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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5ME is not prognostic in Lung Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
496.7
Number of samples
497
Samples
Sample
Description
TPM
TCGA-55-A492-01A
0 years, female, white, stage:Stage IA, alive, 596 days
1757.6
TCGA-78-7220-01A
0 years, female, white, stage:Stage IIIA, dead, 807 days
1673.4
TCGA-50-6597-01A
0 years, female, white, stage:Stage IB, dead, 1268 days
1573.4
TCGA-49-AARQ-01A
0 years, female, black or african american, stage:Stage I, alive, 6732 days
1498.9
TCGA-64-5778-01A
0 years, male, white, stage:Stage IB, alive, 1305 days
1441.7
TCGA-73-A9RS-01A
0 years, male, black or african american, stage:Stage IIB, dead, 340 days
1259.4
TCGA-38-4628-01A
0 years, female, white, stage:Stage IIB, dead, 1492 days
1211.6
TCGA-49-4507-01A
0 years, female, white, stage:Stage IIIA, dead, 268 days
1192.7
TCGA-75-7027-01A
male, stage:Stage IB, alive, 3059 days
1172.2
TCGA-55-8094-01A
0 years, male, white, stage:Stage IV, alive, 541 days
1129.1
TCGA-50-5931-01A
0 years, female, white, stage:Stage IB, dead, 434 days
1127.0
TCGA-69-7980-01A
0 years, female, white, stage:Stage I, alive, 411 days
1087.4
TCGA-49-4514-01A
0 years, female, white, stage:Stage IA, alive, 1700 days
1083.1
TCGA-75-5146-01A
male, stage:Stage IB, alive, 2368 days
1074.4
TCGA-05-5423-01A
0 years, male, stage:Stage IIB, alive, 151 days
1066.0
TCGA-73-7499-01A
0 years, female, white, stage:Stage IB, dead, 1531 days
1059.0
TCGA-50-6594-01A
0 years, female, black or african american, stage:Stage IIIA, dead, 370 days
1037.1
TCGA-62-A471-01A
0 years, male, white, stage:Stage IIB, alive, 1246 days
1024.6
TCGA-64-1676-01A
0 years, male, white, stage:Stage IA, alive, 1728 days
1018.4
TCGA-49-4490-01A
0 years, female, white, stage:Stage IIIA, dead, 385 days
999.3
TCGA-50-5044-01A
0 years, female, white, stage:Stage IIIB, dead, 624 days
975.0
TCGA-38-4631-01A
0 years, female, white, stage:Stage IB, dead, 354 days
972.3
TCGA-MN-A4N1-01A
0 years, male, black or african american, stage:Stage IIA, alive, 827 days
972.0
TCGA-64-5781-01A
0 years, female, white, stage:Stage IB, alive, 1559 days
954.6
TCGA-50-5068-01A
0 years, female, white, stage:Stage IIB, dead, 1499 days
929.2
TCGA-78-7149-01A
0 years, male, white, stage:Stage IIIB, alive, 3940 days
924.9
TCGA-86-8279-01A
0 years, male, white, stage:Stage IIA, alive, 949 days
917.0
TCGA-55-1594-01A
0 years, male, white, stage:Stage IIIA, alive, 1178 days
913.9
TCGA-55-8302-01A
0 years, male, white, stage:Stage IB, alive, 478 days
901.5
TCGA-67-3770-01A
0 years, female, white, stage:Stage IA, alive, 610 days
899.0
TCGA-62-A46P-01A
0 years, male, white, stage:Stage IB, dead, 594 days
897.7
TCGA-86-7955-01A
0 years, male, white, stage:Stage IB, alive, 1072 days
885.3
TCGA-49-AAR9-01A
0 years, male, black or african american, stage:Stage IIB, dead, 260 days
875.5
TCGA-64-1678-01A
0 years, female, white, stage:'--, alive, 1189 days
864.3
TCGA-44-7659-01A
0 years, male, white, stage:Stage IA, alive, 691 days
839.8
TCGA-05-5428-01A
0 years, male, stage:Stage IIA, alive, 670 days
838.5
TCGA-44-8120-01A
0 years, male, black or african american, stage:Stage IB, alive, 260 days
837.3
TCGA-78-7539-01A
0 years, female, white, stage:Stage IIA, alive, 791 days
831.8
TCGA-38-4629-01A
0 years, male, white, stage:Stage IIB, dead, 864 days
831.4
TCGA-64-1681-01A
0 years, female, white, stage:Stage IA, dead, 1167 days
831.4
TCGA-97-8175-01A
0 years, female, white, stage:Stage IB, alive, 551 days
830.4
TCGA-49-4486-01A
0 years, male, white, stage:Stage IA, dead, 2318 days
819.2
TCGA-69-8253-01A
0 years, female, black or african american, stage:Stage IIA, alive, 426 days
817.1
TCGA-97-8177-01A
0 years, female, white, stage:Stage IB, alive, 499 days
812.2
TCGA-44-5643-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 1013 days
796.5
TCGA-80-5611-01A
male, stage:Stage IB, alive, 2595 days
792.3
TCGA-49-4494-01A
0 years, male, white, stage:Stage IIIA, dead, 1081 days
788.4
TCGA-05-5715-01A
0 years, female, stage:Stage IB, alive, 62 days
782.8
TCGA-95-7948-01A
0 years, female, white, stage:Stage IB, alive, 476 days
778.8
TCGA-78-7163-01A
0 years, male, white, stage:Stage IB, alive, 7248 days
777.3
TCGA-62-A46O-01A
0 years, female, white, stage:Stage IB, dead, 1454 days
772.3
TCGA-78-7155-01A
0 years, male, white, stage:Stage IB, dead, 1171 days
764.4
TCGA-78-7154-01A
0 years, male, white, stage:Stage IIIA, dead, 593 days
749.9
TCGA-91-8499-01A
0 years, female, white, stage:Stage IA, alive, 36 days
749.3
TCGA-75-5147-01A
female, stage:Stage IB, alive, 1333 days
748.3
TCGA-78-7166-01A
0 years, male, white, stage:Stage IIB, dead, 258 days
746.6
TCGA-78-7542-01A
0 years, male, white, stage:Stage IB, dead, 321 days
746.0
TCGA-95-A4VP-01A
0 years, female, white, stage:Stage IIIA, alive, 605 days
743.3
TCGA-78-7147-01A
0 years, female, white, stage:Stage IIB, dead, 586 days
735.7
TCGA-78-7535-01A
0 years, male, white, stage:Stage IB, dead, 949 days
734.7
TCGA-91-6836-01A
0 years, female, white, stage:Stage IB, alive, 417 days
729.8
TCGA-55-7570-01A
0 years, male, black or african american, stage:Stage IA, alive, 824 days
727.9
TCGA-NJ-A4YF-01A
0 years, female, black or african american, stage:Stage IA, alive, 2161 days
722.5
TCGA-55-7281-01A
0 years, female, white, stage:Stage IA, alive, 872 days
716.4
TCGA-62-8402-01A
0 years, female, white, stage:Stage IIIA, dead, 1498 days
715.4
TCGA-50-6591-01A
0 years, female, white, stage:Stage IV, dead, 119 days
706.1
TCGA-MP-A4TE-01A
0 years, male, white, stage:Stage IIA, dead, 896 days
704.7
TCGA-L9-A443-01A
0 years, female, white, stage:Stage IA, dead, 193 days
688.9
TCGA-53-7624-01A
0 years, female, white, stage:Stage IV, dead, 1043 days
686.8
TCGA-49-AAQV-01A
0 years, female, black or african american, stage:Stage II, dead, 677 days
682.2
TCGA-50-5936-01A
0 years, male, white, stage:Stage IIIA, dead, 257 days
680.3
TCGA-05-5429-01A
0 years, male, stage:Stage IIIA, dead, 275 days
678.3
TCGA-95-8494-01A
0 years, male, white, stage:Stage IIA, alive, 84 days
676.0
TCGA-49-4488-01A
0 years, female, white, stage:Stage IA, dead, 869 days
675.6
TCGA-97-8179-01A
0 years, male, white, stage:Stage IA, alive, 435 days
674.2
TCGA-49-AARN-01A
0 years, female, black or african american, stage:Stage IA, dead, 1135 days
674.0
TCGA-80-5608-01A
female, stage:Stage IA, alive, 2832 days
666.5
TCGA-95-8039-01A
0 years, male, white, stage:Stage IA, alive, 830 days
660.4
TCGA-91-6847-01A
0 years, female, white, stage:Stage IB, alive, 842 days
658.0
TCGA-86-8673-01A
0 years, male, white, stage:Stage IB, alive, 862 days
656.4
TCGA-50-5045-01A
0 years, female, black or african american, stage:'--, dead, 2174 days
656.1
TCGA-86-8054-01A
0 years, male, white, stage:Stage IIB, alive, 1148 days
652.4
TCGA-99-8032-01A
0 years, male, white, stage:Stage IA, alive, 44 days
643.0
TCGA-49-AAR0-01A
0 years, male, black or african american, stage:Stage IA, alive, 4765 days
642.3
TCGA-91-A4BD-01A
0 years, male, white, stage:Stage IIA, alive, 603 days
639.1
TCGA-38-6178-01A
0 years, female, white, stage:Stage IIIA, alive, 448 days
636.1
TCGA-J2-A4AG-01A
0 years, female, white, stage:Stage IA, alive, 988 days
636.1
TCGA-78-7150-01A
0 years, male, white, stage:Stage IIB, dead, 666 days
635.3
TCGA-69-8255-01A
0 years, male, white, stage:Stage IA, alive, 129 days
628.5
TCGA-78-7145-01A
0 years, female, white, stage:Stage IV, dead, 826 days
628.0
TCGA-44-2655-01A
0 years, female, white, stage:Stage IA, alive, 1324 days
627.8
TCGA-67-3772-01A
0 years, female, white, stage:Stage IB, alive, 573 days
624.7
TCGA-55-1596-01A
0 years, male, asian, stage:Stage IIB, alive, 2065 days
623.5
TCGA-44-7669-01A
0 years, male, black or african american, stage:Stage IIA, dead, 574 days
621.2
TCGA-55-8091-01A
0 years, male, white, stage:Stage IB, alive, 600 days
620.5
TCGA-75-5125-01A
male, stage:Stage IIB, dead, 2027 days
619.7
TCGA-49-4512-01A
0 years, female, white, stage:Stage IIIA, dead, 905 days
618.2
TCGA-50-5055-01A
0 years, female, white, stage:Stage IIA, dead, 1830 days
617.0
TCGA-95-7947-01A
0 years, male, white, stage:Stage IA, alive, 477 days
611.3
TCGA-86-A456-01A
0 years, female, asian, stage:Stage IA, alive, 896 days
610.6
TCGA-J2-A4AD-01A
0 years, female, white, stage:Stage IA, dead, 550 days
608.0
TCGA-91-6829-01A
0 years, male, white, stage:Stage IB, dead, 1258 days
607.9
TCGA-97-8171-01A
0 years, male, asian, stage:Stage IV, alive, 568 days
607.2
TCGA-86-7953-01A
0 years, female, white, stage:Stage IA, alive, 997 days
604.4
TCGA-55-6972-01A
0 years, male, white, stage:Stage IB, dead, 1632 days
603.1
TCGA-93-8067-01A
0 years, male, asian, stage:Stage IB, alive, 186 days
600.9
TCGA-38-4632-01A
0 years, male, black or african american, stage:Stage IV, dead, 1357 days
600.7
TCGA-50-5935-01A
0 years, female, white, stage:Stage IA, dead, 653 days
600.0
TCGA-53-7813-01A
0 years, female, white, stage:Stage IIIB, alive, 424 days
599.7
TCGA-44-3398-01A
0 years, female, white, stage:Stage IA, alive, 1163 days
599.5
TCGA-62-8397-01A
0 years, female, white, stage:Stage IIB, alive, 1289 days
598.8
TCGA-49-AARO-01A
0 years, female, black or african american, stage:Stage IA, alive, 3759 days
598.6
TCGA-64-1677-01A
0 years, female, white, stage:Stage IIIA, dead, 628 days
594.9
TCGA-64-1680-01A
0 years, male, white, stage:Stage IV, alive, 1126 days
593.4
TCGA-55-8299-01A
0 years, female, white, stage:Stage IA, dead, 469 days
593.2
TCGA-97-7941-01A
0 years, female, white, stage:Stage IA, alive, 484 days
588.5
TCGA-MP-A4T7-01A
0 years, female, stage:Stage IV, dead, 167 days
588.3
TCGA-05-4250-01A
0 years, female, stage:Stage IIIA, dead, 121 days
586.3
TCGA-NJ-A7XG-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 617 days
586.1
TCGA-05-4396-01A
0 years, male, stage:Stage IIIB, dead, 303 days
583.9
TCGA-86-8073-01A
0 years, male, white, stage:Stage IB, alive, 740 days
581.9
TCGA-05-4390-01A
0 years, female, stage:Stage IB, alive, 1126 days
580.2
TCGA-75-6212-01A
female, stage:Stage IIB, dead, 1516 days
579.4
TCGA-69-7979-01A
0 years, female, white, stage:Stage IB, alive, 408 days
571.7
TCGA-55-7911-01A
0 years, female, white, stage:Stage IA, alive, 537 days
570.3
TCGA-44-2662-01A
0 years, male, white, stage:Stage IB, alive, 1280 days
569.4
TCGA-44-4112-01A
0 years, female, white, stage:Stage IB, dead, 808 days
568.4
TCGA-05-4389-01A
0 years, male, stage:Stage IA, alive, 1369 days
568.2
TCGA-62-A46Y-01A
0 years, female, white, stage:Stage IIIA, dead, 414 days
565.4
TCGA-78-7148-01A
0 years, male, white, stage:Stage IIB, dead, 626 days
564.1
TCGA-MP-A4TF-01A
0 years, female, white, stage:Stage IIA, dead, 336 days
564.0
TCGA-50-6595-01A
0 years, female, white, stage:Stage IIIA, dead, 189 days
563.6
TCGA-91-6831-01A
0 years, male, white, stage:Stage IB, alive, 310 days
563.3
TCGA-67-3773-01A
0 years, female, white, stage:Stage IB, alive, 427 days
562.0
TCGA-62-8398-01A
0 years, male, white, stage:Stage IIIA, dead, 444 days
560.7
TCGA-MP-A4T6-01A
0 years, female, white, stage:Stage IIIA, dead, 1790 days
560.0
TCGA-L9-A5IP-01A
0 years, female, black or african american, stage:Stage IV, dead, 58 days
559.7
TCGA-L9-A8F4-01A
0 years, female, black or african american, stage:Stage IB, alive, 476 days
558.5
TCGA-71-8520-01A
0 years, female, asian, stage:Stage IB, dead, 210 days
558.2
TCGA-62-8395-01A
0 years, female, white, stage:Stage IIB, alive, 1216 days
558.1
TCGA-44-6776-01A
0 years, female, white, stage:Stage IA, alive, 2616 days
557.4
TCGA-78-7156-01A
0 years, male, white, stage:Stage IV, dead, 976 days
556.7
TCGA-86-A4D0-01A
0 years, male, white, stage:Stage IIA, dead, 116 days
553.8
TCGA-55-7907-01A
0 years, male, white, stage:Stage IIA, dead, 343 days
553.7
TCGA-55-6975-01A
0 years, male, white, stage:Stage IIB, dead, 118 days
552.9
TCGA-86-8672-01A
0 years, male, white, stage:Stage IIB, dead, 19 days
545.5
TCGA-05-4430-01A
0 years, female, stage:Stage IB, alive, 761 days
544.5
TCGA-50-5072-01A
0 years, male, white, stage:Stage IIIA, dead, 250 days
543.5
TCGA-L9-A50W-01A
0 years, male, black or african american, stage:Stage IIA, dead, 442 days
541.6
TCGA-55-8506-01A
0 years, female, white, stage:Stage IIB, alive, 11 days
541.6
TCGA-50-6590-01A
0 years, female, white, stage:Stage IB, dead, 1288 days
538.0
TCGA-86-8674-01A
0 years, male, white, stage:Stage IIA, alive, 806 days
537.0
TCGA-05-5425-01A
0 years, male, stage:Stage IIB, alive, 882 days
535.5
TCGA-49-4501-01A
0 years, female, white, stage:Stage IB, dead, 1421 days
535.1
TCGA-44-7660-01A
0 years, male, white, stage:Stage IB, alive, 592 days
533.6
TCGA-75-6214-01A
female, stage:Stage IIIA, dead, 1115 days
533.0
TCGA-86-8056-01A
0 years, female, white, stage:Stage IIIA, alive, 139 days
532.4
TCGA-49-6742-01A
0 years, male, white, stage:Stage IIA, dead, 488 days
532.2
TCGA-NJ-A4YP-01A
0 years, male, white, stage:Stage IB, alive, 50 days
528.3
TCGA-35-4123-01A
0 years, male, white, stage:Stage IA, alive, 182 days
526.3
TCGA-78-8655-01A
0 years, female, stage:Stage IA, alive, 2360 days
523.5
TCGA-44-2666-01A
0 years, male, white, stage:Stage IB, dead, 97 days
520.8
TCGA-49-4510-01A
0 years, female, black or african american, stage:Stage IIB, dead, 896 days
519.3
TCGA-62-A46R-01A
0 years, female, white, stage:Stage IB, dead, 1725 days
518.9
TCGA-55-7573-01A
0 years, female, white, stage:Stage IA, alive, 487 days
517.3
TCGA-05-4434-01A
0 years, female, stage:Stage IV, dead, 457 days
515.6
TCGA-55-A57B-01A
0 years, female, black or african american, stage:Stage IA, alive, 546 days
513.4
TCGA-05-4418-01A
0 years, male, stage:Stage IIIA, dead, 274 days
513.3
TCGA-55-7283-01A
0 years, female, white, stage:Stage IIIA, alive, 609 days
510.7
TCGA-44-2665-01A
0 years, female, white, stage:Stage IIB, alive, 1301 days
509.5
TCGA-69-8453-01A
0 years, male, white, stage:Stage IIB, alive, 813 days
508.4
TCGA-97-8552-01A
0 years, female, white, stage:Stage I, alive, 626 days
507.0
TCGA-86-8280-01A
0 years, female, white, stage:Stage IIA, alive, 701 days
505.3
TCGA-55-8097-01A
0 years, female, white, stage:Stage IA, alive, 476 days
504.9
TCGA-86-8278-01A
0 years, female, white, stage:Stage IIB, alive, 944 days
504.4
TCGA-83-5908-01A
0 years, female, white, stage:Stage IA, alive, 824 days
503.9
TCGA-95-7562-01A
0 years, male, black or african american, stage:Stage IIA, dead, 87 days
503.5
TCGA-50-5066-01A
0 years, male, black or african american, stage:Stage IB, alive, 1442 days
499.7
TCGA-44-7670-01A
0 years, female, white, stage:Stage IIA, alive, 882 days
499.6
TCGA-78-7153-01A
0 years, female, white, stage:Stage IB, alive, 3635 days
498.8
TCGA-67-6216-01A
0 years, female, white, stage:Stage IA, alive, 141 days
497.1
TCGA-95-A4VK-01A
0 years, female, white, stage:Stage IIIA, alive, 651 days
495.3
TCGA-91-6849-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 35 days
494.9
TCGA-38-A44F-01A
0 years, male, white, stage:Stage IB, alive, 133 days
491.0
TCGA-55-6982-01A
0 years, female, white, stage:Stage IIB, dead, 995 days
490.8
TCGA-69-7764-01A
0 years, male, white, stage:Stage IA, alive, 414 days
490.8
TCGA-62-A46S-01A
0 years, male, white, stage:Stage IB, dead, 1653 days
489.0
TCGA-93-7348-01A
0 years, female, white, stage:Stage IA, alive, 531 days
488.5
TCGA-55-8087-01A
0 years, female, white, stage:Stage IB, alive, 462 days
487.5
TCGA-55-8085-01A
0 years, male, white, stage:Stage IA, alive, 904 days
485.9
TCGA-55-8089-01A
0 years, male, white, stage:Stage IA, dead, 702 days
485.7
TCGA-44-5644-01A
0 years, female, white, stage:Stage IB, alive, 863 days
485.0
TCGA-55-6980-01A
0 years, male, white, stage:Stage IA, alive, 2109 days
484.3
TCGA-73-4675-01A
0 years, male, white, stage:Stage IIIA, dead, 922 days
483.9
TCGA-35-5375-01A
0 years, male, white, stage:Stage IIIA, alive, 264 days
483.2
TCGA-55-6983-01A
0 years, male, white, stage:Stage IIB, alive, 2823 days
483.2
TCGA-55-1592-01A
0 years, male, white, stage:Stage IA, dead, 701 days
481.8
TCGA-86-7711-01A
0 years, male, white, stage:Stage IIA, dead, 1046 days
481.8
TCGA-55-6984-01A
0 years, female, white, stage:Stage IIB, dead, 760 days
481.8
TCGA-05-4403-01A
0 years, male, stage:Stage IB, alive, 578 days
480.6
TCGA-62-A470-01A
0 years, male, white, stage:Stage IB, dead, 1194 days
479.4
TCGA-97-A4M3-01A
0 years, female, white, stage:Stage IA, alive, 540 days
478.4
TCGA-44-3917-01A
0 years, female, white, stage:Stage IB, alive, 1183 days
478.4
TCGA-86-7954-01A
0 years, female, white, stage:Stage IB, alive, 605 days
476.3
TCGA-86-6562-01A
0 years, male, white, stage:Stage IIA, dead, 376 days
475.9
TCGA-50-5944-01A
0 years, female, white, stage:Stage IA, alive, 1750 days
475.2
TCGA-49-6767-01A
0 years, female, white, stage:Stage IIB, alive, 677 days
475.0
TCGA-55-7728-01A
0 years, female, white, stage:Stage IB, alive, 704 days
474.1
TCGA-55-5899-01A
0 years, male, white, stage:'--, alive, 930 days
473.5
TCGA-MN-A4N5-01A
0 years, male, white, stage:Stage IA, alive, 84 days
473.0
TCGA-44-5645-01A
0 years, female, black or african american, stage:Stage IA, alive, 852 days
472.5
TCGA-78-7537-01A
0 years, male, stage:Stage IB, dead, 1622 days
472.3
TCGA-35-4122-01A
0 years, male, white, stage:Stage IA, alive, 225 days
471.4
TCGA-50-6592-01A
0 years, female, white, stage:Stage IB, dead, 777 days
467.7
TCGA-MP-A4SW-01A
0 years, male, white, stage:Stage IIB, dead, 1778 days
467.1
TCGA-05-4432-01A
0 years, male, stage:Stage IIB, alive, 761 days
466.6
TCGA-55-6981-01A
0 years, female, white, stage:Stage IIIA, dead, 1379 days
466.4
TCGA-69-8254-01A
0 years, male, white, stage:'--, alive, 409 days
466.1
TCGA-49-4505-01A
0 years, female, white, stage:Stage IIB, dead, 428 days
465.5
TCGA-86-8358-01A
0 years, male, white, stage:Stage IB, alive, 653 days
465.0
TCGA-05-4415-01A
0 years, male, stage:Stage IIIB, dead, 91 days
464.9
TCGA-55-8301-01A
0 years, male, white, stage:Stage IB, alive, 534 days
464.7
TCGA-55-A494-01A
0 years, female, white, stage:Stage IB, alive, 481 days
464.7
TCGA-05-5420-01A
0 years, male, stage:Stage IIIA, alive, 457 days
464.2
TCGA-MP-A4TA-01A
0 years, female, white, stage:Stage IA, dead, 950 days
464.0
TCGA-NJ-A4YG-01A
0 years, male, white, stage:Stage IB, alive, 2261 days
463.4
TCGA-55-6986-01A
0 years, female, white, stage:Stage IB, alive, 3261 days
462.3
TCGA-86-A4JF-01A
0 years, male, white, stage:Stage IIB, dead, 737 days
460.6
TCGA-69-A59K-01A
0 years, female, black or african american, stage:Stage IIB, alive, 591 days
460.4
TCGA-44-7662-01A
0 years, male, white, stage:Stage IB, alive, 218 days
459.6
TCGA-05-4425-01A
0 years, female, stage:Stage IV, alive, 669 days
459.4
TCGA-93-7347-01A
0 years, female, white, stage:Stage IA, alive, 683 days
457.4
TCGA-49-AARR-01A
0 years, male, black or african american, stage:Stage IA, alive, 4992 days
456.5
TCGA-50-6593-01A
0 years, female, white, stage:Stage IIIA, dead, 336 days
456.3
TCGA-50-5932-01A
0 years, male, white, stage:Stage IIB, dead, 1235 days
456.2
TCGA-55-8620-01A
0 years, male, white, stage:Stage IV, dead, 375 days
455.5
TCGA-05-4384-01A
0 years, male, stage:Stage IIIA, alive, 426 days
453.7
TCGA-38-4627-01A
0 years, female, white, stage:Stage IIA, dead, 1147 days
453.7
TCGA-44-6148-01A
0 years, male, white, stage:Stage IA, alive, 704 days
453.6
TCGA-55-6978-01A
0 years, male, white, stage:Stage IIA, dead, 176 days
452.4
TCGA-49-AAR4-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 879 days
451.8
TCGA-55-7727-01A
0 years, male, white, stage:Stage IIIA, alive, 119 days
450.8
TCGA-05-4427-01A
0 years, female, stage:Stage IIB, alive, 791 days
449.7
TCGA-55-8207-01A
0 years, male, white, stage:Stage IB, alive, 977 days
449.1
TCGA-67-3774-01A
0 years, female, white, stage:Stage IB, alive, 385 days
447.5
TCGA-49-AAR3-01A
0 years, male, black or african american, stage:Stage IIB, alive, 1893 days
447.4
TCGA-38-4626-01A
0 years, female, white, stage:'--, alive, 3674 days
446.7
TCGA-NJ-A55R-01A
0 years, male, white, stage:Stage IA, alive, 603 days
445.6
TCGA-78-7540-01A
0 years, female, white, stage:Stage IB, dead, 1197 days
445.2
TCGA-05-4402-01A
0 years, female, stage:Stage IV, dead, 244 days
443.7
TCGA-73-4676-01A
0 years, male, white, stage:Stage IIA, dead, 281 days
443.6
TCGA-50-5946-01A
0 years, male, white, stage:Stage IA, alive, 1617 days
443.5
TCGA-MP-A4SY-01A
0 years, male, white, stage:Stage IIB, dead, 1501 days
443.1
TCGA-05-4433-01A
0 years, male, stage:Stage IB, alive, 730 days
442.5
TCGA-55-7903-01A
0 years, male, white, stage:Stage IA, alive, 567 days
440.6
TCGA-44-2661-01A
0 years, female, white, stage:Stage IA, alive, 1159 days
440.3
TCGA-73-4662-01A
0 years, female, white, stage:Stage IA, alive, 2515 days
439.4
TCGA-44-7667-01A
0 years, female, white, stage:Stage IIB, alive, 1097 days
438.6
TCGA-35-3615-01A
0 years, male, white, stage:Stage IB, alive, 14 days
438.5
TCGA-97-A4M6-01A
0 years, female, white, stage:Stage IA, alive, 568 days
437.3
TCGA-MP-A4T9-01A
0 years, female, white, stage:Stage IIIA, dead, 1265 days
436.7
TCGA-MP-A4T8-01A
0 years, male, stage:Stage IIIA, dead, 161 days
436.0
TCGA-67-6215-01A
0 years, female, white, stage:Stage IB, alive, 174 days
435.0
TCGA-50-5051-01A
0 years, female, white, stage:Stage IIIA, dead, 478 days
434.5
TCGA-MP-A4TI-01A
0 years, male, white, stage:Stage IIA, dead, 429 days
434.3
TCGA-75-6206-01A
male, stage:Stage IB, alive, 2590 days
430.2
TCGA-44-7661-01A
0 years, female, white, stage:Stage IB, dead, 557 days
429.2
TCGA-05-4422-01A
0 years, male, stage:Stage IB, alive, 365 days
429.2
TCGA-97-A4M5-01A
0 years, male, white, stage:Stage IA, alive, 634 days
427.7
TCGA-99-8025-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 1060 days
427.4
TCGA-62-8394-01A
0 years, female, white, stage:Stage IIIB, dead, 139 days
427.1
TCGA-50-8459-01A
0 years, male, white, stage:Stage IIB, alive, 1119 days
427.1
TCGA-78-7152-01A
0 years, male, white, stage:Stage IB, dead, 1215 days
425.7
TCGA-73-4658-01A
0 years, female, white, stage:Stage IB, dead, 1600 days
425.0
TCGA-78-7161-01A
0 years, female, white, stage:Stage IIB, dead, 291 days
422.0
TCGA-44-2656-01A
0 years, male, white, stage:Stage IB, alive, 1429 days
421.0
TCGA-55-8512-01A
0 years, male, white, stage:Stage IV, dead, 607 days
421.0
TCGA-05-4420-01A
0 years, male, stage:Stage IB, alive, 912 days
419.6
TCGA-91-6835-01A
0 years, female, white, stage:Stage IA, alive, 79 days
418.9
TCGA-97-7547-01A
0 years, female, white, stage:Stage IB, alive, 1965 days
418.8
TCGA-75-7025-01A
male, stage:Stage IB, alive, 3305 days
418.5
TCGA-L9-A743-01A
0 years, male, black or african american, stage:Stage IIA, alive, 664 days
418.1
TCGA-73-4670-01A
0 years, female, white, stage:Stage IV, alive, 131 days
415.8
TCGA-05-4424-01A
0 years, male, stage:Stage IIB, alive, 913 days
415.7
TCGA-44-3918-01A
0 years, female, white, stage:Stage IA, alive, 1036 days
415.0
TCGA-78-7167-01A
0 years, male, white, stage:Stage IV, dead, 2681 days
414.3
TCGA-44-7672-01A
0 years, female, white, stage:Stage IA, alive, 719 days
413.9
TCGA-55-8090-01A
0 years, male, white, stage:Stage IA, dead, 598 days
413.9
TCGA-71-6725-01A
0 years, female, asian, stage:Stage IB, alive, 256 days
413.6
TCGA-49-6745-01A
0 years, male, white, stage:Stage IIIA, alive, 522 days
413.2
TCGA-64-5774-01A
0 years, male, white, stage:Stage IB, alive, 2676 days
412.2
TCGA-55-8505-01A
0 years, male, white, stage:Stage IIIA, alive, 440 days
411.8
TCGA-99-AA5R-01A
0 years, female, black or african american, stage:Stage IA, alive, 658 days
411.7
TCGA-91-8496-01A
0 years, female, white, stage:Stage IB, alive, 505 days
411.6
TCGA-97-7546-01A
0 years, female, white, stage:Stage IA, alive, 1285 days
411.2
TCGA-55-6543-01A
0 years, female, white, stage:Stage IA, alive, 435 days
409.4
TCGA-MP-A5C7-01A
0 years, female, white, stage:Stage IB, alive, 2248 days
408.9
TCGA-44-7671-01A
0 years, male, black or african american, stage:Stage IB, alive, 889 days
407.9
TCGA-05-4426-01A
0 years, male, stage:Stage IB, alive, 791 days
407.7
TCGA-49-4506-01A
0 years, female, white, stage:Stage IIB, dead, 999 days
407.5
TCGA-99-8033-01A
0 years, female, white, stage:Stage IV, dead, 656 days
406.5
TCGA-44-A47B-01A
0 years, male, white, stage:Stage IB, alive, 287 days
405.9
TCGA-44-A4SU-01A
0 years, female, white, stage:Stage IA, dead, 409 days
405.1
TCGA-55-7914-01A
0 years, female, white, stage:Stage IIA, dead, 187 days
404.8
TCGA-97-8174-01A
0 years, male, white, stage:Stage IIA, dead, 164 days
404.1
TCGA-97-8172-01A
0 years, female, white, stage:Stage IB, alive, 545 days
403.2
TCGA-44-A47A-01A
0 years, female, white, stage:Stage IB, alive, 466 days
402.8
TCGA-95-7944-01A
0 years, male, white, stage:Stage IA, alive, 377 days
402.5
TCGA-44-3919-01A
0 years, female, white, stage:Stage IA, dead, 1026 days
401.8
TCGA-99-8028-01A
0 years, female, black or african american, stage:Stage IA, alive, 1118 days
401.3
TCGA-MP-A4TC-01A
0 years, male, white, stage:Stage IIIA, dead, 74 days
398.2
TCGA-55-7816-01A
0 years, female, white, stage:Stage IV, dead, 468 days
398.2
TCGA-78-7159-01A
0 years, female, white, stage:Stage IA, alive, 1974 days
397.6
TCGA-L4-A4E6-01A
0 years, male, white, stage:Stage IA, alive, 435 days
397.0
TCGA-64-5775-01A
0 years, male, white, stage:Stage IIIA, dead, 62 days
396.9
TCGA-55-8514-01A
0 years, female, black or african american, stage:Stage IB, alive, 520 days
396.8
TCGA-49-4487-01A
0 years, female, white, stage:Stage IA, dead, 855 days
396.7
TCGA-49-6744-01A
0 years, female, white, stage:Stage IIA, alive, 1683 days
396.5
TCGA-91-6830-01A
0 years, female, white, stage:Stage IIA, alive, 60 days
396.5
TCGA-44-6774-01A
0 years, female, white, stage:Stage IIIA, alive, 658 days
395.9
TCGA-69-7760-01A
0 years, male, white, stage:Stage IIB, alive, 202 days
395.4
TCGA-78-7146-01A
0 years, female, white, stage:Stage IIIA, dead, 173 days
395.1
TCGA-97-7937-01A
0 years, male, white, stage:Stage IB, alive, 564 days
394.4
TCGA-MN-A4N4-01A
0 years, male, white, stage:Stage IA, alive, 1175 days
394.3
TCGA-67-6217-01A
0 years, female, white, stage:Stage IIA, alive, 422 days
393.4
TCGA-J2-8192-01A
0 years, female, white, stage:Stage IIA, alive, 739 days
392.4
TCGA-50-8460-01A
0 years, male, white, stage:Stage IA, alive, 829 days
392.0
TCGA-50-5939-01A
0 years, male, white, stage:Stage IB, dead, 460 days
391.2
TCGA-44-6775-01A
0 years, female, white, stage:Stage IB, alive, 705 days
390.4
TCGA-73-7498-01A
0 years, female, white, stage:Stage IA, alive, 1189 days
389.8
TCGA-55-A48X-01A
0 years, female, white, stage:Stage IIA, alive, 689 days
388.6
TCGA-05-4382-01A
0 years, male, stage:Stage IB, alive, 607 days
388.1
TCGA-NJ-A4YI-01A
0 years, female, white, stage:Stage IIIA, dead, 4 days
388.0
TCGA-44-2668-01A
0 years, male, white, stage:Stage IB, dead, 761 days
388.0
TCGA-J2-A4AE-01A
0 years, female, white, stage:Stage IA, alive, 1079 days
386.6
TCGA-93-A4JP-01A
0 years, male, asian, stage:Stage IV, alive, 578 days
386.0
TCGA-97-7938-01A
0 years, female, white, stage:Stage IA, dead, 18 days
385.6
TCGA-73-4659-01A
0 years, male, white, stage:Stage IIIA, dead, 711 days
384.6
TCGA-78-7158-01A
0 years, female, white, stage:Stage IIIB, dead, 179 days
383.5
TCGA-44-3396-01A
0 years, female, white, stage:Stage IIIA, alive, 1130 days
383.5
TCGA-99-7458-01A
0 years, female, white, stage:Stage IIIA, alive, 747 days
382.0
TCGA-69-7974-01A
0 years, female, white, stage:Stage IIIA, alive, 184 days
380.2
TCGA-55-A48Z-01A
0 years, female, white, stage:Stage IIIB, alive, 651 days
380.1
TCGA-62-8399-01A
0 years, male, white, stage:Stage IIIA, alive, 2696 days
379.3
TCGA-44-6779-01A
0 years, female, white, stage:Stage IIB, dead, 500 days
379.1
TCGA-NJ-A55A-01A
0 years, female, white, stage:Stage IB, alive, 15 days
378.8
TCGA-55-6712-01A
0 years, male, white, stage:Stage IIA, dead, 171 days
377.0
TCGA-38-4630-01A
0 years, female, white, stage:Stage IB, dead, 1073 days
376.4
TCGA-78-8660-01A
0 years, male, stage:Stage IIB, dead, 321 days
376.1
TCGA-95-7039-01A
0 years, female, white, stage:Stage IIB, alive, 1272 days
374.4
TCGA-69-7763-01A
0 years, male, white, stage:Stage IA, alive, 690 days
374.1
TCGA-73-4677-01A
0 years, male, white, stage:'--, dead, 38 days
374.0
TCGA-86-8669-01A
0 years, male, white, stage:Stage IA, alive, 938 days
373.9
TCGA-86-8585-01A
0 years, male, white, stage:Stage IB, alive, 353 days
372.9
TCGA-78-7143-01A
0 years, female, white, stage:Stage IB, dead, 4961 days
371.8
TCGA-55-7227-01A
0 years, male, white, stage:Stage IIIA, dead, 952 days
370.1
TCGA-55-7576-01A
0 years, male, black or african american, stage:Stage IB, alive, 670 days
369.5
TCGA-55-6970-01A
0 years, female, white, stage:Stage IIIA, dead, 464 days
369.5
TCGA-44-A4SS-01A
0 years, male, white, stage:Stage IA, alive, 415 days
368.0
TCGA-95-7567-01A
0 years, male, white, stage:Stage IIB, alive, 568 days
367.2
TCGA-55-6985-01A
0 years, female, white, stage:Stage IB, alive, 1233 days
365.6
TCGA-NJ-A55O-01A
0 years, female, white, stage:Stage IIA, alive, 13 days
364.4
TCGA-55-6968-01A
0 years, male, white, stage:Stage IV, dead, 1293 days
363.9
TCGA-NJ-A4YQ-01A
0 years, female, white, stage:Stage IA, alive, 1432 days
362.2
TCGA-55-8616-01A
0 years, female, white, stage:Stage IB, alive, 48 days
360.8
TCGA-55-8206-01A
0 years, male, white, stage:Stage IA, alive, 888 days
360.2
TCGA-44-2657-01A
0 years, female, white, stage:Stage IB, alive, 1351 days
359.8
TCGA-73-4668-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days
357.7
TCGA-78-7162-01A
0 years, male, white, stage:Stage IA, dead, 3169 days
357.7
TCGA-49-AARE-01A
0 years, female, black or african american, stage:Stage IA, dead, 1229 days
356.5
TCGA-62-A472-01A
0 years, male, white, stage:Stage IIB, alive, 910 days
356.3
TCGA-55-8513-01A
0 years, female, white, stage:Stage IIB, alive, 791 days
356.2
TCGA-91-6848-01A
0 years, male, white, stage:Stage IIIA, alive, 224 days
354.0
TCGA-78-7633-01A
0 years, male, white, stage:Stage IB, dead, 1528 days
353.6
TCGA-49-6761-01A
0 years, female, white, stage:Stage IIIA, alive, 354 days
353.4
TCGA-86-8075-01A
0 years, female, white, stage:Stage IB, dead, 694 days
352.2
TCGA-49-AAR2-01A
0 years, male, black or african american, stage:Stage IB, alive, 2224 days
351.4
TCGA-05-4417-01A
0 years, female, stage:Stage IB, alive, 455 days
351.1
TCGA-91-8497-01A
0 years, female, white, stage:Stage IA, dead, 434 days
349.3
TCGA-55-8507-01A
0 years, male, white, stage:Stage IA, alive, 418 days
348.8
TCGA-50-6673-01A
0 years, female, white, stage:Stage I, dead, 22 days
348.2
TCGA-91-6828-01A
0 years, male, white, stage:Stage IA, alive, 323 days
346.9
TCGA-97-A4M1-01A
0 years, female, white, stage:Stage IA, alive, 601 days
346.8
TCGA-55-7910-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1040 days
345.3
TCGA-44-A47G-01A
0 years, female, white, stage:Stage IA, alive, 351 days
344.9
TCGA-MP-A4TK-01A
0 years, female, stage:Stage IIB, dead, 582 days
343.4
TCGA-05-4397-01A
0 years, male, stage:Stage IIB, dead, 731 days
343.2
TCGA-55-7725-01A
0 years, female, white, stage:Stage IA, alive, 442 days
342.7
TCGA-L9-A7SV-01A
0 years, male, black or african american, stage:Stage IIA, alive, 565 days
342.6
TCGA-55-8621-01A
0 years, female, white, stage:Stage IA, alive, 515 days
342.0
TCGA-62-A46V-01A
0 years, female, white, stage:Stage IB, alive, 2199 days
340.0
TCGA-55-8511-01A
0 years, female, white, stage:Stage IB, alive, 552 days
339.6
TCGA-J2-8194-01A
0 years, female, white, stage:Stage IIB, alive, 724 days
339.0
TCGA-55-6979-01A
0 years, female, white, stage:Stage IIB, dead, 237 days
337.6
TCGA-86-8074-01A
0 years, female, white, stage:Stage IIA, alive, 24 days
337.3
TCGA-44-8119-01A
0 years, male, white, stage:Stage IIB, alive, 285 days
337.0
TCGA-86-8671-01A
0 years, female, white, stage:Stage IIB, alive, 839 days
336.9
TCGA-55-7724-01A
0 years, female, white, stage:Stage IB, alive, 705 days
336.6
TCGA-55-8205-01A
0 years, female, white, stage:Stage IIA, alive, 599 days
336.4
TCGA-97-8547-01A
0 years, female, stage:Stage IIIA, alive, 657 days
336.0
TCGA-55-8614-01A
0 years, male, white, stage:Stage IB, alive, 536 days
335.9
TCGA-55-8510-01A
0 years, female, white, stage:Stage IB, alive, 539 days
333.0
TCGA-49-6743-01A
0 years, female, white, stage:Stage IIIA, alive, 1621 days
332.8
TCGA-55-A491-01A
0 years, female, white, stage:Stage IA, alive, 626 days
332.0
TCGA-95-A4VN-01A
0 years, female, white, stage:Stage IIA, alive, 553 days
331.1
TCGA-78-7536-01A
0 years, male, white, stage:Stage IIIA, dead, 244 days
329.2
TCGA-50-5933-01A
0 years, male, white, stage:Stage IIIB, dead, 2393 days
328.9
TCGA-53-A4EZ-01A
0 years, male, white, stage:Stage IIA, alive, 1071 days
328.1
TCGA-4B-A93V-01A
0 years, female, black or african american, stage:Stage IA, dead, 300 days
327.4
TCGA-86-7714-01A
0 years, female, black or african american, stage:Stage IIIA, dead, 625 days
327.1
TCGA-91-6840-01A
0 years, female, white, stage:Stage IA, alive, 372 days
326.9
TCGA-55-8203-01A
0 years, female, white, stage:Stage IA, alive, 547 days
326.0
TCGA-78-8662-01A
0 years, female, stage:Stage IB, dead, 3361 days
324.6
TCGA-44-8117-01A
0 years, female, white, stage:Stage IB, alive, 385 days
322.7
TCGA-44-6147-01A
0 years, female, white, stage:Stage IA, alive, 845 days
320.4
TCGA-86-8076-01A
0 years, male, white, stage:Stage IA, alive, 993 days
319.7
TCGA-50-5049-01A
0 years, male, white, stage:Stage IA, alive, 3094 days
319.5
TCGA-44-6777-01A
0 years, female, white, stage:Stage IB, dead, 987 days
315.5
TCGA-MP-A4TD-01A
0 years, male, white, stage:Stage IIIA, dead, 307 days
315.5
TCGA-05-4398-01A
0 years, female, stage:Stage IIIB, alive, 1431 days
314.3
TCGA-50-5941-01A
0 years, female, white, stage:Stage IIIA, alive, 1474 days
314.2
TCGA-97-7553-01A
0 years, female, white, stage:Stage IA, alive, 1870 days
311.9
TCGA-64-1679-01A
0 years, female, white, stage:Stage IIIA, alive, 2488 days
311.7
TCGA-78-7160-01A
0 years, male, white, stage:Stage IV, dead, 697 days
309.7
TCGA-97-8176-01A
0 years, male, white, stage:Stage IIIA, dead, 468 days
309.4
TCGA-86-8359-01A
0 years, male, white, stage:Stage IIIA, dead, 444 days
308.4
TCGA-67-3771-01A
0 years, female, black or african american, stage:Stage IA, alive, 610 days
307.6
TCGA-97-A4LX-01A
0 years, male, white, stage:Stage IB, alive, 614 days
305.9
TCGA-73-4666-01A
0 years, female, white, stage:Stage IV, alive, 800 days
303.7
TCGA-86-8668-01A
0 years, female, white, stage:Stage IA, alive, 423 days
302.0
TCGA-55-A493-01A
0 years, female, white, stage:Stage IB, alive, 28 days
301.8
TCGA-86-A4P8-01A
0 years, female, white, stage:Stage IIIA, alive, 805 days
301.1
TCGA-69-7761-01A
0 years, male, white, stage:Stage IB, alive, 186 days
300.8
TCGA-97-A4M0-01A
0 years, female, white, stage:Stage IB, alive, 652 days
300.3
TCGA-50-7109-01A
0 years, male, white, stage:Stage IA, dead, 308 days
300.1
TCGA-50-5930-01A
0 years, male, white, stage:Stage IIIA, dead, 282 days
299.8
TCGA-86-7713-01A
0 years, male, white, stage:Stage IIA, alive, 1157 days
299.3
TCGA-97-A4M2-01A
0 years, male, white, stage:Stage IA, alive, 624 days
298.9
TCGA-55-8208-01A
0 years, female, white, stage:Stage IA, alive, 674 days
298.5
TCGA-55-8619-01A
0 years, female, white, stage:Stage IIB, alive, 416 days
296.6
TCGA-50-5942-01A
0 years, female, white, stage:Stage IA, alive, 1847 days
296.0
TCGA-95-7043-01A
0 years, female, white, stage:Stage IA, dead, 503 days
293.4
TCGA-38-7271-01A
0 years, female, white, stage:Stage IA, dead, 800 days
291.3
TCGA-97-A4M7-01A
0 years, male, white, stage:Stage IA, alive, 629 days
291.0
TCGA-55-A48Y-01A
0 years, male, white, stage:Stage IIA, alive, 630 days
290.0
TCGA-78-8640-01A
0 years, male, stage:Stage IIA, alive, 7062 days
289.9
TCGA-O1-A52J-01A
0 years, female, white, stage:Stage IA, dead, 1798 days
289.2
TCGA-69-7973-01A
0 years, female, white, stage:Stage IB, alive, 230 days
287.5
TCGA-38-4625-01A
0 years, female, white, stage:Stage IB, alive, 2973 days
286.0
TCGA-L9-A444-01A
0 years, female, white, stage:Stage IA, alive, 307 days
285.0
TCGA-55-7726-01A
0 years, female, white, stage:Stage IA, alive, 652 days
284.0
TCGA-86-7701-01A
0 years, male, white, stage:Stage IV, alive, 947 days
281.1
TCGA-44-6145-01A
0 years, female, white, stage:Stage IA, alive, 595 days
281.0
TCGA-86-8055-01A
0 years, male, white, stage:Stage IIA, dead, 124 days
280.0
TCGA-55-7994-01A
0 years, male, white, stage:Stage IIB, alive, 603 days
278.7
TCGA-50-8457-01A
0 years, female, black or african american, stage:Stage IA, alive, 1125 days
277.2
TCGA-69-7978-01A
0 years, male, white, stage:Stage IIB, alive, 134 days
275.9
TCGA-55-7574-01A
0 years, female, white, stage:Stage IB, dead, 995 days
275.1
TCGA-55-8508-01A
0 years, female, black or african american, stage:Stage IIA, alive, 617 days
274.9
TCGA-05-4249-01A
0 years, male, stage:Stage IB, alive, 1523 days
274.6
TCGA-55-7995-01A
0 years, female, white, stage:Stage IA, alive, 889 days
274.4
TCGA-64-5779-01A
0 years, male, white, stage:Stage IIIA, alive, 864 days
272.9
TCGA-S2-AA1A-01A
0 years, female, black or african american, stage:Stage IA, alive, 513 days
271.8
TCGA-MP-A4TH-01A
0 years, female, white, stage:Stage IA, alive, 741 days
268.4
TCGA-55-8092-01A
0 years, male, white, stage:Stage IIB, dead, 154 days
266.1
TCGA-55-6987-01A
0 years, male, white, stage:Stage IA, alive, 2137 days
265.9
TCGA-44-6778-01A
0 years, male, black or african american, stage:Stage IA, alive, 1864 days
265.9
TCGA-91-7771-01A
0 years, male, white, stage:Stage IIB, alive, 492 days
264.5
TCGA-53-7626-01A
0 years, female, white, stage:Stage IIA, dead, 929 days
264.2
TCGA-55-8096-01A
0 years, female, white, stage:Stage IB, dead, 719 days
263.1
TCGA-86-6851-01A
0 years, female, white, stage:Stage IIA, alive, 179 days
260.2
TCGA-05-4405-01A
0 years, female, stage:Stage IB, alive, 610 days
257.0
TCGA-93-A4JO-01A
0 years, male, white, stage:Stage IA, dead, 33 days
256.4
TCGA-78-8648-01A
0 years, female, stage:Stage IIB, dead, 1209 days
255.3
TCGA-55-8615-01A
0 years, male, white, stage:Stage IIIA, alive, 446 days
254.4
TCGA-93-A4JQ-01A
0 years, male, white, stage:Stage IA, alive, 526 days
253.8
TCGA-MP-A4SV-01A
0 years, male, stage:Stage IB, dead, 2620 days
248.3
TCGA-55-8204-01A
0 years, female, white, stage:Stage IB, alive, 515 days
246.7
TCGA-69-7765-01A
0 years, male, black or african american, stage:'--, alive, 165 days
242.9
TCGA-91-A4BC-01A
0 years, male, white, stage:Stage IIA, alive, 44 days
239.7
TCGA-MP-A4TJ-01A
0 years, female, stage:Stage IA, dead, 339 days
237.4
TCGA-97-7554-01A
0 years, female, white, stage:Stage IIIA, alive, 775 days
237.1
TCGA-97-7552-01A
0 years, male, white, stage:Stage IB, alive, 1932 days
236.4
TCGA-55-7815-01A
0 years, male, stage:Stage IB, alive, 773 days
233.1
TCGA-86-A4P7-01A
0 years, female, white, stage:Stage IB, alive, 415 days
231.4
TCGA-64-5815-01A
0 years, male, white, stage:Stage IIB, alive, 866 days
230.3
TCGA-93-A4JN-01A
0 years, male, white, stage:Stage IV, alive, 718 days
226.8
TCGA-L4-A4E5-01A
0 years, female, white, stage:Stage I, alive, 578 days
225.3
TCGA-MP-A4T4-01A
0 years, female, white, stage:Stage IIB, dead, 2617 days
222.6
TCGA-55-6971-01A
0 years, female, white, stage:Stage IB, alive, 1400 days
212.2
TCGA-55-A4DF-01A
0 years, male, white, stage:Stage IA, dead, 440 days
209.9
TCGA-55-A4DG-01A
0 years, male, white, stage:Stage IA, alive, 608 days
207.5
TCGA-44-2659-01A
0 years, female, white, stage:Stage IIB, alive, 1367 days
199.8
TCGA-55-6642-01A
0 years, male, white, stage:Stage IB, alive, 2449 days
185.4
TCGA-44-A479-01A
0 years, female, black or african american, stage:Stage IB, alive, 486 days
181.5
TCGA-44-6146-01A
0 years, male, white, stage:Stage IIB, alive, 728 days
173.8
TCGA-55-A490-01A
0 years, male, white, stage:Stage IIA, dead, 99 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5ME is not prognostic in Lung Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
220.0
Number of samples
105
Samples
Sample
Description
TPM
L603
0 years, female, stage:Stage IB, dead, 972 days
555.9
L504
0 years, female, stage:Stage IA, dead, 1295 days
440.8
L620
0 years, female, stage:Stage IIIA, dead, 338 days
439.5
L613
0 years, male, stage:Stage IIIA, dead, 19 days
422.6
L484
0 years, female, stage:Stage IA, alive, 2895 days
422.6
L802
0 years, female, stage:Stage IA, dead, 773 days
414.7
L530
0 years, female, stage:Stage IIA, dead, 308 days
371.0
L569
0 years, female, stage:Stage IA, alive, 2531 days
365.8
L567
0 years, female, stage:Stage IIIA, dead, 1299 days
352.3
L400
0 years, male, stage:Stage IIA, dead, 1233 days
347.0
L511
0 years, female, stage:Stage IIIA, alive, 2942 days
334.7
L532
0 years, female, stage:Stage IA, dead, 301 days
329.9
L782
0 years, female, stage:Stage IIB, alive, 3371 days
327.1
L543
0 years, male, stage:Stage IA, alive, 2711 days
318.9
L446
0 years, female, stage:Stage IIB, dead, 415 days
317.0
L616
0 years, male, stage:Stage IA, dead, 410 days
296.0
L546
0 years, male, stage:Stage IA, dead, 973 days
295.4
L541
0 years, female, stage:Stage IIIA, dead, 915 days
294.1
L462
0 years, male, stage:Stage IIIA, dead, 568 days
292.5
L557
0 years, female, stage:Stage IB, alive, 2580 days
288.5
L596
0 years, female, stage:Stage IA, alive, 2319 days
287.9
L842
0 years, female, stage:Stage IB, alive, 2005 days
287.0
L689
0 years, male, stage:Stage IA, alive, 1943 days
272.0
L887
0 years, male, stage:Stage IA, dead, 374 days
267.1
L682
0 years, female, stage:Stage IIB, dead, 840 days
265.7
L683
0 years, female, stage:Stage IIA, dead, 612 days
263.7
L703
0 years, male, stage:Stage IIA, dead, 1137 days
263.2
L728
0 years, male, stage:Stage IIB, dead, 1128 days
259.5
L749
0 years, female, stage:Stage IIIA, dead, 189 days
258.8
L404
0 years, female, stage:Stage IIA, dead, 2318 days
253.0
L612
0 years, female, stage:Stage IIIA, alive, 2410 days
252.4
L814
0 years, male, stage:Stage IIIA, alive, 2466 days
249.6
L565
0 years, female, stage:Stage IB, dead, 543 days
247.9
L764
0 years, male, stage:Stage IIIA, alive, 1684 days
247.8
L621
0 years, female, stage:Stage IIIA, dead, 1487 days
240.6
L890
0 years, female, stage:Stage IIB, dead, 1264 days
240.1
L440
0 years, male, stage:Stage IIB, dead, 651 days
235.7
L832
0 years, female, stage:Stage IA, alive, 2145 days
233.6
L606
0 years, male, stage:Stage IA, alive, 2336 days
233.6
L673
0 years, female, stage:Stage IA, dead, 568 days
233.2
L626
0 years, female, stage:Stage IA, dead, 1994 days
231.5
L826
0 years, female, stage:Stage IV, dead, 935 days
228.9
L688
0 years, male, stage:Stage IIIA, dead, 789 days
227.9
L619
0 years, female, stage:Stage IIIA, dead, 1905 days
227.0
L827
0 years, male, stage:Stage IIB, dead, 1105 days
225.9
L455
0 years, female, stage:Stage IA, alive, 3315 days
223.5
L831
0 years, female, stage:Stage IB, alive, 2152 days
218.5
L561
0 years, female, stage:Stage IA, alive, 2543 days
210.4
L865
0 years, female, stage:Stage IIB, alive, 1927 days
207.3
L662
0 years, male, stage:Stage IA, dead, 865 days
205.2
L885
0 years, female, stage:Stage IA, alive, 1618 days
204.6
L752
0 years, male, stage:Stage IIIA, alive, 1647 days
201.0
L493
0 years, female, stage:Stage IIB, alive, 2945 days
198.4
L605
0 years, female, stage:Stage IA, alive, 2460 days
197.8
L566
0 years, male, stage:Stage IB, alive, 2489 days
197.1
L638
0 years, male, stage:Stage IA, alive, 2076 days
197.0
L458
0 years, female, stage:Stage IA, dead, 223 days
196.3
L413
0 years, female, stage:Stage IIIA, dead, 313 days
195.8
L585
0 years, female, stage:Stage IIA, dead, 402 days
195.8
L816
0 years, female, stage:Stage IIA, dead, 353 days
194.5
L800
0 years, female, stage:Stage IA, dead, 2417 days
194.3
L473
0 years, female, stage:Stage IA, alive, 3021 days
193.8
L877
0 years, female, stage:Stage IA, alive, 1599 days
193.0
L602
0 years, female, stage:Stage IA, alive, 2277 days
192.8
L617
0 years, male, stage:Stage IIIA, dead, 238 days
192.2
L808
0 years, female, stage:Stage IA, alive, 3001 days
192.2
L710
0 years, female, stage:Stage IIA, alive, 1775 days
189.7
L551
0 years, male, stage:Stage IA, alive, 2924 days
185.0
L531
0 years, male, stage:Stage IB, dead, 928 days
179.8
L810
0 years, female, stage:Stage IIIA, dead, 625 days
179.8
L874
0 years, female, stage:Stage IIIA, alive, 1733 days
179.3
L768
0 years, male, stage:Stage IIIA, dead, 472 days
178.2
L746
0 years, female, stage:Stage IIIA, dead, 594 days
176.6
L599
0 years, male, stage:Stage IB, dead, 2083 days
175.2
L738
0 years, female, stage:Stage IB, dead, 1314 days
174.8
L545
0 years, female, stage:Stage IA, alive, 2874 days
170.0
L678
0 years, female, stage:Stage IB, dead, 1114 days
169.7
L593
0 years, male, stage:Stage IA, dead, 2436 days
169.5
L875
0 years, female, stage:Stage IA, alive, 1675 days
169.4
L439
0 years, male, stage:Stage IIB, dead, 2773 days
168.9
L828
0 years, female, stage:Stage IIB, alive, 2222 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5ME is not prognostic in Lung Squamous Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
556.7
Number of samples
489
Samples
Sample
Description
TPM
TCGA-66-2793-01A
0 years, male, stage:Stage IIIB, dead, 306 days
5775.0
TCGA-94-7033-01A
0 years, male, white, stage:Stage IB, alive, 640 days
1956.8
TCGA-18-3421-01A
0 years, male, white, stage:Stage IB, alive, 2645 days
1690.3
TCGA-33-A5GW-01A
0 years, male, white, stage:Stage IIA, dead, 9 days
1563.5
TCGA-NC-A5HE-01A
0 years, male, white, stage:Stage IIB, alive, 2336 days
1430.1
TCGA-85-8479-01A
0 years, male, white, stage:Stage IA, alive, 468 days
1351.3
TCGA-NC-A5HM-01A
0 years, male, white, stage:Stage IB, alive, 1212 days
1339.3
TCGA-85-A512-01A
0 years, male, white, stage:Stage IIA, alive, 465 days
1322.0
TCGA-56-A49D-01A
0 years, male, white, stage:Stage IIIA, alive, 637 days
1293.1
TCGA-66-2727-01A
0 years, female, stage:Stage IB, dead, 516 days
1280.5
TCGA-NC-A5HI-01A
0 years, female, white, stage:Stage IB, alive, 1743 days
1264.3
TCGA-39-5024-01A
0 years, female, white, stage:Stage IIIA, alive, 2510 days
1248.5
TCGA-85-A4JC-01A
0 years, male, white, stage:Stage IIA, dead, 604 days
1234.7
TCGA-NK-A5D1-01A
0 years, male, white, stage:Stage IIA, alive, 511 days
1214.7
TCGA-63-A5MT-01A
0 years, male, stage:Stage IIB, alive, 498 days
1192.0
TCGA-34-5240-01A
0 years, female, white, stage:Stage IIB, alive, 1541 days
1165.0
TCGA-58-8391-01A
0 years, female, white, stage:Stage IIIA, alive, 2167 days
1138.1
TCGA-34-2596-01A
0 years, male, white, stage:Stage IIB, dead, 80 days
1076.7
TCGA-77-8143-01A
0 years, male, stage:Stage IIIA, dead, 803 days
1074.9
TCGA-21-A5DI-01A
0 years, male, white, stage:Stage IA, alive, 979 days
1054.9
TCGA-68-8250-01A
0 years, male, black or african american, stage:Stage IA, alive, 244 days
1039.3
TCGA-43-7658-01A
0 years, female, white, stage:Stage IA, dead, 2378 days
1033.0
TCGA-77-A5G6-01A
0 years, male, stage:Stage IIIA, dead, 678 days
1019.3
TCGA-77-6844-01A
0 years, male, white, stage:Stage IIIA, dead, 2284 days
1000.3
TCGA-NC-A5HH-01A
0 years, male, white, stage:Stage IA, alive, 37 days
998.1
TCGA-85-6798-01A
0 years, male, white, stage:Stage IIIA, dead, 195 days
996.6
TCGA-63-A5MP-01A
0 years, male, stage:Stage IIB, alive, 769 days
983.5
TCGA-22-5491-01A
0 years, male, white, stage:Stage IA, dead, 1713 days
981.1
TCGA-22-5478-01A
0 years, male, stage:Stage IB, dead, 24 days
971.2
TCGA-NK-A7XE-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 13 days
949.1
TCGA-43-6770-01A
0 years, female, black or african american, stage:Stage IB, alive, 653 days
942.8
TCGA-77-6843-01A
0 years, male, white, stage:Stage IIA, dead, 2224 days
941.9
TCGA-56-8305-01A
0 years, male, white, stage:Stage IB, alive, 105 days
909.2
TCGA-22-A5C4-01A
0 years, male, white, stage:Stage IIA, alive, 671 days
908.0
TCGA-85-A510-01A
0 years, female, white, stage:Stage IIB, alive, 482 days
892.4
TCGA-21-1075-01A
0 years, male, white, stage:Stage IIB, alive, 2134 days
890.3
TCGA-63-A5MM-01A
0 years, female, stage:Stage IIB, dead, 456 days
885.5
TCGA-90-7767-01A
0 years, male, white, stage:Stage IIB, alive, 89 days
884.6
TCGA-92-7341-01A
0 years, male, white, stage:Stage IB, alive, 106 days
881.9
TCGA-33-4582-01A
0 years, male, white, stage:Stage IA, dead, 3149 days
881.6
TCGA-63-6202-01A
male, stage:Stage IIA, alive, 1602 days
880.5
TCGA-NC-A5HO-01A
0 years, female, white, stage:Stage IIIA, alive, 1336 days
875.9
TCGA-77-A5GA-01A
0 years, male, stage:Stage IB, alive, 1280 days
874.9
TCGA-56-8307-01A
0 years, female, white, stage:Stage IIB, alive, 818 days
872.2
TCGA-33-AAS8-01A
0 years, female, black or african american, stage:Stage IA, dead, 1114 days
866.8
TCGA-LA-A7SW-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 408 days
865.8
TCGA-90-7769-01A
0 years, male, white, stage:Stage IIB, alive, 358 days
855.6
TCGA-43-3920-01A
0 years, male, white, stage:Stage IB, alive, 1007 days
853.4
TCGA-22-5483-01A
0 years, male, white, stage:Stage IIA, dead, 573 days
847.2
TCGA-37-4129-01A
0 years, female, white, stage:Stage IA, alive, 242 days
846.5
TCGA-34-5234-01A
0 years, female, white, stage:Stage IA, alive, 2271 days
843.4
TCGA-77-7139-01A
0 years, male, white, stage:Stage IIB, alive, 4261 days
841.9
TCGA-85-A4CL-01A
0 years, male, white, stage:Stage IA, dead, 921 days
840.2
TCGA-39-5036-01A
0 years, male, white, stage:Stage IB, alive, 2165 days
839.0
TCGA-63-A5MJ-01A
0 years, male, stage:Stage IIB, alive, 1824 days
836.4
TCGA-18-5595-01A
0 years, male, stage:Stage IB, dead, 827 days
835.3
TCGA-98-A53J-01A
0 years, male, white, stage:Stage IB, alive, 630 days
834.1
TCGA-NK-A5CR-01A
0 years, male, stage:Stage IB, alive, 2542 days
828.5
TCGA-NC-A5HD-01A
0 years, male, white, stage:Stage IIB, dead, 2 days
826.6
TCGA-77-8140-01A
0 years, female, stage:Stage IIB, dead, 351 days
822.9
TCGA-56-7580-01A
0 years, male, white, stage:Stage IB, alive, 925 days
819.7
TCGA-68-8251-01A
0 years, male, white, stage:Stage IB, alive, 406 days
819.3
TCGA-63-A5MI-01A
0 years, male, stage:Stage IIIA, alive, 1784 days
819.1
TCGA-22-5481-01A
0 years, female, white, stage:Stage IIB, dead, 2409 days
818.2
TCGA-96-8170-01A
0 years, female, white, stage:Stage IIA, alive, 531 days
815.5
TCGA-77-7463-01A
0 years, male, white, stage:Stage IB, dead, 1423 days
811.2
TCGA-56-A4BY-01A
0 years, male, white, stage:Stage IB, dead, 543 days
799.7
TCGA-33-4583-01A
0 years, male, white, stage:Stage IA, dead, 4601 days
796.2
TCGA-85-A5B5-01A
0 years, male, white, stage:Stage IA, alive, 111 days
795.8
TCGA-77-8144-01A
0 years, male, stage:Stage IB, alive, 833 days
792.7
TCGA-94-8035-01A
0 years, male, white, stage:Stage IIB, alive, 122 days
790.3
TCGA-21-5787-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 329 days
789.0
TCGA-94-8491-01A
0 years, male, white, stage:Stage IIA, alive, 810 days
784.7
TCGA-18-3416-01A
0 years, male, stage:Stage IIB, dead, 973 days
784.4
TCGA-58-A46K-01A
0 years, male, white, stage:Stage IIIA, dead, 1045 days
783.3
TCGA-58-8390-01A
0 years, male, white, stage:Stage IIA, alive, 911 days
782.1
TCGA-18-3406-01A
0 years, male, white, stage:Stage IA, dead, 371 days
780.4
TCGA-66-2754-01A
0 years, male, stage:Stage IIIA, alive, 61 days
777.3
TCGA-77-7465-01A
0 years, male, white, stage:Stage IIA, alive, 990 days
774.5
TCGA-98-8021-01A
0 years, female, white, stage:Stage IA, alive, 937 days
773.8
TCGA-94-A5I4-01A
0 years, male, white, stage:Stage IIA, alive, 491 days
769.9
TCGA-77-8007-01A
0 years, male, stage:Stage IIB, dead, 198 days
765.6
TCGA-LA-A446-01A
0 years, male, white, stage:Stage IA, alive, 401 days
763.4
TCGA-NC-A5HR-01A
0 years, female, white, stage:Stage IIA, alive, 1244 days
763.1
TCGA-39-5027-01A
0 years, male, white, stage:Stage IB, alive, 3108 days
761.8
TCGA-56-8629-01A
0 years, male, white, stage:Stage IIA, alive, 481 days
761.8
TCGA-66-2763-01A
0 years, female, stage:Stage IB, alive, 30 days
755.9
TCGA-37-A5EN-01A
0 years, male, white, stage:Stage IIIB, alive, 660 days
750.0
TCGA-85-7843-01A
0 years, male, white, stage:Stage IIA, alive, 35 days
747.5
TCGA-68-A59J-01A
0 years, female, white, stage:Stage IB, alive, 448 days
742.3
TCGA-43-A56V-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 366 days
741.3
TCGA-56-A5DR-01A
0 years, male, white, stage:Stage IA, alive, 4 days
739.7
TCGA-O2-A52Q-01A
0 years, female, white, stage:Stage III, dead, 113 days
733.5
TCGA-94-A4VJ-01A
0 years, female, white, stage:Stage IA, alive, 430 days
732.6
TCGA-66-2766-01A
0 years, male, stage:Stage IIIA, alive, 31 days
732.0
TCGA-22-0940-01A
0 years, male, white, stage:Stage IIA, dead, 669 days
730.1
TCGA-66-2789-01A
0 years, male, stage:Stage IIIB, dead, 123 days
728.9
TCGA-56-7822-01A
0 years, male, black or african american, stage:Stage IIB, dead, 532 days
728.1
TCGA-46-6025-01A
0 years, male, white, stage:Stage IIB, alive, 324 days
724.8
TCGA-85-8277-01A
0 years, male, white, stage:Stage IIIA, dead, 307 days
720.6
TCGA-63-A5MB-01A
0 years, male, stage:Stage IB, alive, 3123 days
720.3
TCGA-63-A5MG-01A
0 years, male, stage:Stage IB, alive, 2148 days
720.3
TCGA-43-2576-01A
0 years, female, white, stage:Stage IIIA, alive, 1223 days
716.5
TCGA-18-3419-01A
0 years, male, stage:Stage IIB, alive, 2811 days
714.5
TCGA-33-AASL-01A
0 years, female, black or african american, stage:Stage IA, dead, 826 days
711.5
TCGA-85-A50Z-01A
0 years, male, white, stage:Stage IIA, alive, 493 days
710.2
TCGA-NC-A5HN-01A
0 years, male, white, stage:Stage IIA, alive, 1499 days
709.0
TCGA-66-2768-01A
0 years, male, stage:Stage IIB, alive, 61 days
702.9
TCGA-96-7545-01A
0 years, male, white, stage:Stage IA, dead, 1736 days
699.8
TCGA-77-7338-01A
0 years, male, white, stage:Stage IB, dead, 5 days
699.1
TCGA-O2-A5IB-01A
0 years, female, white, stage:Stage III, dead, 340 days
697.0
TCGA-43-8116-01A
0 years, male, white, stage:Stage IA, alive, 358 days
695.5
TCGA-22-5482-01A
0 years, male, white, stage:Stage IB, dead, 357 days
691.7
TCGA-85-7710-01A
0 years, female, white, stage:Stage IA, alive, 42 days
690.3
TCGA-58-A46N-01A
0 years, male, white, stage:Stage IB, alive, 910 days
686.8
TCGA-NK-A5CT-01A
0 years, male, white, stage:Stage IA, alive, 1997 days
676.8
TCGA-33-AASJ-01A
0 years, male, black or african american, stage:Stage IB, dead, 3600 days
673.2
TCGA-22-5473-01A
0 years, male, white, stage:'--, dead, 1933 days
672.1
TCGA-60-2726-01A
0 years, male, white, stage:Stage IIA, dead, 358 days
671.5
TCGA-70-6722-01A
0 years, male, asian, stage:Stage IIIA, alive, 367 days
668.5
TCGA-33-AASB-01A
0 years, male, black or african american, stage:Stage IB, dead, 211 days
667.7
TCGA-66-2755-01A
0 years, male, stage:Stage IB, alive, 28 days
664.4
TCGA-34-A5IX-01A
0 years, male, white, stage:Stage IIB, alive, 1031 days
664.4
TCGA-37-4130-01A
0 years, male, white, stage:Stage IA, alive, 247 days
663.9
TCGA-56-8082-01A
0 years, female, white, stage:Stage IIA, alive, 455 days
662.7
TCGA-33-4589-01A
0 years, female, white, stage:Stage IIB, dead, 47 days
662.4
TCGA-51-4080-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 12 days
661.6
TCGA-NC-A5HJ-01A
0 years, male, white, stage:Stage IIB, dead, 418 days
656.9
TCGA-85-8352-01A
0 years, male, white, stage:Stage IIIA, dead, 161 days
656.8
TCGA-77-7141-01A
0 years, male, white, stage:Stage IB, alive, 15 days
656.1
TCGA-21-1072-01A
0 years, male, white, stage:Stage IB, alive, 3016 days
654.7
TCGA-52-7622-01A
0 years, female, white, stage:Stage IA, alive, 862 days
654.0
TCGA-85-A53L-01A
0 years, male, asian, stage:Stage IIA, alive, 377 days
652.7
TCGA-85-7950-01A
0 years, male, white, stage:Stage IB, alive, 576 days
651.5
TCGA-94-A5I6-01A
0 years, male, white, stage:Stage IIB, alive, 538 days
648.9
TCGA-66-2757-01A
0 years, female, stage:Stage IA, dead, 1338 days
647.6
TCGA-90-A59Q-01A
0 years, female, white, stage:Stage IIA, dead, 322 days
646.7
TCGA-63-A5MY-01A
0 years, male, stage:Stage IA, alive, 1052 days
641.1
TCGA-58-A46J-01A
0 years, male, white, stage:Stage IIB, alive, 2589 days
634.3
TCGA-46-3765-01A
0 years, female, white, stage:Stage IA, alive, 405 days
633.9
TCGA-52-7810-01A
0 years, female, white, stage:Stage IIB, alive, 923 days
632.2
TCGA-22-4613-01A
0 years, female, white, stage:Stage IA, dead, 358 days
630.1
TCGA-33-6738-01A
0 years, male, white, stage:Stage IIIA, alive, 1927 days
629.0
TCGA-33-4532-01A
0 years, male, white, stage:Stage IB, dead, 3924 days
628.9
TCGA-33-4587-01A
0 years, female, white, stage:Stage IB, dead, 1656 days
624.3
TCGA-34-8455-01A
0 years, male, white, stage:Stage IV, dead, 123 days
622.5
TCGA-77-7140-01A
0 years, female, white, stage:Stage IIB, dead, 632 days
622.3
TCGA-37-4132-01A
0 years, female, white, stage:Stage IV, alive, 227 days
621.6
TCGA-85-8664-01A
0 years, male, white, stage:Stage IIB, dead, 550 days
621.3
TCGA-94-7557-01A
0 years, male, black or african american, stage:Stage IB, dead, 5 days
620.7
TCGA-43-5670-01A
0 years, male, white, stage:Stage IIA, alive, 849 days
620.1
TCGA-56-5898-01A
0 years, male, white, stage:Stage IA, alive, 555 days
618.4
TCGA-39-5039-01A
0 years, male, white, stage:Stage IIA, dead, 544 days
617.9
TCGA-66-2771-01A
0 years, male, stage:Stage IIB, alive, 578 days
616.8
TCGA-MF-A522-01A
0 years, male, white, stage:Stage IB, dead, 360 days
616.1
TCGA-46-3768-01A
0 years, male, white, stage:Stage IIIA, dead, 299 days
616.0
TCGA-21-1082-01A
0 years, male, white, stage:Stage IB, alive, 3644 days
610.5
TCGA-77-7138-01A
0 years, male, stage:Stage IB, dead, 340 days
609.6
TCGA-63-A5ML-01A
0 years, male, stage:Stage IB, alive, 1386 days
606.7
TCGA-18-3412-01A
0 years, male, white, stage:Stage IB, dead, 345 days
602.0
TCGA-66-2787-01A
0 years, male, stage:Stage IA, alive, 1217 days
601.9
TCGA-22-5492-01A
0 years, female, stage:Stage IIIA, dead, 506 days
600.6
TCGA-52-7809-01A
0 years, male, white, stage:Stage IB, dead, 166 days
599.2
TCGA-52-7812-01A
0 years, male, white, stage:'--, dead, 835 days
597.7
TCGA-85-8354-01A
0 years, male, white, stage:Stage IB, alive, 995 days
596.5
TCGA-63-A5MH-01A
0 years, male, stage:Stage IA, alive, 2026 days
595.5
TCGA-56-7731-01A
0 years, female, white, stage:Stage IB, dead, 3 days
595.4
TCGA-85-7844-01A
0 years, male, white, stage:Stage IB, alive, 911 days
595.1
TCGA-85-8070-01A
0 years, male, white, stage:Stage IB, alive, 960 days
592.6
TCGA-60-2695-01A
0 years, female, white, stage:Stage IB, alive, 642 days
589.6
TCGA-O2-A52N-01A
0 years, male, white, stage:Stage I, dead, 1006 days
587.3
TCGA-85-A4JB-01A
0 years, male, white, stage:Stage IIB, alive, 942 days
585.0
TCGA-56-A5DS-01A
0 years, female, white, stage:Stage IB, alive, 8 days
581.8
TCGA-22-5471-01A
0 years, male, white, stage:Stage IB, alive, 1845 days
581.1
TCGA-21-1078-01A
0 years, male, white, stage:Stage IB, dead, 474 days
579.7
TCGA-NC-A5HK-01A
0 years, female, white, stage:Stage IIB, alive, 128 days
579.1
TCGA-77-7335-01A
0 years, female, white, stage:Stage IIIB, dead, 2133 days
577.1
TCGA-60-2724-01A
0 years, male, white, stage:Stage IIIA, alive, 717 days
574.8
TCGA-66-2778-01A
0 years, female, stage:Stage IIIB, alive, 578 days
568.7
TCGA-66-2756-01A
0 years, male, stage:Stage IIIB, alive, 30 days
568.3
TCGA-98-A538-01A
0 years, male, white, stage:Stage IIB, alive, 826 days
568.0
TCGA-39-5040-01A
0 years, male, white, stage:Stage IIIA, dead, 519 days
567.4
TCGA-39-5029-01A
0 years, male, white, stage:Stage IIIA, dead, 740 days
566.0
TCGA-22-4601-01A
0 years, female, white, stage:Stage IIIA, dead, 1057 days
565.9
TCGA-37-A5EM-01A
0 years, male, white, stage:Stage II, alive, 867 days
565.8
TCGA-77-A5GF-01A
0 years, male, stage:Stage IIA, dead, 840 days
565.6
TCGA-66-2782-01A
0 years, male, stage:Stage IIB, dead, 365 days
564.8
TCGA-34-5236-01A
0 years, male, white, stage:Stage IIB, dead, 276 days
561.5
TCGA-60-2720-01A
0 years, female, white, stage:Stage IB, alive, 97 days
560.1
TCGA-39-5016-01A
0 years, male, white, stage:Stage IIA, alive, 3850 days
559.4
TCGA-60-2716-01A
0 years, male, stage:Stage IIB, alive, 1475 days
559.3
TCGA-NC-A5HG-01A
0 years, male, white, stage:Stage IIIA, alive, 1963 days
556.8
TCGA-18-3417-01A
0 years, male, stage:Stage IV, dead, 1097 days
554.4
TCGA-66-2758-01A
0 years, male, stage:Stage IB, alive, 639 days
553.9
TCGA-34-2600-01A
0 years, female, white, stage:Stage IA, dead, 1874 days
553.3
TCGA-43-3394-01A
0 years, male, black or african american, stage:Stage IB, dead, 1190 days
552.9
TCGA-37-A5EL-01A
0 years, male, white, stage:Stage IIB, dead, 1143 days
551.8
TCGA-22-4591-01A
0 years, male, white, stage:Stage IIIA, dead, 623 days
551.0
TCGA-39-5037-01A
0 years, male, white, stage:Stage IIA, alive, 1690 days
550.0
TCGA-22-5479-01A
0 years, male, white, stage:Stage IB, dead, 2625 days
549.2
TCGA-NC-A5HT-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
547.6
TCGA-34-5241-01A
0 years, male, white, stage:Stage IB, dead, 515 days
545.4
TCGA-56-A4ZJ-01A
0 years, female, white, stage:Stage IA, alive, 640 days
543.3
TCGA-33-4586-01A
0 years, male, white, stage:Stage IIIA, dead, 428 days
543.0
TCGA-56-8622-01A
0 years, male, white, stage:Stage IB, alive, 55 days
542.0
TCGA-60-2719-01A
0 years, female, white, stage:Stage IB, alive, 1297 days
541.2
TCGA-18-3415-01A
0 years, male, stage:Stage IB, dead, 2803 days
538.5
TCGA-66-2769-01A
0 years, male, stage:Stage IIIB, dead, 215 days
537.8
TCGA-22-5477-01A
0 years, male, white, stage:Stage IA, dead, 1346 days
536.8
TCGA-56-8624-01A
0 years, male, white, stage:Stage IIB, alive, 420 days
536.8
TCGA-52-7811-01A
0 years, male, white, stage:Stage IB, dead, 266 days
535.3
TCGA-85-8351-01A
0 years, male, white, stage:Stage IIA, alive, 510 days
535.1
TCGA-94-8490-01A
0 years, male, white, stage:Stage IIB, alive, 153 days
534.3
TCGA-58-8388-01A
0 years, male, white, stage:Stage IB, dead, 412 days
533.9
TCGA-NC-A5HP-01A
0 years, male, white, stage:Stage IV, dead, 770 days
533.1
TCGA-77-A5G1-01A
0 years, male, stage:Stage IIIA, alive, 4026 days
532.2
TCGA-66-2770-01A
0 years, male, stage:Stage IB, alive, 700 days
531.9
TCGA-18-4086-01A
0 years, male, stage:Stage IB, dead, 85 days
531.5
TCGA-39-5028-01A
0 years, male, white, stage:Stage IIIA, dead, 52 days
529.8
TCGA-37-4135-01A
0 years, male, white, stage:Stage IB, alive, 207 days
529.0
TCGA-43-6143-01A
0 years, male, white, stage:Stage IB, alive, 699 days
529.0
TCGA-58-8393-01A
0 years, female, white, stage:Stage IB, alive, 1058 days
528.0
TCGA-18-3410-01A
0 years, male, stage:Stage IIB, dead, 146 days
525.7
TCGA-58-8387-01A
0 years, male, white, stage:Stage IIA, dead, 403 days
524.6
TCGA-60-2706-01A
0 years, male, white, stage:Stage IA, alive, 2820 days
523.6
TCGA-34-8454-01A
0 years, female, white, stage:Stage IIIA, alive, 1180 days
523.5
TCGA-43-2578-01A
0 years, female, white, stage:Stage IA, dead, 684 days
523.2
TCGA-22-4605-01A
0 years, female, stage:Stage IB, dead, 974 days
520.7
TCGA-66-2785-01A
0 years, male, stage:Stage IB, alive, 60 days
520.3
TCGA-77-7337-01A
0 years, male, white, stage:Stage IIB, dead, 3253 days
520.1
TCGA-51-4079-01A
0 years, female, black or african american, stage:Stage IB, dead, 12 days
516.3
TCGA-98-8022-01A
0 years, male, white, stage:Stage IA, dead, 933 days
514.0
TCGA-18-4721-01A
0 years, male, white, stage:Stage IA, alive, 4694 days
511.6
TCGA-51-6867-01A
0 years, female, white, stage:Stage I, dead, 1856 days
510.9
TCGA-96-8169-01A
0 years, female, white, stage:Stage IA, alive, 557 days
509.6
TCGA-56-8304-01A
0 years, female, white, stage:Stage IA, alive, 106 days
505.1
TCGA-92-8063-01A
0 years, male, white, stage:Stage IIIA, alive, 122 days
503.8
TCGA-85-A4QQ-01A
0 years, male, white, stage:Stage IB, dead, 927 days
503.1
TCGA-34-2608-01A
0 years, male, white, stage:Stage IB, dead, 1000 days
501.8
TCGA-18-3414-01A
0 years, male, asian, stage:Stage IV, dead, 716 days
499.0
TCGA-56-8503-01A
0 years, female, white, stage:Stage IIB, alive, 41 days
496.7
TCGA-60-2722-01A
0 years, male, white, stage:Stage IIB, alive, 908 days
496.3
TCGA-68-7755-01A
0 years, female, white, stage:Stage IIA, alive, 83 days
496.3
TCGA-63-A5MW-01A
0 years, male, stage:Stage IB, alive, 1639 days
495.9
TCGA-92-7340-01A
0 years, female, white, stage:Stage IIA, alive, 82 days
495.8
TCGA-22-1016-01A
0 years, male, white, stage:Stage IB, dead, 822 days
489.9
TCGA-96-7544-01A
0 years, male, white, stage:Stage IIB, dead, 2160 days
485.3
TCGA-18-3409-01A
0 years, male, white, stage:Stage IA, alive, 3747 days
483.8
TCGA-77-8130-01A
0 years, male, stage:Stage IIB, alive, 4765 days
483.6
TCGA-56-7223-01A
0 years, male, white, stage:Stage IIIA, dead, 442 days
482.4
TCGA-L3-A524-01A
0 years, female, white, stage:Stage IIB, dead, 490 days
480.2
TCGA-77-6842-01A
0 years, male, white, stage:Stage IIB, dead, 899 days
480.0
TCGA-NC-A5HF-01A
0 years, male, white, stage:Stage IIIB, dead, 138 days
480.0
TCGA-22-4607-01A
0 years, male, white, stage:Stage IB, dead, 587 days
479.9
TCGA-60-2725-01A
0 years, male, white, stage:Stage IB, alive, 816 days
478.8
TCGA-96-A4JK-01A
0 years, male, white, stage:Stage IIA, alive, 589 days
477.6
TCGA-21-5783-01A
0 years, male, white, stage:Stage IB, dead, 2680 days
475.9
TCGA-43-5668-01A
0 years, male, white, stage:Stage IIA, dead, 559 days
475.7
TCGA-O2-A52V-01A
0 years, female, black or african american, stage:Stage II, dead, 1335 days
475.3
TCGA-58-8386-01A
0 years, male, stage:Stage IV, dead, 1 days
475.3
TCGA-34-5232-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2471 days
474.7
TCGA-85-8355-01A
0 years, male, white, stage:Stage IA, alive, 61 days
474.3
TCGA-37-3783-01A
0 years, male, white, stage:Stage IIIA, alive, 122 days
472.8
TCGA-56-7730-01A
0 years, male, white, stage:Stage IIA, dead, 198 days
472.7
TCGA-22-5485-01A
0 years, female, white, stage:Stage IA, dead, 916 days
471.3
TCGA-77-A5G3-01A
0 years, male, stage:Stage IIB, alive, 4570 days
470.8
TCGA-60-2698-01A
0 years, male, white, stage:Stage IIB, dead, 311 days
470.6
TCGA-77-7142-01A
0 years, female, white, stage:Stage IB, alive, 2227 days
470.5
TCGA-66-2800-01A
0 years, male, stage:Stage IIIB, alive, 1492 days
469.2
TCGA-43-7657-01A
0 years, female, white, stage:Stage IA, alive, 236 days
468.6
TCGA-43-A474-01A
0 years, male, white, stage:Stage IIA, alive, 353 days
467.1
TCGA-NK-A5CX-01A
0 years, male, white, stage:Stage IIA, alive, 111 days
464.0
TCGA-34-5929-01A
0 years, female, white, stage:Stage IB, dead, 151 days
461.7
TCGA-77-8128-01A
0 years, male, stage:Stage IIIA, dead, 1150 days
461.4
TCGA-18-4083-01A
0 years, male, white, stage:Stage IIB, dead, 188 days
459.9
TCGA-O2-A52W-01A
0 years, male, black or african american, stage:Stage I, dead, 261 days
458.7
TCGA-J1-A4AH-01A
0 years, male, white, stage:Stage IIA, alive, 581 days
458.4
TCGA-58-8392-01A
0 years, male, white, stage:Stage IB, dead, 501 days
457.4
TCGA-21-5784-01A
0 years, female, white, stage:Stage IB, alive, 1268 days
457.4
TCGA-63-A5MV-01A
0 years, male, stage:Stage IIA, alive, 1100 days
457.4
TCGA-85-A511-01A
0 years, male, white, stage:Stage IIB, dead, 455 days
456.6
TCGA-43-A475-01A
0 years, female, white, stage:Stage IIB, alive, 296 days
455.3
TCGA-96-A4JL-01A
0 years, female, asian, stage:Stage IIA, alive, 842 days
454.4
TCGA-22-5480-01A
0 years, female, white, stage:Stage IA, dead, 2170 days
453.8
TCGA-34-8456-01A
0 years, female, white, stage:Stage IIA, alive, 804 days
453.6
TCGA-85-A4CN-01A
0 years, female, white, stage:Stage IIB, alive, 1038 days
453.4
TCGA-33-4538-01A
0 years, male, white, stage:Stage IIIA, dead, 2979 days
451.4
TCGA-63-A5MR-01A
0 years, female, stage:Stage IB, alive, 2716 days
451.3
TCGA-56-8504-01A
0 years, male, white, stage:Stage IB, alive, 510 days
448.4
TCGA-85-8288-01A
0 years, male, white, stage:Stage IIA, dead, 402 days
448.4
TCGA-XC-AA0X-01A
0 years, female, black or african american, stage:Stage IA, dead, 6 days
447.5
TCGA-56-7221-01A
0 years, male, white, stage:Stage IB, alive, 608 days
447.4
TCGA-39-5021-01A
0 years, male, white, stage:Stage IB, dead, 2086 days
447.1
TCGA-77-8133-01A
0 years, male, stage:Stage IIA, dead, 1640 days
445.6
TCGA-77-8136-01A
0 years, female, stage:Stage IIB, dead, 1189 days
445.4
TCGA-85-7696-01A
0 years, male, white, stage:Stage IA, alive, 1111 days
445.0
TCGA-66-2753-01A
0 years, male, stage:Stage IB, alive, 31 days
444.4
TCGA-56-8623-01A
0 years, male, white, stage:Stage IB, dead, 692 days
442.6
TCGA-22-1017-01A
0 years, male, white, stage:Stage IA, dead, 1485 days
439.7
TCGA-37-5819-01A
0 years, male, white, stage:Stage IIIA, alive, 103 days
439.0
TCGA-56-8309-01A
0 years, male, white, stage:Stage IA, alive, 428 days
438.8
TCGA-85-8481-01A
0 years, male, white, stage:Stage IIB, dead, 236 days
433.7
TCGA-85-A4QR-01A
0 years, male, white, stage:Stage IB, alive, 600 days
431.3
TCGA-34-7107-01A
0 years, male, white, stage:Stage II, dead, 34 days
429.4
TCGA-33-AASI-01A
0 years, female, black or african american, stage:Stage IIB, dead, 1344 days
427.5
TCGA-22-0944-01A
0 years, male, white, stage:Stage IB, dead, 223 days
426.1
TCGA-85-7698-01A
0 years, male, white, stage:Stage IA, alive, 952 days
425.8
TCGA-21-1081-01A
0 years, male, white, stage:Stage IIB, dead, 284 days
425.6
TCGA-77-8146-01A
0 years, male, stage:Stage IA, alive, 3189 days
424.8
TCGA-22-1012-01A
0 years, female, white, stage:Stage IB, dead, 429 days
424.0
TCGA-66-2759-01A
0 years, male, stage:Stage IIIA, alive, 762 days
423.4
TCGA-21-1083-01A
0 years, male, white, stage:Stage IA, dead, 1315 days
421.7
TCGA-90-6837-01A
0 years, male, white, stage:Stage IIB, alive, 758 days
420.8
TCGA-56-A4ZK-01A
0 years, female, white, stage:Stage IB, alive, 570 days
416.5
TCGA-77-8153-01A
0 years, female, stage:Stage IB, alive, 1992 days
414.4
TCGA-22-4593-01A
0 years, male, white, stage:Stage IIA, dead, 1067 days
413.9
TCGA-60-2714-01A
0 years, female, white, stage:Stage IIB, alive, 1531 days
409.9
TCGA-63-7020-01A
male, stage:Stage IA, alive, 2133 days
405.8
TCGA-34-5239-01A
0 years, male, white, stage:Stage IIIA, alive, 1834 days
404.3
TCGA-77-A5FZ-01A
0 years, male, stage:Stage IIIB, dead, 3838 days
404.1
TCGA-56-A62T-01A
0 years, male, black or african american, stage:Stage IIA, alive, 440 days
403.9
TCGA-77-A5GH-01A
0 years, male, stage:Stage IB, alive, 1182 days
402.4
TCGA-56-1622-01A
0 years, male, white, stage:Stage IB, dead, 881 days
402.1
TCGA-56-7579-01A
0 years, male, white, stage:Stage IIIA, dead, 951 days
401.6
TCGA-85-8052-01A
0 years, male, white, stage:Stage IIB, alive, 734 days
401.6
TCGA-85-7697-01A
0 years, male, white, stage:Stage IIB, alive, 1063 days
401.5
TCGA-85-8584-01A
0 years, male, white, stage:Stage IIA, dead, 383 days
401.4
TCGA-85-8580-01A
0 years, female, white, stage:Stage IB, alive, 1113 days
400.6
TCGA-66-2792-01A
0 years, male, stage:Stage IIB, alive, 913 days
400.5
TCGA-NC-A5HQ-01A
0 years, male, white, stage:Stage IIIA, dead, 448 days
400.1
TCGA-77-8008-01A
0 years, male, stage:Stage IB, dead, 2639 days
399.6
TCGA-33-6737-01A
0 years, male, white, stage:Stage IIIA, dead, 601 days
399.5
TCGA-90-7964-01A
0 years, male, white, stage:Stage IB, alive, 428 days
398.6
TCGA-21-5786-01A
0 years, male, white, stage:Stage IB, alive, 1032 days
396.2
TCGA-L3-A4E7-01A
0 years, male, white, stage:Stage IB, alive, 392 days
396.2
TCGA-56-7582-01A
0 years, male, white, stage:Stage IB, alive, 601 days
395.5
TCGA-58-A46M-01A
0 years, male, white, stage:Stage IIB, alive, 1072 days
394.3
TCGA-22-5472-01A
0 years, male, white, stage:Stage IB, dead, 1975 days
393.9
TCGA-34-5927-01A
0 years, female, white, stage:Stage IA, alive, 1361 days
393.2
TCGA-39-5019-01A
0 years, male, white, stage:Stage IB, alive, 3387 days
392.2
TCGA-33-A4WN-01A
0 years, male, white, stage:Stage IB, dead, 143 days
390.9
TCGA-66-2791-01A
0 years, male, stage:Stage IIIB, dead, 153 days
390.2
TCGA-39-5034-01A
0 years, female, white, stage:Stage IIB, dead, 1107 days
387.4
TCGA-94-7943-01A
0 years, male, white, stage:Stage IA, alive, 559 days
386.9
TCGA-39-5011-01A
0 years, female, white, stage:Stage IA, alive, 4053 days
386.5
TCGA-18-3407-01A
0 years, male, asian, stage:Stage IB, dead, 136 days
385.7
TCGA-77-8138-01A
0 years, male, stage:Stage IB, dead, 539 days
385.5
TCGA-77-8150-01A
0 years, male, stage:Stage IIIA, dead, 1655 days
385.2
TCGA-85-A4PA-01A
0 years, male, white, stage:Stage IB, alive, 741 days
384.4
TCGA-77-8154-01A
0 years, male, stage:Stage IA, alive, 1841 days
384.3
TCGA-85-A513-01A
0 years, female, asian, stage:Stage IA, alive, 910 days
384.1
TCGA-56-8628-01A
0 years, male, white, stage:Stage IA, alive, 616 days
383.5
TCGA-21-5782-01A
0 years, female, white, stage:Stage IB, dead, 962 days
383.4
TCGA-98-A53A-01A
0 years, male, black or african american, stage:Stage IB, dead, 552 days
383.4
TCGA-66-2734-01A
0 years, female, stage:Stage IB, alive, 1311 days
382.6
TCGA-60-2723-01A
0 years, female, white, stage:Stage IB, alive, 1092 days
382.6
TCGA-85-8072-01A
0 years, male, white, stage:Stage IA, alive, 932 days
382.0
TCGA-37-3792-01A
0 years, male, white, stage:Stage IB, alive, 12 days
380.0
TCGA-43-6647-01A
0 years, female, white, stage:Stage IIB, alive, 757 days
379.6
TCGA-85-8350-01A
0 years, male, white, stage:Stage IA, alive, 683 days
379.4
TCGA-90-A4EE-01A
0 years, male, white, stage:Stage IIA, alive, 688 days
379.2
TCGA-51-4081-01A
0 years, male, white, stage:Stage IIB, alive, 911 days
378.3
TCGA-33-AASD-01A
0 years, male, black or african american, stage:Stage IA, dead, 2249 days
377.9
TCGA-63-7023-01A
male, stage:Stage IIA, alive, 1682 days
375.1
TCGA-60-2696-01A
0 years, female, black or african american, stage:Stage IIA, dead, 109 days
375.1
TCGA-60-2715-01A
0 years, male, white, stage:Stage IA, dead, 1075 days
372.8
TCGA-39-5035-01A
0 years, female, white, stage:Stage IA, alive, 2080 days
370.7
TCGA-21-1080-01A
0 years, male, white, stage:Stage IB, alive, 3724 days
369.0
TCGA-66-2786-01A
0 years, female, stage:Stage IA, alive, 790 days
369.0
TCGA-77-8156-01A
0 years, male, stage:Stage IB, alive, 1106 days
365.5
TCGA-60-2713-01A
0 years, male, white, stage:Stage IB, alive, 1731 days
365.1
TCGA-85-7699-01A
0 years, male, white, stage:Stage IIIA, dead, 1001 days
365.0
TCGA-85-8276-01A
0 years, male, white, stage:Stage IIA, alive, 1050 days
364.8
TCGA-21-1070-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 3636 days
364.1
TCGA-66-2777-01A
0 years, male, stage:Stage IB, alive, 61 days
363.3
TCGA-66-2795-01A
0 years, male, stage:Stage IIIB, alive, 122 days
361.9
TCGA-56-5897-01A
0 years, male, white, stage:Stage IA, alive, 378 days
361.4
TCGA-22-4595-01A
0 years, male, white, stage:Stage IIIA, dead, 734 days
360.6
TCGA-37-4141-01A
0 years, female, white, stage:Stage IA, alive, 12 days
359.1
TCGA-33-4566-01A
0 years, male, white, stage:Stage IB, dead, 5287 days
358.9
TCGA-98-A539-01A
0 years, male, white, stage:Stage IIB, alive, 173 days
357.0
TCGA-60-2710-01A
0 years, female, white, stage:Stage IIA, alive, 2024 days
356.3
TCGA-39-5031-01A
0 years, female, stage:Stage IA, dead, 1841 days
355.2
TCGA-46-3769-01A
0 years, male, white, stage:'--, alive, 135 days
354.4
TCGA-22-4599-01A
0 years, female, white, stage:Stage IB, dead, 1161 days
354.3
TCGA-37-3789-01A
0 years, male, white, stage:Stage IB, alive, 13 days
351.7
TCGA-85-8048-01A
0 years, male, white, stage:Stage IA, alive, 765 days
350.9
TCGA-56-7222-01A
0 years, male, white, stage:Stage IB, dead, 562 days
350.8
TCGA-98-A53D-01A
0 years, male, white, stage:Stage IIB, dead, 645 days
349.8
TCGA-56-8201-01A
0 years, male, white, stage:Stage IIB, dead, 397 days
349.8
TCGA-60-2709-01A
0 years, male, black or african american, stage:Stage IB, alive, 1505 days
349.4
TCGA-66-2742-01A
0 years, male, stage:Stage IV, alive, 641 days
348.8
TCGA-66-2790-01A
0 years, male, stage:Stage IIB, alive, 699 days
346.5
TCGA-22-1002-01A
0 years, male, white, stage:Stage IA, dead, 131 days
345.9
TCGA-34-5928-01A
0 years, female, white, stage:Stage IIB, alive, 1196 days
345.4
TCGA-21-1076-01A
0 years, female, white, stage:Stage IB, alive, 1852 days
345.3
TCGA-66-2773-01A
0 years, male, stage:Stage IB, dead, 92 days
344.8
TCGA-77-8131-01A
0 years, male, stage:Stage IB, dead, 383 days
343.9
TCGA-98-8020-01A
0 years, female, black or african american, stage:Stage IIIA, dead, 84 days
342.1
TCGA-68-7756-01A
0 years, male, white, stage:Stage IIIA, alive, 202 days
341.9
TCGA-NC-A5HL-01A
0 years, male, white, stage:Stage IIA, dead, 88 days
340.4
TCGA-77-8148-01A
0 years, male, stage:Stage IIIA, alive, 2023 days
339.7
TCGA-60-2708-01A
0 years, female, white, stage:Stage IIB, alive, 2447 days
338.1
TCGA-21-1071-01A
0 years, male, white, stage:Stage IB, dead, 1426 days
337.9
TCGA-60-2703-01A
0 years, male, white, stage:Stage IIB, dead, 2945 days
337.8
TCGA-66-2788-01A
0 years, male, stage:Stage IB, alive, 699 days
337.8
TCGA-34-5231-01A
0 years, male, white, stage:Stage IA, dead, 1984 days
337.6
TCGA-66-2794-01A
0 years, male, stage:Stage IIIB, alive, 1645 days
335.3
TCGA-68-A59I-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 492 days
335.1
TCGA-85-8049-01A
0 years, male, white, stage:Stage IB, alive, 579 days
335.0
TCGA-56-8626-01A
0 years, male, white, stage:Stage IA, dead, 302 days
334.5
TCGA-58-A46L-01A
0 years, male, white, stage:Stage IIIA, alive, 1723 days
333.4
TCGA-98-A53H-01A
0 years, female, white, stage:Stage IA, alive, 618 days
331.3
TCGA-63-A5MS-01A
0 years, male, stage:Stage IB, alive, 2381 days
330.5
TCGA-46-3767-01A
0 years, male, white, stage:Stage IA, alive, 396 days
330.2
TCGA-85-8666-01A
0 years, male, white, stage:Stage IB, dead, 687 days
329.8
TCGA-56-A4BW-01A
0 years, male, white, stage:Stage IIA, alive, 585 days
327.9
TCGA-92-8065-01A
0 years, female, white, stage:Stage IIB, alive, 70 days
326.5
TCGA-85-6175-01A
0 years, female, white, stage:Stage IIB, dead, 294 days
324.9
TCGA-90-7766-01A
0 years, female, white, stage:Stage IA, alive, 289 days
324.3
TCGA-21-1077-01A
0 years, male, white, stage:Stage IIB, dead, 1058 days
323.8
TCGA-85-8071-01A
0 years, male, white, stage:Stage IIA, alive, 815 days
323.7
TCGA-43-7656-01A
0 years, male, white, stage:Stage IA, alive, 596 days
322.7
TCGA-60-2721-01A
0 years, male, white, stage:Stage IB, alive, 983 days
313.8
TCGA-63-7021-01A
male, stage:Stage IA, alive, 2142 days
312.9
TCGA-22-5474-01A
0 years, male, white, stage:Stage IB, dead, 445 days
310.0
TCGA-98-8023-01A
0 years, male, white, stage:Stage IIIA, alive, 649 days
305.9
TCGA-66-2780-01A
0 years, male, stage:Stage IB, dead, 366 days
305.6
TCGA-60-2707-01A
0 years, male, stage:Stage IB, dead, 667 days
304.3
TCGA-85-8353-01A
0 years, male, white, stage:Stage IIIA, dead, 94 days
304.2
TCGA-21-1079-01A
0 years, male, white, stage:Stage IIIA, dead, 965 days
304.0
TCGA-66-2783-01A
0 years, male, stage:Stage IIIB, alive, 759 days
300.9
TCGA-98-7454-01A
0 years, male, white, stage:Stage IB, alive, 652 days
300.0
TCGA-77-8139-01A
0 years, male, stage:Stage IIB, alive, 3166 days
299.4
TCGA-66-2781-01A
0 years, male, stage:Stage IB, alive, 121 days
298.0
TCGA-46-6026-01A
0 years, male, white, stage:Stage IIB, alive, 423 days
296.4
TCGA-60-2697-01A
0 years, male, white, stage:Stage IIA, dead, 372 days
295.5
TCGA-85-A50M-01A
0 years, male, asian, stage:Stage IIA, dead, 826 days
293.8
TCGA-85-6561-01A
0 years, male, white, stage:Stage IB, alive, 1224 days
293.2
TCGA-66-2744-01A
0 years, male, stage:Stage IIB, alive, 30 days
292.3
TCGA-18-5592-01A
0 years, male, stage:Stage IIB, alive, 1519 days
291.2
TCGA-56-8308-01A
0 years, male, white, stage:Stage IIB, alive, 517 days
290.8
TCGA-66-2765-01A
0 years, male, stage:Stage IB, alive, 61 days
290.2
TCGA-77-8145-01A
0 years, male, stage:Stage IIIB, dead, 212 days
289.2
TCGA-77-8009-01A
0 years, male, stage:Stage IIB, dead, 1695 days
287.9
TCGA-56-A4BX-01A
0 years, male, white, stage:Stage IIA, alive, 405 days
287.8
TCGA-22-4596-01A
0 years, female, white, stage:Stage IB, dead, 17 days
286.5
TCGA-18-3408-01A
0 years, female, white, stage:Stage IB, dead, 2304 days
285.6
TCGA-22-4609-01A
0 years, male, white, stage:Stage IA, dead, 291 days
283.5
TCGA-66-2737-01A
0 years, male, stage:Stage IIB, alive, 61 days
280.7
TCGA-98-A53C-01A
0 years, female, white, stage:Stage IA, alive, 822 days
278.8
TCGA-85-8582-01A
0 years, male, white, stage:Stage IA, alive, 1160 days
278.6
TCGA-43-6771-01A
0 years, male, white, stage:Stage IB, dead, 166 days
277.4
TCGA-98-A53I-01A
0 years, male, white, stage:Stage IIA, alive, 565 days
274.7
TCGA-43-2581-01A
0 years, female, white, stage:Stage IIIA, alive, 1176 days
273.8
TCGA-85-8287-01A
0 years, male, white, stage:Stage IA, dead, 23 days
269.6
TCGA-98-A53B-01A
0 years, male, white, stage:Stage IB, dead, 61 days
268.6
TCGA-56-6545-01A
0 years, female, white, stage:Stage IB, alive, 666 days
268.3
TCGA-22-1000-01A
0 years, male, white, stage:Stage IB, dead, 454 days
268.1
TCGA-18-3411-01A
0 years, female, stage:Stage IIIA, alive, 3576 days
265.3
TCGA-66-2767-01A
0 years, male, stage:Stage IIIB, alive, 61 days
264.2
TCGA-43-8118-01A
0 years, female, white, stage:Stage IA, dead, 89 days
262.4
TCGA-O2-A52S-01A
0 years, female, white, stage:Stage III, dead, 387 days
260.2
TCGA-33-4547-01A
0 years, male, white, stage:Stage IB, alive, 2419 days
259.7
TCGA-39-5022-01A
0 years, male, white, stage:Stage IB, dead, 1679 days
255.7
TCGA-43-A56U-01A
0 years, female, white, stage:Stage IA, alive, 432 days
254.9
TCGA-46-3766-01A
0 years, female, white, stage:Stage IA, alive, 370 days
254.7
TCGA-22-1011-01A
0 years, male, white, stage:Stage IB, dead, 53 days
252.3
TCGA-60-2704-01A
0 years, male, white, stage:Stage IIB, dead, 1154 days
246.9
TCGA-63-7022-01A
female, stage:Stage IA, alive, 2073 days
245.9
TCGA-77-6845-01A
0 years, male, white, stage:Stage IIB, dead, 708 days
242.9
TCGA-56-8625-01A
0 years, female, white, stage:Stage IIIA, dead, 315 days
242.4
TCGA-63-A5MN-01A
0 years, female, stage:Stage IIB, dead, 345 days
241.1
TCGA-85-6560-01A
0 years, male, white, stage:Stage IIA, alive, 1259 days
239.6
TCGA-39-5030-01A
0 years, female, asian, stage:Stage IIIA, dead, 59 days
239.2
TCGA-37-4133-01A
0 years, male, white, stage:Stage IIIA, alive, 238 days
235.5
TCGA-56-8083-01A
0 years, male, white, stage:Stage IB, alive, 150 days
233.9
TCGA-43-8115-01A
0 years, female, white, stage:Stage IIA, alive, 407 days
231.3
TCGA-22-4594-01A
0 years, female, stage:Stage IIIA, dead, 1470 days
227.7
TCGA-22-5489-01A
0 years, male, white, stage:Stage IA, dead, 1912 days
221.1
TCGA-60-2711-01A
0 years, female, white, stage:Stage IB, alive, 1260 days
218.3
TCGA-43-6773-01A
0 years, male, white, stage:Stage IIB, dead, 116 days
213.3
TCGA-60-2712-01A
0 years, female, white, stage:Stage IIB, dead, 274 days
212.8
TCGA-22-1005-01A
0 years, male, white, stage:Stage IA, dead, 1953 days
205.5
TCGA-90-A4ED-01A
0 years, male, white, stage:Stage IB, alive, 615 days
197.0
TCGA-92-8064-01A
0 years, male, white, stage:'--, alive, 160 days
194.0
TCGA-22-4604-01A
0 years, male, white, stage:Stage IIA, dead, 399 days
184.3
TCGA-33-4533-01A
0 years, female, black or african american, stage:Stage IB, alive, 4068 days
183.7
TCGA-70-6723-01A
0 years, male, asian, stage:Stage IIA, alive, 375 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5ME is not prognostic in Lung Squamous Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
217.8
Number of samples
68
Samples
Sample
Description
TPM
L857
0 years, male, stage:Stage IB, dead, 226 days
643.6
L658
0 years, female, stage:Stage IIB, alive, 2083 days
563.0
L496
0 years, male, stage:Stage IB, alive, 2761 days
502.1
L818
0 years, male, stage:Stage IB, alive, 2480 days
499.3
L719
0 years, male, stage:Stage IB, alive, 1615 days
388.0
L559
0 years, male, stage:Stage IIB, alive, 2615 days
369.0
L539
0 years, male, stage:Stage IB, dead, 370 days
364.2
L568
0 years, female, stage:Stage IIB, dead, 71 days
323.6
L483
0 years, male, stage:Stage IB, dead, 77 days
318.6
L860
0 years, male, stage:Stage IA, alive, 2056 days
293.8
L464
0 years, male, stage:Stage IB, dead, 1935 days
288.3
L633
0 years, female, stage:Stage IA, alive, 2102 days
275.5
L444
0 years, female, stage:Stage IIB, alive, 3337 days
275.0
L767
0 years, male, stage:Stage IA, alive, 1718 days
273.0
L529
0 years, female, stage:Stage IA, alive, 2775 days
271.0
L459
0 years, male, stage:Stage IIA, alive, 3181 days
266.7
L466
0 years, female, stage:Stage IIIA, dead, 412 days
262.2
L488
0 years, female, stage:Stage IIA, alive, 2993 days
255.4
L712
0 years, male, stage:Stage IA, alive, 1698 days
249.1
L534
0 years, male, stage:Stage IIA, alive, 2693 days
248.2
L452
0 years, male, stage:Stage IIIA, dead, 3115 days
247.6
L886
0 years, male, stage:Stage IB, dead, 1932 days
241.3
L747
0 years, female, stage:Stage IA, dead, 1112 days
233.5
L447
0 years, male, stage:Stage IIB, alive, 3203 days
228.3
L420
0 years, female, stage:Stage IIB, dead, 295 days
227.8
L650
0 years, female, stage:Stage IB, dead, 986 days
224.2
L881
0 years, male, stage:Stage IB, alive, 1752 days
213.3
L608
0 years, male, stage:Stage IA, alive, 2350 days
212.4
L586
0 years, male, stage:Stage IIA, dead, 784 days
210.1
L788
0 years, female, stage:Stage IA, alive, 3385 days
209.4
L642
0 years, male, stage:Stage IB, dead, 1167 days
207.0
L852
0 years, male, stage:Stage IB, dead, 700 days
204.2
L604
0 years, male, stage:Stage IIA, dead, 286 days
199.6
L755
0 years, male, stage:Stage IIA, dead, 227 days
198.5
L457
0 years, female, stage:Stage IIA, alive, 2901 days
193.9
L858
0 years, female, stage:Stage IIB, dead, 558 days
193.8
L723
0 years, male, stage:Stage IIA, dead, 433 days
186.6
L472
0 years, male, stage:Stage IB, dead, 423 days
183.9
L644
0 years, male, stage:Stage IA, dead, 282 days
183.6
L744
0 years, male, stage:Stage IA, alive, 1614 days
183.6
L406
0 years, male, stage:Stage IA, alive, 3057 days
182.6
L563
0 years, female, stage:Stage IIB, dead, 1216 days
177.0
L854
0 years, female, stage:Stage IB, alive, 2256 days
171.1
L592
0 years, male, stage:Stage IB, alive, 2368 days
165.4
L817
0 years, female, stage:Stage IIIA, dead, 1279 days
158.7
L758
0 years, male, stage:Stage IA, dead, 1562 days
156.1
L739
0 years, female, stage:Stage IIIA, dead, 352 days
152.9
L442
0 years, female, stage:Stage IB, dead, 2433 days
150.0
L820
0 years, female, stage:Stage IA, alive, 2405 days
149.6
L824
0 years, male, stage:Stage IA, dead, 665 days
149.5
L470
0 years, female, stage:Stage IB, dead, 1774 days
149.1
L661
0 years, male, stage:Stage IA, dead, 1123 days
147.8
L685
0 years, female, stage:Stage IIB, alive, 1944 days
147.3
L856
0 years, male, stage:Stage IA, dead, 1465 days
143.3
L456
0 years, male, stage:Stage IIA, dead, 1660 days
141.8
L756
0 years, male, stage:Stage IB, alive, 1796 days
128.3
L468
0 years, male, stage:Stage IB, alive, 3004 days
124.0
L655
0 years, male, stage:Stage IIA, dead, 1603 days
118.7
L490
0 years, male, stage:Stage IA, dead, 716 days
113.8
L753
0 years, male, stage:Stage IIA, alive, 1705 days
110.0
L864
0 years, female, stage:Stage IA, alive, 2192 days
107.5
L652
0 years, male, stage:Stage IA, dead, 5 days
104.0
L715
0 years, female, stage:Stage IIIA, dead, 150 days
102.6
L736
0 years, male, stage:Stage IA, dead, 1195 days
102.4
L751
0 years, female, stage:Stage IIIA, alive, 1600 days
92.7
L884
0 years, male, stage:Stage IIA, alive, 1627 days
92.0
L572
0 years, male, stage:Stage IA, alive, 2532 days
84.1
L760
0 years, male, stage:Stage IIA, alive, 1895 days
77.5
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
213
Samples
Sample ID
Sample type
nRPX
CPT0125830003
Normal
0.9
CPT0067450003
Tumor
0.7
CPT0090900004
Normal
0.7
CPT0066930003
Normal
0.6
CPT0092930003
Tumor
0.6
CPT0008420003
Normal
0.6
CPT0001800013
Tumor
0.5
CPT0147400003
Normal
0.5
CPT0118880003
Tumor
0.5
CPT0106100003
Normal
0.5
CPT0001810003
Normal
0.5
CPT0090370003
Normal
0.5
CPT0105330003
Tumor
0.5
CPT0001690003
Normal
0.5
CPT0000920017
Tumor
0.4
CPT0011750003
Normal
0.4
CPT0118010003
Normal
0.4
CPT0067250003
Tumor
0.4
CPT0089360003
Normal
0.4
CPT0113990003
Tumor
0.4
CPT0118830003
Normal
0.4
CPT0082850004
Tumor
0.4
CPT0102480003
Normal
0.4
CPT0146680004
Tumor
0.3
CPT0118890003
Normal
0.3
CPT0067620003
Tumor
0.3
CPT0117970003
Tumor
0.3
CPT0109830004
Tumor
0.3
CPT0068100003
Tumor
0.3
CPT0113210003
Tumor
0.3
CPT0001960003
Tumor
0.3
CPT0118340003
Tumor
0.3
CPT0079830003
Tumor
0.3
CPT0091870003
Normal
0.3
CPT0008450003
Tumor
0.3
CPT0011930003
Normal
0.3
CPT0105600003
Tumor
0.3
CPT0023320003
Normal
0.3
CPT0069360003
Tumor
0.3
CPT0146880004
Tumor
0.2
CPT0079850003
Normal
0.2
CPT0148200003
Normal
0.2
CPT0105610003
Normal
0.2
CPT0068830003
Normal
0.2
CPT0105010004
Normal
0.2
CPT0021490003
Normal
0.2
CPT0090720003
Normal
0.2
CPT0097580003
Tumor
0.2
CPT0067470004
Normal
0.2
CPT0112080003
Normal
0.2
CPT0109700003
Normal
0.2
CPT0068800003
Tumor
0.2
CPT0067770003
Normal
0.2
CPT0118650003
Normal
0.2
CPT0066780003
Tumor
0.2
CPT0083810003
Normal
0.2
CPT0105270003
Tumor
0.2
CPT0090700003
Tumor
0.1
CPT0147480004
Tumor
0.1
CPT0069720003
Normal
0.1
CPT0014930003
Normal
0.1
CPT0090600003
Normal
0.1
CPT0110980004
Tumor
0.1
CPT0083780003
Tumor
0.1
CPT0091260003
Normal
0.1
CPT0110890003
Normal
0.1
CPT0148300003
Normal
0.1
CPT0112060003
Tumor
0.1
CPT0147880004
Tumor
0.1
CPT0114880003
Normal
0.1
CPT0090570004
Tumor
0.1
CPT0104630003
Tumor
0.1
CPT0092940003
Normal
0.1
CPT0089340003
Tumor
0.1
CPT0001060010
Tumor
0.1
CPT0147000003
Normal
0.1
CPT0109760003
Normal
0.1
CPT0090170004
Tumor
0.1
CPT0118180003
Normal
0.1
CPT0062810003
Normal
0.1
CPT0105680003
Normal
0.1
CPT0114010003
Normal
0.1
CPT0115090003
Normal
0.1
CPT0147080004
Tumor
0.1
CPT0068130003
Normal
0.1
CPT0086750003
Tumor
0.1
CPT0053040004
Tumor
0.1
CPT0000930003
Normal
0.1
CPT0111590003
Normal
0.1
CPT0118360003
Normal
0.1
CPT0069520003
Tumor
0.1
CPT0118570003
Tumor
0.1
CPT0146800003
Normal
0.1
CPT0086770003
Normal
0.0
CPT0067950003
Normal
0.0
CPT0090200003
Normal
0.0
CPT0146980004
Tumor
0.0
CPT0146600003
Normal
0.0
CPT0069370003
Normal
0.0
CPT0021450003
Tumor
0.0
CPT0082890003
Normal
0.0
CPT0148280004
Tumor
0.0
CPT0118160003
Tumor
0.0
CPT0105940003
Tumor
0.0
CPT0105370004
Normal
0.0
CPT0105230003
Tumor
0.0
CPT0105190003
Normal
0.0
CPT0013600003
Tumor
0.0
CPT0001970003
Normal
0.0
CPT0104650003
Normal
0.0
CPT0110860004
Tumor
0.0
CPT0105510003
Tumor
0.0
CPT0111480003
Normal
0.0
CPT0014290003
Normal
0.0
CPT0092530003
Tumor
0.0
CPT0001580009
Tumor
0.0
CPT0109740004
Tumor
0.0
CPT0083420003
Normal
0.0
CPT0068610003
Tumor
0.0
CPT0023310003
Tumor
0.0
CPT0067110003
Normal
0.0
CPT0109680004
Tumor
0.0
CPT0090860003
Tumor
0.0
CPT0114690003
Normal
0.0
CPT0070060003
Tumor
0.0
CPT0147980004
Tumor
0.0
CPT0114840003
Tumor
0.0
CPT0148100003
Normal
0.0
CPT0118200003
Tumor
0.0
CPT0067290003
Normal
0.0
CPT0015420003
Normal
0.0
CPT0001390003
Normal
-0.1
CPT0015410003
Tumor
-0.1
CPT0105550003
Normal
-0.1
CPT0105710003
Tumor
-0.1
CPT0146700003
Normal
-0.1
CPT0008410003
Tumor
-0.1
CPT0090340003
Tumor
-0.1
CPT0113220003
Normal
-0.1
CPT0148000003
Normal
-0.1
CPT0097600003
Normal
-0.1
CPT0082740004
Tumor
-0.1
CPT0070080003
Normal
-0.1
CPT0082770003
Normal
-0.1
CPT0115070003
Tumor
-0.1
CPT0118240003
Normal
-0.1
CPT0105980003
Normal
-0.1
CPT0055100004
Tumor
-0.1
CPT0063810003
Tumor
-0.1
CPT0067940003
Tumor
-0.1
CPT0148180004
Tumor
-0.1
CPT0001660013
Tumor
-0.1
CPT0109850003
Normal
-0.1
CPT0013880003
Tumor
-0.1
CPT0146780004
Tumor
-0.1
CPT0001380003
Tumor
-0.1
CPT0001590003
Normal
-0.1
CPT0147380004
Tumor
-0.1
CPT0092240003
Tumor
-0.1
CPT0083390004
Tumor
-0.1
CPT0083140003
Normal
-0.1
CPT0106110003
Tumor
-0.1
CPT0069700003
Tumor
-0.1
CPT0147100003
Normal
-0.1
CPT0109710003
Normal
-0.1
CPT0013630003
Normal
-0.1
CPT0104970003
Tumor
-0.1
CPT0147600003
Normal
-0.2
CPT0104750003
Tumor
-0.2
CPT0086320003
Normal
-0.2
CPT0118620003
Tumor
-0.2
CPT0069550003
Normal
-0.2
CPT0118810003
Tumor
-0.2
CPT0125810003
Tumor
-0.2
CPT0066810003
Normal
-0.2
CPT0084170003
Normal
-0.2
CPT0104760003
Normal
-0.2
CPT0084140003
Tumor
-0.2
CPT0118600003
Normal
-0.2
CPT0105250003
Normal
-0.2
CPT0086310003
Tumor
-0.2
CPT0063840003
Normal
-0.2
CPT0083100003
Tumor
-0.2
CPT0091240003
Tumor
-0.2
CPT0066890003
Tumor
-0.2
CPT0063750003
Normal
-0.2
CPT0105740003
Normal
-0.3
CPT0013910003
Normal
-0.3
CPT0147580004
Tumor
-0.3
CPT0051690004
Tumor
-0.3
CPT0111300003
Tumor
-0.3
CPT0092250003
Normal
-0.3
CPT0067070003
Tumor
-0.3
CPT0014260003
Tumor
-0.3
CPT0147500003
Normal
-0.3
CPT0001070003
Normal
-0.3
CPT0109720004
Tumor
-0.3
CPT0105630003
Tumor
-0.4
CPT0052170004
Tumor
-0.4
CPT0147900003
Normal
-0.4
CPT0014860003
Tumor
-0.4
CPT0102450003
Tumor
-0.4
CPT0105060003
Tumor
-0.4
CPT0114660004
Tumor
-0.4
CPT0011710004
Tumor
-0.5
CPT0068650003
Normal
-0.5
CPT0063730003
Tumor
-0.5
CPT0091860003
Tumor
-0.5
CPT0098130003
Tumor
-0.6
CPT0011910004
Tumor
-0.6
CPT0052940004
Tumor
-0.7
CPT0146580004
Tumor
N/A
CPT0148080004
Tumor
N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
212
Samples
Sample ID
Sample type
nRPX
CPT0147680004
Tumor
0.7
CPT0217420003
Tumor
0.7
CPT0010050003
Tumor
0.7
CPT0222730003
Tumor
0.6
CPT0234930004
Tumor
0.6
CPT0197210003
Tumor
0.6
CPT0204800003
Tumor
0.6
CPT0175120003
Tumor
0.6
CPT0197170003
Normal
0.5
CPT0183250004
Tumor
0.5
CPT0202580004
Normal
0.5
CPT0083980003
Tumor
0.5
CPT0202350004
Tumor
0.5
CPT0234790003
Tumor
0.5
CPT0112720003
Tumor
0.5
CPT0146480004
Tumor
0.5
CPT0191860003
Tumor
0.5
CPT0068280003
Tumor
0.5
CPT0233330003
Normal
0.5
CPT0234950004
Normal
0.4
CPT0202020008
Tumor
0.4
CPT0208770003
Tumor
0.4
CPT0237060004
Tumor
0.4
CPT0123370003
Normal
0.4
CPT0083990003
Normal
0.4
CPT0237760003
Tumor
0.4
CPT0227070003
Normal
0.3
CPT0237550004
Tumor
0.3
CPT0209490003
Tumor
0.3
CPT0237410004
Tumor
0.3
CPT0245830003
Tumor
0.3
CPT0105420003
Tumor
0.3
CPT0225380003
Tumor
0.3
CPT0023470003
Tumor
0.3
CPT0175160003
Normal
0.3
CPT0087210003
Normal
0.3
CPT0233120003
Tumor
0.3
CPT0227400003
Tumor
0.3
CPT0111000004
Normal
0.3
CPT0104360003
Tumor
0.3
CPT0146380004
Tumor
0.3
CPT0190550003
Tumor
0.3
CPT0115860003
Normal
0.3
CPT0079050003
Tumor
0.3
CPT0130410003
Tumor
0.2
CPT0208780003
Normal
0.2
CPT0068320003
Normal
0.2
CPT0126830003
Normal
0.2
CPT0204990003
Tumor
0.2
CPT0187370003
Tumor
0.2
CPT0183270003
Normal
0.2
CPT0069890003
Tumor
0.2
CPT0126670003
Tumor
0.2
CPT0195520003
Normal
0.2
CPT0063500003
Normal
0.2
CPT0023500003
Normal
0.2
CPT0136660003
Normal
0.2
CPT0202400004
Normal
0.2
CPT0128890003
Tumor
0.2
CPT0186140003
Normal
0.2
CPT0195510003
Tumor
0.2
CPT0087190003
Tumor
0.2
CPT0245840003
Normal
0.2
CPT0237690004
Tumor
0.1
CPT0175260003
Tumor
0.1
CPT0197090003
Tumor
0.1
CPT0223790003
Tumor
0.1
CPT0237970004
Tumor
0.1
CPT0112730003
Normal
0.1
CPT0098770003
Tumor
0.1
CPT0196810003
Tumor
0.1
CPT0237990003
Normal
0.1
CPT0245780003
Tumor
0.1
CPT0197380003
Normal
0.1
CPT0191710003
Tumor
0.1
CPT0192590004
Normal
0.1
CPT0175390003
Tumor
0.1
CPT0104930003
Tumor
0.1
CPT0098800003
Normal
0.1
CPT0130440004
Normal
0.1
CPT0197480003
Tumor
0.1
CPT0123350003
Tumor
0.1
CPT0102790003
Tumor
0.1
CPT0209510003
Normal
0.1
CPT0238110004
Tumor
0.1
CPT0102840003
Normal
0.1
CPT0232670003
Tumor
0.1
CPT0245890003
Normal
0.1
CPT0222740003
Normal
0.1
CPT0063440003
Normal
0.1
CPT0130310003
Normal
0.1
CPT0136640003
Tumor
0.1
CPT0245880003
Tumor
0.1
CPT0126390003
Tumor
0.1
CPT0130030003
Tumor
0.1
CPT0232690003
Normal
0.1
CPT0225470003
Normal
0.1
CPT0089880003
Tumor
0.1
CPT0126810003
Tumor
0.1
CPT0112580003
Tumor
0.1
CPT0233320003
Tumor
0.1
CPT0126530003
Tumor
0.0
CPT0007760003
Normal
0.0
CPT0112660003
Normal
0.0
CPT0101130003
Tumor
0.0
CPT0234820003
Normal
0.0
CPT0205000003
Normal
0.0
CPT0079100003
Tumor
0.0
CPT0111150004
Tumor
0.0
CPT0197740003
Tumor
0.0
CPT0105430003
Normal
0.0
CPT0202530004
Tumor
0.0
CPT0237710003
Normal
0.0
CPT0112540003
Tumor
0.0
CPT0104950003
Normal
0.0
CPT0234560003
Tumor
0.0
CPT0001020003
Tumor
0.0
CPT0227420003
Normal
0.0
CPT0204820003
Normal
0.0
CPT0079060003
Normal
0.0
CPT0237570003
Normal
0.0
CPT0227020003
Tumor
0.0
CPT0221660003
Normal
0.0
CPT0126760003
Normal
0.0
CPT0191930003
Normal
0.0
CPT0217490003
Normal
0.0
CPT0126450003
Tumor
0.0
CPT0233600003
Tumor
0.0
CPT0237780003
Normal
0.0
CPT0221220003
Normal
0.0
CPT0233640003
Normal
0.0
CPT0241210003
Normal
0.0
CPT0069900003
Normal
0.0
CPT0197520003
Normal
0.0
CPT0007740003
Tumor
0.0
CPT0147200003
Normal
0.0
CPT0238130003
Normal
0.0
CPT0219390003
Normal
0.0
CPT0196820003
Normal
0.0
CPT0187380003
Normal
0.0
CPT0237080003
Normal
0.0
CPT0091050003
Tumor
0.0
CPT0090440003
Tumor
0.0
CPT0191750003
Normal
-0.1
CPT0108560003
Tumor
-0.1
CPT0197150003
Tumor
-0.1
CPT0237430003
Normal
-0.1
CPT0091620003
Normal
-0.1
CPT0091090003
Normal
-0.1
CPT0192540004
Tumor
-0.1
CPT0233160003
Normal
-0.1
CPT0064050003
Normal
-0.1
CPT0064040003
Tumor
-0.1
CPT0202170003
Tumor
-0.1
CPT0204600003
Tumor
-0.1
CPT0237200004
Tumor
-0.1
CPT0223820003
Normal
-0.1
CPT0202040003
Normal
-0.1
CPT0241170003
Tumor
-0.1
CPT0130070003
Normal
-0.1
CPT0086260003
Tumor
-0.1
CPT0186210003
Normal
-0.1
CPT0175410003
Normal
-0.1
CPT0218280003
Tumor
-0.1
CPT0115830003
Tumor
-0.1
CPT0197100003
Normal
-0.1
CPT0175270003
Normal
-0.1
CPT0237210003
Normal
-0.1
CPT0147180004
Tumor
-0.1
CPT0218310003
Normal
-0.1
CPT0146400003
Normal
-0.1
CPT0063480003
Tumor
-0.1
CPT0209020004
Tumor
-0.2
CPT0091820003
Tumor
-0.2
CPT0175560003
Tumor
-0.2
CPT0126740003
Tumor
-0.2
CPT0202220004
Normal
-0.2
CPT0104380003
Normal
-0.2
CPT0146500003
Normal
-0.2
CPT0117720003
Tumor
-0.2
CPT0117770003
Normal
-0.2
CPT0186130003
Tumor
-0.2
CPT0086270003
Normal
-0.2
CPT0234580003
Normal
-0.2
CPT0204660003
Normal
-0.2
CPT0147700003
Normal
-0.2
CPT0186180003
Tumor
-0.2
CPT0130270003
Tumor
-0.2
CPT0128900003
Normal
-0.2
CPT0202740003
Normal
-0.2
CPT0221200003
Tumor
-0.2
CPT0209040003
Normal
-0.2
CPT0197860003
Normal
-0.2
CPT0001030003
Normal
-0.2
CPT0010060003
Normal
-0.2
CPT0245790003
Normal
-0.2
CPT0221650003
Tumor
-0.2
CPT0207250003
Normal
-0.2
CPT0108600003
Normal
-0.3
CPT0079110003
Normal
-0.3
CPT0112550003
Normal
-0.3
CPT0126400003
Normal
-0.3
CPT0207210003
Tumor
-0.3
CPT0091610003
Tumor
-0.3
CPT0236420003
Tumor
-0.3
CPT0236430003
Normal
-0.5
CPT0112600003
Normal
-0.5
CPT0202720003
Tumor
-0.5
CPT0219360003
Tumor
-0.6
CPT0112650003
Tumor
-0.6
CPT0126470003
Normal
-0.6
CPT0063430003
Tumor
-0.7
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LUNG CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.