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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.6
nTPM
GTEx:
47.6
nTPM
FANTOM5:
85.8
Scaled Tags Per Million
Pig:
87.3
nTPM
Mouse:
161.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 47.6
Samples: 105
Max nTPM: 77.8
Min nTPM: 23.7
Std nTPM: 8.1
Median nTPM:
413_1
59 years, female
77.8
501_1
88 years, male
65.8
119_1
70 years, female
59.3
120_1
70 years, female
59.3
506_1
65 years, male
58.9
18_1
88 years, male
58.8
99_1
64 years, male
58.8
173_1
67 years, male
58.7
177_1
74 years, male
58.6
452_1
88 years, female
58.3
288_1
66 years, female
57.9
17_1
71 years, male
57.8
324_1
76 years, male
57.6
41_1
94 years, female
56.5
109_1
81 years, female
55.9
317_1
60 years, male
55.9
145_1
84 years, male
55.1
139_1
64 years, female
54.5
491_1
89 years, female
54.3
42_1
85 years, male
54.2
396_1
62 years, male
54.2
295_1
61 years, female
54.1
115_1
83 years, male
53.7
406_1
79 years, male
53.4
404_1
82 years, female
53.0
142_1
61 years, female
52.9
386_1
76 years, male
52.6
81_1
67 years, male
52.2
162_1
79 years, female
52.1
314_1
67 years, male
51.9
348_1
84 years, male
51.5
149_1
88 years, male
51.4
43_1
64 years, female
51.0
32_1
67 years, male
50.8
137_1
83 years, male
50.7
2_1
77 years, female
50.3
292_1
71 years, male
50.1
377_1
82 years, female
50.1
243_1
75 years, male
49.9
254_1
77 years, female
49.9
264_1
73 years, female
49.8
4_1
88 years, female
49.7
379_1
60 years, male
49.6
89_1
63 years, male
49.4
517_1
88 years, male
49.2
405_1
91 years, male
48.8
322_1
76 years, male
48.7
315_1
62 years, female
48.6
318_1
68 years, male
48.6
347_1
72 years, male
48.5
229_1
69 years, female
48.4
291_1
76 years, male
48.2
414_1
84 years, female
48.1
117_1
61 years, male
47.9
321_1
62 years, female
47.9
6_1
73 years, female
47.8
353_1
82 years, female
47.7
335_1
73 years, female
47.5
349_1
83 years, male
47.4
266_1
85 years, male
46.8
518_1
75 years, female
46.6
415_1
77 years, female
46.5
172_1
72 years, female
46.2
351_1
91 years, male
46.1
490_1
67 years, female
45.9
153_1
70 years, female
45.5
265_1
87 years, male
45.5
466_1
57 years, female
45.4
425_1
59 years, female
45.0
189_1
76 years, male
44.9
313_1
79 years, female
44.7
350_1
84 years, female
44.7
35_1
74 years, female
44.3
311_1
78 years, male
44.2
9_1
66 years, female
44.0
320_1
89 years, female
43.9
526_1
61 years, male
43.6
447_1
81 years, male
43.5
499_1
55 years, female
43.4
251_1
78 years, male
42.8
375_1
74 years, female
42.8
376_1
75 years, female
42.7
163_1
78 years, male
42.5
316_1
62 years, male
42.1
468_1
89 years, male
42.0
126_1
63 years, male
41.7
480_1
63 years, male
41.4
355_1
70 years, female
40.2
286_1
68 years, female
39.7
217_1
76 years, male
39.6
356_1
87 years, female
39.6
503_1
68 years, male
38.5
307_1
66 years, female
36.8
293_1
68 years, female
36.1
354_1
81 years, female
36.1
319_1
81 years, male
35.5
384_1
83 years, male
35.5
352_1
62 years, male
34.9
237_1
82 years, male
34.1
394_1
75 years, female
33.7
246_1
77 years, male
33.6
389_1
86 years, female
33.2
308_1
70 years, female
30.0
218_1
71 years, female
28.5
495_1
57 years, female
23.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
