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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
72.0
nTPM
HPA Brain:
92.7
nTPM
GTEx:
72.0
nTPM
FANTOM5:
125.4
Scaled Tags Per Million
Pig:
37.2
nTPM
Mouse:
32.3
nTPM
Allen mouse:
6.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
92.7
Sample id
Sample description
nTPM
Amygdala nTPM: 92.7
2514
Male, age 75, right hemisphere
108.2
2814
Male, age 76, right hemisphere
100.3
1987
Female, age 91, left hemisphere
92.7
2517
Female, age 94, left hemisphere
86.0
2695
Female, age 67, right hemisphere
76.5
Basal amygdala nTPM: 78.4
2609
Male, age 75, right hemisphere
98.1
2243
Female, age 91, right hemisphere
92.5
1955
Male, age 76, both hemispheres
92.1
2110
Male, age 80, left hemisphere
80.5
2685
Female, age 94, left hemisphere
73.1
2827
Female, age 67, right hemisphere
34.4
Central amygdala nTPM: 87.7
2701
Female, age 91, right hemisphere
97.0
1905
Male, age 76, both hemispheres
89.5
2515
Male, age 75, right hemisphere
88.6
2239
Male, age 80, left hemisphere
83.9
2826
Female, age 94, left hemisphere
79.6
Corticomedial amygdala nTPM: 80.7
2240
Male, age 76, both hemispheres
94.8
2242
Female, age 91, right hemisphere
94.4
2428
Male, age 75, right hemisphere
93.7
2829
Male, age 80, left hemisphere
82.1
2429
Female, age 94, left hemisphere
80.3
2535
Female, age 67, right hemisphere
39.1
Lateral amygdala nTPM: 76.9
2255
Female, age 91, right hemisphere
91.3
2516
Male, age 75, right hemisphere
90.8
1883
Male, age 76, both hemispheres
88.8
2256
Male, age 80, left hemisphere
77.4
2534
Female, age 94, left hemisphere
76.1
2830
Female, age 67, right hemisphere
37.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 72.0
Samples: 152
Max nTPM: 173.3
Min nTPM: 31.4
Std nTPM: 24.5
Median nTPM: 68.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
173.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
166.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
145.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
127.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
127.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
122.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
121.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
114.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
111.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
110.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
110.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
107.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
106.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
105.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
104.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
103.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
102.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
102.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
99.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
95.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
95.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
94.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
94.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
93.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
92.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
91.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
91.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
91.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
91.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
89.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
89.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
89.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
89.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
88.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
87.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
87.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
85.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
85.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
85.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
84.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
84.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
84.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
83.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
82.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
82.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
82.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
82.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
81.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
80.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
79.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
79.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
78.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
78.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
78.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
77.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
76.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
76.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
76.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
76.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
75.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
75.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
73.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
73.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
72.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
71.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
71.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
71.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
70.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
70.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
70.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
70.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
70.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
69.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
69.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
68.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
68.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
67.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
66.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
66.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
65.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
65.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
65.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
65.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
65.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
64.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
64.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
63.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
62.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
62.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
62.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
61.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
61.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
61.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
61.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
60.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
60.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
60.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
60.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
60.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
59.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
59.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
58.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
58.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
57.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
57.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
57.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
56.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
56.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
56.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
55.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
55.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
54.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
54.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
53.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
52.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
52.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
52.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
51.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
51.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
51.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
50.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
50.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
50.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
49.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
49.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
48.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
47.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
47.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
47.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
46.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
46.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
46.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
45.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
45.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
43.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
43.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
42.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
42.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
41.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
41.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
41.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
39.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
37.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
35.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
35.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
32.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
31.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
32.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 32.4
Samples: 4
Max nTPM: 36.7
Min nTPM: 29.0
Sample A
Male
31.7
Sample B
Male
29.0
Sample C
Female
36.7
Sample D
Female
32.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.