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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
75.3
nTPM
HPA Brain:
42.4
nTPM
GTEx:
75.3
nTPM
FANTOM5:
33.5
Scaled Tags Per Million
Pig:
45.8
nTPM
Mouse:
55.3
nTPM
Allen mouse:
1.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.4
Sample id
Sample description
nTPM
Amygdala nTPM: 39.0
2814
Male, age 76, right hemisphere
50.1
2517
Female, age 94, left hemisphere
41.2
2514
Male, age 75, right hemisphere
38.8
1987
Female, age 91, left hemisphere
37.5
2695
Female, age 67, right hemisphere
27.4
Basal amygdala nTPM: 37.6
2110
Male, age 80, left hemisphere
45.2
2243
Female, age 91, right hemisphere
40.5
1955
Male, age 76, both hemispheres
37.5
2609
Male, age 75, right hemisphere
36.1
2685
Female, age 94, left hemisphere
35.5
2827
Female, age 67, right hemisphere
31.0
Central amygdala nTPM: 42.4
2826
Female, age 94, left hemisphere
50.5
1905
Male, age 76, both hemispheres
46.4
2239
Male, age 80, left hemisphere
43.4
2515
Male, age 75, right hemisphere
38.2
2701
Female, age 91, right hemisphere
33.5
Corticomedial amygdala nTPM: 37.0
2829
Male, age 80, left hemisphere
46.7
2242
Female, age 91, right hemisphere
38.1
2428
Male, age 75, right hemisphere
37.0
2429
Female, age 94, left hemisphere
36.5
2535
Female, age 67, right hemisphere
32.0
2240
Male, age 76, both hemispheres
31.5
Lateral amygdala nTPM: 37.5
2534
Female, age 94, left hemisphere
51.5
1883
Male, age 76, both hemispheres
41.0
2255
Female, age 91, right hemisphere
36.0
2516
Male, age 75, right hemisphere
35.5
2256
Male, age 80, left hemisphere
35.0
2830
Female, age 67, right hemisphere
26.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 75.3
Samples: 152
Max nTPM: 261.2
Min nTPM: 29.0
Std nTPM: 29.9
Median nTPM: 68.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
261.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
190.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
182.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
155.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
145.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
135.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
125.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
123.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
121.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
117.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
115.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
114.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
111.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
110.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
106.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
105.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
104.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
102.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
100.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
97.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
96.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
96.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
96.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
95.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
95.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
95.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
95.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
94.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
93.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
91.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
91.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
90.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
90.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
90.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
89.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
89.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
88.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
88.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
86.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
86.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
86.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
86.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
85.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
84.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
84.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
82.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
82.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
81.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
80.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
80.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
79.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
79.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
78.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
78.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
78.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
76.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
76.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
76.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
76.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
76.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
75.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
75.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
75.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
75.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
74.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
74.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
74.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
73.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
72.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
72.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
71.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
70.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
69.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
68.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
68.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
68.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
67.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
67.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
66.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
65.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
64.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
63.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
63.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
63.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
63.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
63.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
63.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
63.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
62.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
62.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
62.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
62.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
62.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
61.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
60.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
60.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
59.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
59.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
59.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
58.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
58.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
58.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
58.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
57.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
57.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
57.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
57.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
56.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
56.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
56.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
55.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
55.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
55.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
55.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
54.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
54.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
53.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
53.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
53.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
53.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
52.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
52.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
52.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
52.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
52.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
51.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
50.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
50.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
50.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
49.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
49.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
48.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
48.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
47.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
46.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
46.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
45.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
44.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
43.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
42.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
41.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
41.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
40.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
34.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
29.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 55.3
Samples: 4
Max nTPM: 57.1
Min nTPM: 53.8
Sample A
Male
55.1
Sample B
Male
57.1
Sample C
Female
55.2
Sample D
Female
53.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.