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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPM4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
422.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
222.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
169.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
134.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
82.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
60.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
59.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
56.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
51.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
49.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
49.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
47.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
46.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
45.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
45.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
44.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
34.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
34.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
31.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
28.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
27.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
11.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPM4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
126.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
670.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
558.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
511.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
470.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
430.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
400.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
391.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
390.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
390.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
383.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
383.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
361.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
355.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
352.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
348.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
348.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
344.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
339.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
337.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
332.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
323.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
322.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
315.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
311.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
309.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
309.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
307.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
306.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
303.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
295.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
291.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
289.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
289.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
283.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
283.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
281.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
280.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
280.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
274.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
272.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
271.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
264.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
263.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
255.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
247.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
241.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
240.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
239.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
239.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
237.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
237.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
234.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
233.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
230.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
228.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
226.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
223.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
220.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
219.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
219.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
218.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
216.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
216.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
215.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
214.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
213.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
211.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
210.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
208.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
207.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
207.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
207.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
207.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
206.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
204.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
203.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
202.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
201.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
201.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
199.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
199.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
199.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
197.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
196.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
196.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
195.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
195.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
194.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
194.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
194.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
190.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
190.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
190.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
189.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
189.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
188.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
188.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
188.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
187.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
187.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
185.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
182.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
182.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
181.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
181.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
180.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
180.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
179.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
179.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
179.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
179.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
179.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
178.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
178.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
176.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
175.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
175.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
173.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
173.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
171.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
171.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
170.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
168.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
168.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
166.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
166.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
165.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
164.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
164.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
163.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
163.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
163.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
163.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
162.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
161.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
161.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
160.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
160.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
159.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
159.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
158.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
157.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
156.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
154.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
154.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
154.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
153.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
153.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
153.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
152.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
151.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
151.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
151.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
151.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
151.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
150.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
150.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
150.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
149.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
148.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
147.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
147.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
147.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
147.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
145.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
144.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
142.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
142.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
142.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
142.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
142.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
141.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
140.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
140.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
140.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
140.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
140.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
139.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
138.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
138.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
136.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
134.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
133.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
133.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
132.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
132.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
132.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
132.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
131.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
131.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
131.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
130.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
130.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
130.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
130.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
130.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
129.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
128.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
128.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
128.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
128.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
128.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
128.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
128.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
128.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
126.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
126.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
126.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
125.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
124.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
124.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
124.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
124.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
123.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
123.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
123.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
123.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
122.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
121.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
121.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
120.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
120.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
120.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
120.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
120.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
120.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
119.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
119.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
118.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
118.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
118.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
118.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
117.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
117.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
117.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
116.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
116.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
115.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
114.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
113.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
113.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
112.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
112.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
112.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
111.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
110.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
110.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
110.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
110.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
109.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
109.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
109.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
108.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
108.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
108.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
108.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
108.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
108.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
106.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
106.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
105.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
105.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
105.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
105.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
105.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
105.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
104.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
104.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
104.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
104.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
104.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
104.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
103.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
103.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
103.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
102.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
101.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
101.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
101.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
101.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
100.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
98.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
98.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
98.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
98.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
97.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
97.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
97.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
97.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
97.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
97.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
96.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
96.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
96.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
96.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
96.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
96.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
95.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
95.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
95.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
95.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
94.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
94.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
94.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
94.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
93.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
92.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
92.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
92.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
92.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
92.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
92.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
92.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
91.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
91.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
91.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
90.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
90.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
90.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
89.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
89.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
89.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
88.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
88.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
87.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
87.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
87.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
86.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
86.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
86.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
85.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
85.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
85.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
85.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
84.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
84.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
84.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
84.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
83.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
83.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
83.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
83.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
81.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
80.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
80.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
80.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
80.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
80.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
80.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
80.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
80.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
80.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
79.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
79.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
79.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
78.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
78.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
78.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
78.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
78.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
77.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
77.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
76.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
76.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
76.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
76.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
76.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
75.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
75.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
74.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
74.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
74.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
73.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
73.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
73.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
72.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
72.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
72.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
72.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
72.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
71.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
71.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
70.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
70.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
70.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
70.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
69.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
69.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
69.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
69.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
69.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
69.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
69.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
68.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
68.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
68.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
67.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
66.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
66.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
65.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
64.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
64.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
63.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
63.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
61.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
61.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
61.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
61.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
60.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
60.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
60.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
59.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
58.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
57.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
57.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
57.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
56.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
56.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
56.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
56.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
56.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
56.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
56.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
55.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
55.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
54.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
53.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
52.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
52.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
52.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
52.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
51.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
50.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
50.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
50.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
49.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
47.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
47.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
47.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
45.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
44.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
43.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
43.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
43.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
42.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
40.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
40.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
39.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
38.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
38.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
37.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
37.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
36.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
36.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
36.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
36.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
36.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
34.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
34.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
33.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
33.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
32.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
32.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
31.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
29.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
23.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
22.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
19.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
18.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPM4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
157.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
670.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
661.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
594.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
459.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
386.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
368.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
336.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
227.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
225.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
212.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
208.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
207.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
206.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
203.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
199.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
197.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
196.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
191.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
189.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
189.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
189.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
188.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
184.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
183.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
182.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
181.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
177.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
173.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
173.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
173.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
166.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
164.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
158.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
157.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
156.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
155.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
154.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
153.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
149.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
147.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
144.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
143.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
143.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
141.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
141.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
140.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
139.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
139.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
138.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
137.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
135.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
135.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
134.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
133.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
132.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
132.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
122.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
122.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
122.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
121.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
118.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
118.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
118.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
117.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
117.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
116.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
115.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
112.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
111.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
110.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
109.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
108.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
104.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
101.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
101.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
100.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
97.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
96.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
96.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
94.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
93.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
92.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
89.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
88.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
83.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
81.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
80.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
80.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
79.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
71.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
70.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
66.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
65.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
65.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
61.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
40.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
39.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPM4 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
373.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
293.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
283.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
237.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
234.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
230.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
226.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
214.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
210.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
204.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
192.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
180.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
175.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
166.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
159.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
154.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
151.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
151.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
150.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
150.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
148.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
145.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
144.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
144.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
143.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
142.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
138.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
130.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
130.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
129.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
129.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
125.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
125.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
124.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
122.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
106.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
104.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
102.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
101.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
97.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
96.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
95.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
94.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
94.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
93.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
93.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
92.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
89.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
88.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
88.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
88.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
87.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
83.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
82.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
82.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
81.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
81.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
80.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
80.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
79.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
78.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
77.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
76.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
76.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
75.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
75.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
75.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
73.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
73.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
72.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
72.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
70.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
70.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
68.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
66.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
65.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
65.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
65.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
64.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
64.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
63.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
63.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
63.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
62.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
61.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
60.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
59.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
59.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
59.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
58.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
58.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
58.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
57.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
57.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
57.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
56.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
55.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
54.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
53.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
52.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
51.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
50.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
49.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
49.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
49.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
47.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
47.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
47.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
46.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
46.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
46.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
46.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
45.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
45.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
43.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
42.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
42.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
41.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
41.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
41.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
40.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
39.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
39.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
39.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
39.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
38.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
38.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
37.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
37.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
36.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
36.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
36.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
36.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
35.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
35.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
35.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
34.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
34.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
33.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
33.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
31.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
30.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
28.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
28.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
25.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
23.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
21.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
21.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
20.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
20.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
15.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
14.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
5.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
3.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0066480003
Tumor
1.9
CPT0011240003
Tumor
1.8
CPT0075560003
Tumor
1.5
CPT0084560003
Tumor
1.4
CPT0010120001
Normal
1.2
CPT0079510001
Normal
1.2
CPT0024680001
Normal
1.0
CPT0092190003
Normal
1.0
CPT0025170003
Tumor
0.9
CPT0015910003
Tumor
0.8
CPT0088630003
Tumor
0.8
CPT0086870003
Tumor
0.8
CPT0001270001
Normal
0.8
CPT0084590001
Normal
0.8
CPT0002370001
Normal
0.7
CPT0086970003
Normal
0.7
CPT0021240003
Tumor
0.7
CPT0077490003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0077320001
Normal
0.6
CPT0081990003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0000660001
Normal
0.6
CPT0025290003
Tumor
0.6
CPT0081600003
Tumor
0.6
CPT0075720003
Tumor
0.5
CPT0020130001
Normal
0.5
CPT0012670003
Tumor
0.5
CPT0075170001
Normal
0.4
CPT0020120003
Tumor
0.4
CPT0007470001
Normal
0.4
CPT0075130003
Tumor
0.4
CPT0018250001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0086830003
Normal
0.4
CPT0014470001
Normal
0.4
CPT0066520001
Normal
0.4
CPT0019160001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0088760003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0086890003
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0085670003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0001230001
Normal
0.3
CPT0065870003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0012290003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0009020003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0012080003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0009080003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0078510003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0010110003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0023350003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0086950003
Tumor
-0.3
CPT0000790001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0079270003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0012370003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0079480003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0001340003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0064370003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0000870016
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0001540009
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0078830003
Tumor
-0.8
CPT0065810003
Tumor
-0.8
CPT0002270011
Tumor
-0.8
CPT0026410003
Tumor
-0.8
CPT0025050003
Tumor
-0.9
CPT0012550003
Tumor
-0.9
CPT0014450004
Tumor
-0.9
CPT0024670003
Tumor
-0.9
CPT0009000003
Tumor
-1.0
CPT0012180003
Tumor
-1.0
CPT0015730003
Tumor
-1.1
CPT0011410003
Tumor
-1.3
CPT0088970003
Tumor
-1.3
CPT0079180003
Tumor
-1.3
CPT0078800003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
