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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
77.1
nTPM
GTEx:
77.1
nTPM
FANTOM5:
81.0
Scaled Tags Per Million
Pig:
68.7
nTPM
Mouse:
135.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 77.1
Samples: 105
Max nTPM: 171.2
Min nTPM: 41.9
Std nTPM: 19.4
Median nTPM:
491_1
89 years, female
171.2
413_1
59 years, female
130.9
490_1
67 years, female
121.7
415_1
77 years, female
114.2
81_1
67 years, male
109.0
217_1
76 years, male
109.0
149_1
88 years, male
108.5
32_1
67 years, male
106.6
466_1
57 years, female
106.0
43_1
64 years, female
105.6
414_1
84 years, female
105.4
162_1
79 years, female
103.8
495_1
57 years, female
102.6
308_1
70 years, female
100.7
6_1
73 years, female
99.1
307_1
66 years, female
97.1
348_1
84 years, male
93.8
139_1
64 years, female
92.5
89_1
63 years, male
91.6
229_1
69 years, female
90.9
526_1
61 years, male
89.7
375_1
74 years, female
89.2
468_1
89 years, male
88.1
2_1
77 years, female
87.2
265_1
87 years, male
86.6
18_1
88 years, male
86.5
246_1
77 years, male
85.4
386_1
76 years, male
84.7
237_1
82 years, male
84.5
379_1
60 years, male
84.2
142_1
61 years, female
83.2
396_1
62 years, male
83.2
117_1
61 years, male
82.5
126_1
63 years, male
82.4
311_1
78 years, male
82.3
324_1
76 years, male
82.0
518_1
75 years, female
81.3
218_1
71 years, female
81.1
145_1
84 years, male
79.8
321_1
62 years, female
79.8
251_1
78 years, male
78.9
17_1
71 years, male
77.9
405_1
91 years, male
77.8
501_1
88 years, male
77.7
243_1
75 years, male
77.3
315_1
62 years, female
76.8
322_1
76 years, male
76.4
288_1
66 years, female
75.7
35_1
74 years, female
75.3
153_1
70 years, female
75.1
41_1
94 years, female
74.4
119_1
70 years, female
74.0
352_1
62 years, male
73.6
377_1
82 years, female
73.5
314_1
67 years, male
72.6
384_1
83 years, male
72.5
286_1
68 years, female
72.4
120_1
70 years, female
72.1
115_1
83 years, male
71.8
254_1
77 years, female
71.5
313_1
79 years, female
71.5
173_1
67 years, male
69.9
172_1
72 years, female
69.1
291_1
76 years, male
68.6
389_1
86 years, female
68.5
447_1
81 years, male
68.4
517_1
88 years, male
67.6
137_1
83 years, male
67.0
480_1
63 years, male
66.9
499_1
55 years, female
66.5
316_1
62 years, male
66.4
4_1
88 years, female
65.9
425_1
59 years, female
65.7
42_1
85 years, male
64.6
376_1
75 years, female
64.3
452_1
88 years, female
64.0
292_1
71 years, male
63.9
189_1
76 years, male
63.7
320_1
89 years, female
63.6
406_1
79 years, male
63.3
318_1
68 years, male
62.8
353_1
82 years, female
62.8
266_1
85 years, male
62.5
404_1
82 years, female
62.5
109_1
81 years, female
62.4
317_1
60 years, male
62.4
354_1
81 years, female
60.9
177_1
74 years, male
60.7
503_1
68 years, male
59.3
319_1
81 years, male
59.1
335_1
73 years, female
58.7
9_1
66 years, female
58.3
506_1
65 years, male
58.3
355_1
70 years, female
57.9
350_1
84 years, female
57.0
347_1
72 years, male
56.2
349_1
83 years, male
56.2
351_1
91 years, male
56.1
295_1
61 years, female
54.1
264_1
73 years, female
53.3
293_1
68 years, female
51.2
163_1
78 years, male
50.8
394_1
75 years, female
50.3
356_1
87 years, female
48.0
99_1
64 years, male
41.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
