HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:67.1 nTPM
HPA Brain:44.0 nTPM
GTEx:67.1 nTPM
FANTOM5:48.0 Scaled Tags Per Million
Pig:64.7 nTPM
Mouse:52.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027641
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 44.0
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
1898 Male, age 80, left hemisphere 49.4
2529 Female, age 94, left hemisphere 42.5
2621 Female, age 67, right hemisphere 37.4
2148 Female, age 91, left hemisphere 36.1
1911 Female, age 85, right hemisphere 33.9
1855 Male, age 76, left hemisphere 32.6
Dentate gyrus
nTPM: 40.5
2530 Female, age 94, left hemisphere 50.2
2010 Male, age 76, both hemispheres 45.2
2528 Male, age 74, both hemispheres 40.7
1927 Female, age 91, both hemispheres 40.5
2246 Female, age 85, both hemispheres 35.9
2531 Female, age 67, both hemispheres 30.6
Entorhinal gyrus
nTPM: 39.0
2764 Male, age 80, right hemisphere 47.5
1787 Male, age 76, left hemisphere 44.0
1938 Female, age 85, left hemisphere 42.3
2117 Female, age 91, right hemisphere 35.7
2613 Female, age 94, left hemisphere 35.3
2686 Male, age 75, right hemisphere 29.3
Hippocampus, CA1
nTPM: 44.0
2749 Male, age 80, left hemisphere 60.1
2527 Male, age 74, both hemispheres 43.5
1873 Female, age 85, both hemispheres 39.7
2082 Female, age 91, right hemisphere 38.6
2045 Male, age 76, both hemispheres 38.0
Hippocampus, CA2
nTPM: 41.3
1963 Male, age 80, left hemisphere 47.5
2249 Male, age 74, both hemispheres 46.9
1892 Male, age 76, both hemispheres 41.4
2437 Female, age 94, left hemisphere 40.1
2113 Female, age 91, right hemisphere 37.4
1940 Female, age 85, left hemisphere 34.5
Hippocampus, CA3
nTPM: 41.5
2137 Male, age 80, left hemisphere 51.7
2436 Male, age 74, both hemispheres 45.0
1867 Male, age 76, both hemispheres 43.2
2620 Female, age 94, left hemisphere 42.5
2861 Female, age 67, both hemispheres 34.4
1891 Female, age 85, both hemispheres 32.2
Parahippocampal cortex
nTPM: 38.4
2250 Female, age 67, right hemisphere 46.1
2245 Female, age 91, both hemispheres 44.3
1990 Female, age 91, right hemisphere 42.7
1933 Female, age 85, both hemispheres 40.1
1850 Male, age 80, both hemispheres 39.6
2018 Male, age 76, both hemispheres 37.8
2532 Female, age 72, left hemisphere 36.3
2692 Male, age 74, both hemispheres 33.5
2693 Female, age 94, both hemispheres 31.7
2622 Female, age 67, right hemisphere 31.6
Perirhinal gyrus
nTPM: 43.9
1794 Male, age 80, right hemisphere 53.4
1847 Female, age 91, left hemisphere 50.5
1841 Female, age 85, right hemisphere 42.1
2521 Female, age 94, right hemisphere 42.1
2848 Male, age 76, right hemisphere 31.4
Subiculum
nTPM: 36.1
1977 Female, age 85, both hemispheres 44.4
2619 Male, age 74, both hemispheres 39.4
1901 Male, age 80, both hemispheres 39.0
2042 Male, age 76, both hemispheres 36.1
2729 Female, age 91, right hemisphere 34.6
2438 Female, age 94, left hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 67.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.1
Samples: 197

Max nTPM: 156.0
Min nTPM: 27.8
Std nTPM: 22.0
Median nTPM: 64.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 156.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 143.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 140.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 137.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 127.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 124.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 122.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 121.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 118.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 109.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 104.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 48.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.0
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 29.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 64.7
Pig sample Sample description nTPM
Subiculum
nTPM: 51.7
Samples: 4

Max nTPM: 65.8
Min nTPM: 45.7
Sample A Female 65.8
Sample B Female 45.8
Sample C Male 49.3
Sample D Male 45.7
Dorsal hippocampus
nTPM: 64.8
Samples: 4

Max nTPM: 80.5
Min nTPM: 54.5
Sample A Female 80.5
Sample B Female 63.4
Sample C Male 60.6
Sample D Male 54.5
Entorhinal cortex
nTPM: 51.1
Samples: 4

Max nTPM: 59.4
Min nTPM: 41.8
Sample A Female 54.7
Sample B Female 59.4
Sample C Male 48.3
Sample D Male 41.8
Ventral hippocampus
nTPM: 58.1
Samples: 4

Max nTPM: 65.1
Min nTPM: 43.7
Sample A Female 65.1
Sample B Female 43.7
Sample C Male 61.2
Sample D Male 62.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 52.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 52.5
Min nTPM: 44.9
Sample A Male 49.7
Sample B Male 52.5
Sample C Female 46.5
Sample D Female 44.9
Hippocampal formation
nTPM: 52.3
Samples: 4

Max nTPM: 60.1
Min nTPM: 43.5
Sample A Male 60.1
Sample B Male 43.5
Sample C Female 53.0
Sample D Female 52.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68545477 Antisense, RP_050120_01_A06, Mouse strain C57BL/6J (56 days, male) 2.0

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