HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.1 nTPM
HPA Brain:96.5 nTPM
GTEx:25.1 nTPM
FANTOM5:209.8 Scaled Tags Per Million
Pig:165.9 nTPM
Mouse:232.7 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027375Antibody HPA027380Antibody HPA027395
Glial cells Not detectedNot detectedLow
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 96.5
Sample id Sample description nTPM
Hippocampus
nTPM: 45.5
1898 Male, age 80, left hemisphere 75.9
2621 Female, age 67, right hemisphere 46.6
1911 Female, age 85, right hemisphere 39.3
1855 Male, age 76, left hemisphere 38.9
2529 Female, age 94, left hemisphere 36.8
2148 Female, age 91, left hemisphere 35.7
Dentate gyrus
nTPM: 42.7
1927 Female, age 91, both hemispheres 58.3
2010 Male, age 76, both hemispheres 44.8
2246 Female, age 85, both hemispheres 43.8
2528 Male, age 74, both hemispheres 40.5
2530 Female, age 94, left hemisphere 36.2
2531 Female, age 67, both hemispheres 32.8
Entorhinal gyrus
nTPM: 70.2
2764 Male, age 80, right hemisphere 83.9
1787 Male, age 76, left hemisphere 81.5
1938 Female, age 85, left hemisphere 78.2
2613 Female, age 94, left hemisphere 77.8
2686 Male, age 75, right hemisphere 56.4
2117 Female, age 91, right hemisphere 43.2
Hippocampus, CA1
nTPM: 47.2
2749 Male, age 80, left hemisphere 70.0
2527 Male, age 74, both hemispheres 48.5
1873 Female, age 85, both hemispheres 47.9
2082 Female, age 91, right hemisphere 38.4
2045 Male, age 76, both hemispheres 31.2
Hippocampus, CA2
nTPM: 55.6
1892 Male, age 76, both hemispheres 84.9
1940 Female, age 85, left hemisphere 62.6
1963 Male, age 80, left hemisphere 55.0
2437 Female, age 94, left hemisphere 48.4
2113 Female, age 91, right hemisphere 41.8
2249 Male, age 74, both hemispheres 41.1
Hippocampus, CA3
nTPM: 48.4
1867 Male, age 76, both hemispheres 63.9
2137 Male, age 80, left hemisphere 58.8
1891 Female, age 85, both hemispheres 56.0
2436 Male, age 74, both hemispheres 44.8
2861 Female, age 67, both hemispheres 36.2
2620 Female, age 94, left hemisphere 30.6
Parahippocampal cortex
nTPM: 75.5
1850 Male, age 80, both hemispheres 108.8
1990 Female, age 91, right hemisphere 100.5
2250 Female, age 67, right hemisphere 80.7
1933 Female, age 85, both hemispheres 79.1
2532 Female, age 72, left hemisphere 79.1
2693 Female, age 94, both hemispheres 73.3
2245 Female, age 91, both hemispheres 70.2
2622 Female, age 67, right hemisphere 60.5
2692 Male, age 74, both hemispheres 51.9
2018 Male, age 76, both hemispheres 51.4
Perirhinal gyrus
nTPM: 96.5
1847 Female, age 91, left hemisphere 124.5
1794 Male, age 80, right hemisphere 102.8
1841 Female, age 85, right hemisphere 94.1
2521 Female, age 94, right hemisphere 88.8
2848 Male, age 76, right hemisphere 72.2
Subiculum
nTPM: 57.4
1977 Female, age 85, both hemispheres 76.6
1901 Male, age 80, both hemispheres 72.5
2438 Female, age 94, left hemisphere 71.2
2619 Male, age 74, both hemispheres 53.6
2042 Male, age 76, both hemispheres 36.0
2729 Female, age 91, right hemisphere 34.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.1
Samples: 197

Max nTPM: 81.0
Min nTPM: 10.4
Std nTPM: 12.7
Median nTPM: 21.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 79.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 75.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 71.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 66.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 62.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 57.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 53.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 51.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 50.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 209.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 209.8
FF:10153-102I9 76 years, female 213.0
FF:10169-103B7 60 years, female 206.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 165.9
Pig sample Sample description nTPM
Subiculum
nTPM: 165.9
Samples: 4

Max nTPM: 207.2
Min nTPM: 151.7
Sample A Female 207.2
Sample B Female 151.7
Sample C Male 152.7
Sample D Male 152.1
Dorsal hippocampus
nTPM: 85.3
Samples: 4

Max nTPM: 123.8
Min nTPM: 52.0
Sample A Female 91.0
Sample B Female 74.5
Sample C Male 123.8
Sample D Male 52.0
Entorhinal cortex
nTPM: 95.9
Samples: 4

Max nTPM: 107.5
Min nTPM: 88.6
Sample A Female 88.6
Sample B Female 107.5
Sample C Male 93.4
Sample D Male 93.9
Ventral hippocampus
nTPM: 86.9
Samples: 4

Max nTPM: 110.5
Min nTPM: 72.4
Sample A Female 110.5
Sample B Female 72.4
Sample C Male 83.8
Sample D Male 80.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 232.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 232.7
Samples: 4

Max nTPM: 288.3
Min nTPM: 203.6
Sample A Male 203.6
Sample B Male 218.9
Sample C Female 220.1
Sample D Female 288.3
Hippocampal formation
nTPM: 170.9
Samples: 4

Max nTPM: 184.2
Min nTPM: 160.6
Sample A Male 184.2
Sample B Male 167.7
Sample C Female 160.6
Sample D Female 171.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
72129295 Antisense, RP_051017_03_F11, Mouse strain C57BL/6J (56 days, male) 8.1
69134487 Antisense, RP_050321_03_A05, Mouse strain C57BL/6J (56 days, male) 5.8

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