	425.5
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	421.9
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	417.5
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	411.6
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	409.5
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	409.0
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	406.1
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	405.2
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	404.8
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	403.2
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	400.3
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	389.3
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	389.2
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	389.1
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	388.8
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	383.7
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	383.3
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	383.3
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	379.8
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	370.0
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	369.0
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	359.4
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	358.0
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	354.7
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	352.5
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	340.2
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	336.6
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	293.0
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	291.5
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	289.6
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	288.5
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	273.4
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	234.6
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
627	Tumor	1.4
513	Tumor	1.0
1043	Tumor	0.9
1025	Tumor	0.9
922	Normal	0.8
448	Normal	0.8
1045	Tumor	0.8
882	Normal	0.7
824	Normal	0.7
756	Normal	0.7
745	Tumor	0.7
912	Normal	0.7
515	Tumor	0.7
571	Tumor	0.7
227	Tumor	0.7
818	Normal	0.7
534	Normal	0.7
1032	Normal	0.7
1014	Normal	0.6
1046	Normal	0.6
982	Normal	0.6
823	Tumor	0.6
361	Tumor	0.6
714	Normal	0.6
868	Normal	0.6
487	Tumor	0.6
723	Tumor	0.6
862	Normal	0.6
472	Normal	0.6
488	Normal	0.6
785	Tumor	0.6
564	Normal	0.6
944	Normal	0.6
938	Normal	0.6
722	Normal	0.6
695	Tumor	0.6
1022	Normal	0.6
864	Normal	0.6
464	Normal	0.6
858	Normal	0.5
958	Normal	0.5
746	Normal	0.5
356	Normal	0.5
1042	Normal	0.5
738	Normal	0.5
852	Normal	0.5
918	Normal	0.5
924	Normal	0.5
456	Normal	0.5
786	Normal	0.5
698	Normal	0.5
484	Normal	0.5
546	Normal	0.5
1044	Normal	0.5
514	Normal	0.5
328	Normal	0.5
452	Normal	0.5
1013	Tumor	0.5
462	Normal	0.5
713	Tumor	0.5
925	Tumor	0.5
568	Normal	0.5
926	Normal	0.5
1026	Normal	0.5
964	Normal	0.5
984	Normal	0.5
128	Normal	0.5
436	Normal	0.5
416	Normal	0.5
162	Normal	0.5
412	Normal	0.5
528	Normal	0.5
365	Tumor	0.5
394	Normal	0.5
742	Normal	0.5
228	Normal	0.5
981	Tumor	0.5
923	Tumor	0.4
232	Normal	0.4
616	Normal	0.4
978	Normal	0.4
636	Normal	0.4
364	Normal	0.4
878	Normal	0.4
426	Normal	0.4
728	Normal	0.4
388	Normal	0.4
954	Normal	0.4
494	Normal	0.4
648	Normal	0.4
915	Tumor	0.4
1041	Tumor	0.4
466	Normal	0.4
136	Normal	0.4
696	Normal	0.4
1027	Tumor	0.4
423	Tumor	0.4
716	Normal	0.4
414	Normal	0.4
518	Normal	0.4
615	Tumor	0.4
618	Normal	0.4
428	Normal	0.4
344	Normal	0.4
867	Tumor	0.4
474	Normal	0.4
424	Normal	0.4
816	Normal	0.4
866	Normal	0.4
446	Normal	0.4
755	Tumor	0.4
916	Normal	0.4
952	Normal	0.4
572	Normal	0.3
686	Normal	0.3
914	Normal	0.3
465	Tumor	0.3
258	Normal	0.3
483	Tumor	0.3
517	Tumor	0.3
1016	Normal	0.3
286	Normal	0.3
863	Tumor	0.3
628	Normal	0.3
376	Normal	0.3
874	Normal	0.3
526	Normal	0.3
314	Normal	0.3
284	Normal	0.3
741	Tumor	0.3
358	Normal	0.3
956	Normal	0.3
142	Normal	0.3
196	Normal	0.3
482	Normal	0.3
298	Normal	0.3
967	Tumor	0.3
172	Normal	0.3
222	Normal	0.3
432	Normal	0.3
278	Normal	0.3
976	Normal	0.3
966	Normal	0.3
873	Tumor	0.3
422	Normal	0.3
727	Tumor	0.3
148	Normal	0.3
114	Normal	0.3
363	Tumor	0.2
1028	Normal	0.2
362	Normal	0.2
392	Normal	0.2
132	Normal	0.2
558	Normal	0.2
955	Tumor	0.2
664	Normal	0.2
1031	Tumor	0.2
524	Normal	0.2
354	Normal	0.2
537	Tumor	0.2
214	Normal	0.2
968	Normal	0.2
884	Normal	0.2
342	Normal	0.2
468	Normal	0.2
411	Tumor	0.2
666	Normal	0.2
111	Normal	0.2
523	Tumor	0.2
393	Tumor	0.2
778	Normal	0.2
352	Normal	0.2
396	Normal	0.2
386	Normal	0.2
366	Normal	0.2
224	Normal	0.2
212	Normal	0.2
332	Normal	0.2
138	Normal	0.1
327	Tumor	0.1
257	Tumor	0.1
574	Normal	0.1
415	Tumor	0.1
525	Tumor	0.1
536	Normal	0.1
538	Normal	0.1
272	Normal	0.1
145	Tumor	0.1
697	Tumor	0.1
516	Normal	0.1
491	Tumor	0.1
186	Normal	0.1
744	Normal	0.1
662	Normal	0.1
953	Tumor	0.1
461	Tumor	0.1
368	Normal	0.1
353	Tumor	0.1
911	Tumor	0.1
777	Tumor	0.1
218	Normal	0.1
642	Normal	0.1
312	Normal	0.1
554	Normal	0.1
477	Tumor	0.1
672	Normal	0.1
857	Tumor	0.1
481	Tumor	0.1
451	Tumor	0.1
635	Tumor	0.1
492	Normal	0.1
478	Normal	0.0
188	Normal	0.0
262	Normal	0.0
527	Tumor	0.0
146	Normal	0.0
498	Normal	0.0
921	Tumor	0.0
721	Tumor	0.0
815	Tumor	0.0
557	Tumor	-0.1
434	Normal	-0.1
443	Tumor	-0.1
563	Tumor	-0.1
957	Tumor	-0.1
427	Tumor	-0.1
261	Tumor	-0.1
137	Tumor	-0.1
951	Tumor	-0.1
113	Tumor	-0.1
126	Normal	-0.1
268	Normal	-0.1
267	Tumor	-0.1
341	Tumor	-0.1
861	Tumor	-0.1
937	Tumor	-0.1
425	Tumor	-0.1
553	Tumor	-0.1
737	Tumor	-0.1
715	Tumor	-0.1
221	Tumor	-0.2
473	Tumor	-0.2
851	Tumor	-0.2
685	Tumor	-0.2
384	Normal	-0.2
1021	Tumor	-0.2
231	Tumor	-0.2
433	Tumor	-0.2
617	Tumor	-0.2
124	Normal	-0.2
171	Tumor	-0.2
567	Tumor	-0.2
444	Normal	-0.2
431	Tumor	-0.2
387	Tumor	-0.2
355	Tumor	-0.3
493	Tumor	-0.3
1015	Tumor	-0.3
191	Tumor	-0.3
192	Normal	-0.3
533	Tumor	-0.3
391	Tumor	-0.3
187	Tumor	-0.3
161	Tumor	-0.3
447	Tumor	-0.3
663	Tumor	-0.3
977	Tumor	-0.3
883	Tumor	-0.3
983	Tumor	-0.3
195	Tumor	-0.3
421	Tumor	-0.3
641	Tumor	-0.4
297	Tumor	-0.4
357	Tumor	-0.4
217	Tumor	-0.4
743	Tumor	-0.4
455	Tumor	-0.4
814	Normal	-0.4
963	Tumor	-0.4
913	Tumor	-0.4
112	Tumor	-0.4
127	Tumor	-0.4
223	Tumor	-0.4
135	Tumor	-0.4
313	Tumor	-0.4
271	Tumor	-0.4
535	Tumor	-0.4
813	Tumor	-0.4
647	Tumor	-0.5
471	Tumor	-0.5
285	Tumor	-0.5
351	Tumor	-0.5
435	Tumor	-0.5
141	Tumor	-0.5
917	Tumor	-0.5
497	Tumor	-0.5
213	Tumor	-0.5
975	Tumor	-0.5
573	Tumor	-0.5
125	Tumor	-0.5
665	Tumor	-0.6
943	Tumor	-0.6
463	Tumor	-0.6
881	Tumor	-0.6
865	Tumor	-0.6
147	Tumor	-0.6
185	Tumor	-0.6
817	Tumor	-0.6
413	Tumor	-0.6
445	Tumor	-0.6
383	Tumor	-0.7
211	Tumor	-0.7
385	Tumor	-0.7
467	Tumor	-0.7
724	Normal	-0.7
375	Tumor	-0.7
367	Tumor	-0.7
877	Tumor	-0.8
395	Tumor	-0.8
131	Tumor	-0.8
965	Tumor	-0.8
671	Tumor	-0.8
331	Tumor	-0.8
277	Tumor	-0.8
311	Tumor	-1.0
123	Tumor	-1.0
343	Tumor	-1.0
661	Tumor	-1.0
283	Tumor	-1.1
545	Tumor	-1.1
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA035010
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS