HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:64.9 nTPM
HPA Brain:179.3 nTPM
GTEx:64.9 nTPM
FANTOM5:429.5 Scaled Tags Per Million
Pig:256.2 nTPM
Mouse:177.9 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016738Antibody HPA016739
Glial cells HighMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 179.3
Sample id Sample description nTPM
Hippocampus
nTPM: 139.8
2621 Female, age 67, right hemisphere 163.5
1855 Male, age 76, left hemisphere 163.1
1898 Male, age 80, left hemisphere 160.8
1911 Female, age 85, right hemisphere 129.8
2529 Female, age 94, left hemisphere 113.0
2148 Female, age 91, left hemisphere 108.7
Dentate gyrus
nTPM: 139.0
2010 Male, age 76, both hemispheres 162.1
2246 Female, age 85, both hemispheres 158.7
1927 Female, age 91, both hemispheres 144.5
2530 Female, age 94, left hemisphere 125.7
2528 Male, age 74, both hemispheres 122.1
2531 Female, age 67, both hemispheres 120.8
Entorhinal gyrus
nTPM: 143.0
1938 Female, age 85, left hemisphere 172.8
2764 Male, age 80, right hemisphere 152.9
2613 Female, age 94, left hemisphere 150.5
1787 Male, age 76, left hemisphere 150.3
2686 Male, age 75, right hemisphere 115.8
2117 Female, age 91, right hemisphere 115.6
Hippocampus, CA1
nTPM: 153.8
2749 Male, age 80, left hemisphere 205.6
1873 Female, age 85, both hemispheres 167.1
2045 Male, age 76, both hemispheres 150.5
2527 Male, age 74, both hemispheres 130.4
2082 Female, age 91, right hemisphere 115.1
Hippocampus, CA2
nTPM: 140.9
1892 Male, age 76, both hemispheres 178.5
1940 Female, age 85, left hemisphere 156.6
1963 Male, age 80, left hemisphere 140.4
2249 Male, age 74, both hemispheres 134.0
2437 Female, age 94, left hemisphere 121.7
2113 Female, age 91, right hemisphere 113.9
Hippocampus, CA3
nTPM: 146.2
2620 Female, age 94, left hemisphere 186.2
2137 Male, age 80, left hemisphere 177.0
1867 Male, age 76, both hemispheres 157.2
1891 Female, age 85, both hemispheres 136.9
2436 Male, age 74, both hemispheres 117.8
2861 Female, age 67, both hemispheres 102.1
Parahippocampal cortex
nTPM: 149.4
1850 Male, age 80, both hemispheres 191.4
1933 Female, age 85, both hemispheres 176.4
2532 Female, age 72, left hemisphere 173.2
2245 Female, age 91, both hemispheres 152.6
2693 Female, age 94, both hemispheres 145.5
2018 Male, age 76, both hemispheres 145.4
1990 Female, age 91, right hemisphere 133.9
2250 Female, age 67, right hemisphere 128.0
2692 Male, age 74, both hemispheres 125.1
2622 Female, age 67, right hemisphere 122.3
Perirhinal gyrus
nTPM: 179.3
1794 Male, age 80, right hemisphere 196.4
1841 Female, age 85, right hemisphere 190.5
1847 Female, age 91, left hemisphere 189.1
2521 Female, age 94, right hemisphere 165.5
2848 Male, age 76, right hemisphere 154.8
Subiculum
nTPM: 136.2
1977 Female, age 85, both hemispheres 157.4
1901 Male, age 80, both hemispheres 155.0
2042 Male, age 76, both hemispheres 146.3
2438 Female, age 94, left hemisphere 133.3
2619 Male, age 74, both hemispheres 130.1
2729 Female, age 91, right hemisphere 95.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 64.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.9
Samples: 197

Max nTPM: 106.6
Min nTPM: 30.6
Std nTPM: 14.8
Median nTPM: 63.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 106.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 103.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 99.5
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 97.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 97.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 95.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 94.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 94.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 94.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 93.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 92.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 429.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 429.5
FF:10169-103B7 60 years, female 579.5
FF:10153-102I9 76 years, female 279.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 256.2
Pig sample Sample description nTPM
Subiculum
nTPM: 249.3
Samples: 4

Max nTPM: 325.7
Min nTPM: 221.6
Sample A Female 325.7
Sample B Female 228.0
Sample C Male 221.9
Sample D Male 221.6
Dorsal hippocampus
nTPM: 239.4
Samples: 4

Max nTPM: 293.9
Min nTPM: 179.3
Sample A Female 293.9
Sample B Female 243.9
Sample C Male 240.5
Sample D Male 179.3
Entorhinal cortex
nTPM: 256.2
Samples: 4

Max nTPM: 284.7
Min nTPM: 226.7
Sample A Female 284.7
Sample B Female 226.7
Sample C Male 267.4
Sample D Male 245.9
Ventral hippocampus
nTPM: 229.7
Samples: 4

Max nTPM: 268.8
Min nTPM: 166.1
Sample A Female 231.4
Sample B Female 166.1
Sample C Male 268.8
Sample D Male 252.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 177.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 177.9
Samples: 4

Max nTPM: 208.4
Min nTPM: 163.6
Sample A Male 164.2
Sample B Male 175.2
Sample C Female 163.6
Sample D Female 208.4
Hippocampal formation
nTPM: 148.0
Samples: 4

Max nTPM: 152.2
Min nTPM: 145.9
Sample A Male 152.2
Sample B Male 148.0
Sample C Female 145.9
Sample D Female 146.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
659 Antisense, RP_040324_01_E10, Mouse strain C57BL/6J (56 days, male) 13.0
660 Antisense, RP_040324_01_E10, Mouse strain C57BL/6J (56 days, male) 10.9

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