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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
447.5
nTPM
GTEx:
447.5
nTPM
FANTOM5:
278.0
Scaled Tags Per Million
Pig:
95.1
nTPM
Mouse:
624.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
447.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 447.5
Samples: 105
Max nTPM: 595.3
Min nTPM: 293.1
Std nTPM: 62.2
Median nTPM:
375_1
74 years, female
595.3
237_1
82 years, male
581.2
379_1
60 years, male
578.4
266_1
85 years, male
568.0
243_1
75 years, male
563.3
99_1
64 years, male
546.9
386_1
76 years, male
543.4
137_1
83 years, male
534.7
142_1
61 years, female
529.7
115_1
83 years, male
529.0
347_1
72 years, male
526.4
35_1
74 years, female
525.1
335_1
73 years, female
523.5
42_1
85 years, male
522.7
229_1
69 years, female
522.3
377_1
82 years, female
520.4
6_1
73 years, female
518.0
177_1
74 years, male
513.3
319_1
81 years, male
510.0
162_1
79 years, female
505.5
415_1
77 years, female
503.5
117_1
61 years, male
494.2
265_1
87 years, male
493.2
126_1
63 years, male
491.5
153_1
70 years, female
486.2
506_1
65 years, male
484.8
414_1
84 years, female
483.6
349_1
83 years, male
479.1
189_1
76 years, male
477.2
109_1
81 years, female
476.2
145_1
84 years, male
475.6
17_1
71 years, male
475.2
18_1
88 years, male
470.2
316_1
62 years, male
469.9
246_1
77 years, male
469.8
352_1
62 years, male
469.6
526_1
61 years, male
467.0
217_1
76 years, male
466.3
172_1
72 years, female
465.9
447_1
81 years, male
461.9
394_1
75 years, female
458.3
286_1
68 years, female
457.9
324_1
76 years, male
456.8
315_1
62 years, female
456.7
318_1
68 years, male
453.6
405_1
91 years, male
453.4
4_1
88 years, female
452.6
173_1
67 years, male
452.0
376_1
75 years, female
451.7
356_1
87 years, female
450.1
452_1
88 years, female
449.0
322_1
76 years, male
447.9
354_1
81 years, female
446.7
9_1
66 years, female
446.4
292_1
71 years, male
445.2
503_1
68 years, male
444.0
218_1
71 years, female
443.8
413_1
59 years, female
443.6
468_1
89 years, male
443.2
389_1
86 years, female
440.6
404_1
82 years, female
439.8
406_1
79 years, male
439.4
355_1
70 years, female
438.5
350_1
84 years, female
438.1
264_1
73 years, female
438.0
313_1
79 years, female
436.7
81_1
67 years, male
436.1
499_1
55 years, female
434.4
480_1
63 years, male
434.2
120_1
70 years, female
433.2
32_1
67 years, male
431.8
501_1
88 years, male
430.1
163_1
78 years, male
427.6
425_1
59 years, female
426.5
351_1
91 years, male
422.6
317_1
60 years, male
421.2
295_1
61 years, female
416.5
41_1
94 years, female
413.3
396_1
62 years, male
410.5
119_1
70 years, female
408.3
320_1
89 years, female
406.2
353_1
82 years, female
397.2
2_1
77 years, female
394.6
254_1
77 years, female
393.5
288_1
66 years, female
391.7
43_1
64 years, female
390.8
321_1
62 years, female
390.1
384_1
83 years, male
390.0
518_1
75 years, female
389.7
348_1
84 years, male
377.9
466_1
57 years, female
377.1
311_1
78 years, male
376.7
490_1
67 years, female
374.4
293_1
68 years, female
367.0
314_1
67 years, male
366.4
251_1
78 years, male
364.7
517_1
88 years, male
358.7
291_1
76 years, male
358.4
139_1
64 years, female
343.9
307_1
66 years, female
337.7
149_1
88 years, male
327.8
491_1
89 years, female
316.5
89_1
63 years, male
309.5
308_1
70 years, female
300.6
495_1
57 years, female
293.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.