We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
952.4
nTPM
HPA Brain:
948.9
nTPM
GTEx:
952.4
nTPM
FANTOM5:
980.4
Scaled Tags Per Million
Pig:
1115.3
nTPM
Mouse:
537.0
nTPM
Allen mouse:
11.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
948.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 727.4
2586
Male, age 75, left hemisphere
979.7
2666
Male, age 74, left hemisphere
936.1
1870
Female, age 42, unknown
836.8
2828
Female, age 72, unknown
765.2
2411
Female, age 72, unknown
712.3
1830
Male, age 51, unknown
700.9
1833
Male, age 53, unknown
698.7
1827
Male, age 72, unknown
644.2
2219
Male, age 76, both hemispheres
525.9
2019
Male, age 18, unknown
474.4
Dorsal raphe nucleus nTPM: 772.3
2750
Male, age 76, both hemispheres
903.2
2047
Male, age 72, unknown
891.2
1828
Male, age 53, unknown
706.6
2016
Female, age 72, unknown
702.4
2298
Female, age 72, unknown
658.2
Inferior colliculus nTPM: 537.7
2849
Male, age 72, unknown
616.6
1890
Male, age 53, unknown
557.0
1848
Female, age 42, unknown
553.6
2097
Female, age 72, unknown
423.7
Median raphe nucleus nTPM: 948.9
2220
Male, age 76, midline
948.9
Periaquaductal grey, anterior nTPM: 658.5
1947
Male, age 18, unknown
683.4
1795
Male, age 51, unknown
666.6
2502
Female, age 75, unknown
625.6
Periaquaductal grey, dorsal nTPM: 639.7
2850
Male, age 76, both hemispheres
730.6
1840
Male, age 53, unknown
701.3
2464
Female, age 72, unknown
583.8
1831
Male, age 72, unknown
543.2
Periaquaductal grey, lateral nTPM: 602.6
2053
Male, age 18, unknown
723.8
2140
Male, age 76, both hemispheres
614.1
2272
Male, age 74, both hemispheres
469.9
Pretectal area nTPM: 543.8
2825
Male, age 18, unknown
753.4
2407
Male, age 75, both hemispheres
615.0
1815
Male, age 53, unknown
583.2
2224
Female, age 72, unknown
580.2
2667
Female, age 75, unknown
580.2
1817
Female, age 42, unknown
529.6
1816
Male, age 51, unknown
527.3
1944
Female, age 72, unknown
486.1
2316
Male, age 76, right hemisphere
448.4
2007
Male, age 72, unknown
440.3
2273
Male, age 74, both hemispheres
438.3
Red nucleus nTPM: 752.4
2769
Male, age 72, unknown
843.6
1865
Male, age 51, unknown
821.7
1821
Female, age 72, unknown
819.6
2227
Male, age 72, unknown
812.1
1904
Male, age 53, unknown
811.9
2588
Male, age 74, left hemisphere
803.6
2584
Male, age 75, left hemisphere
791.2
1954
Female, age 42, unknown
789.2
2725
Female, age 75, unknown
728.1
2503
Female, age 72, unknown
684.2
2823
Male, age 76, right hemisphere
658.7
2785
Male, age 18, unknown
465.0
Substantia nigra nTPM: 748.5
2699
Male, age 18, unknown
1019.2
1916
Female, age 42, unknown
922.6
2583
Male, age 75, right hemisphere
826.9
1851
Male, age 51, unknown
805.8
2665
Male, age 74, both hemispheres
760.9
2241
Male, age 72, unknown
737.2
2590
Female, age 75, unknown
625.5
1889
Female, age 72, unknown
614.0
1941
Male, age 53, unknown
605.3
2409
Female, age 72, unknown
567.9
Superior colliculus nTPM: 594.2
2664
Male, age 75, both hemispheres
795.3
2668
Female, age 75, unknown
684.8
2587
Male, age 74, left hemisphere
671.2
1913
Female, age 42, unknown
615.7
1796
Male, age 53, unknown
595.7
2261
Male, age 18, unknown
569.5
1839
Male, age 51, unknown
564.4
1995
Male, age 72, unknown
550.7
2087
Female, age 72, unknown
474.0
1895
Male, age 76, right hemisphere
420.5
Ventral tegmental area nTPM: 833.8
2223
Female, age 72, unknown
1290.6
2021
Male, age 53, unknown
782.4
1915
Female, age 42, unknown
753.5
2410
Female, age 72, unknown
747.4
2218
Male, age 76, both hemispheres
718.0
1942
Male, age 51, unknown
711.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
952.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 952.4
Samples: 139
Max nTPM: 1910.4
Min nTPM: 257.5
Std nTPM: 276.4
Median nTPM: 909.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1910.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1707.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1652.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1619.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1597.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1555.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1527.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1492.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1451.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1431.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1427.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1415.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1386.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
1361.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1352.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1343.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1320.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1293.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1270.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
1230.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1225.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1195.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
1192.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1184.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1183.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1180.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1178.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1145.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1141.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1136.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1127.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1118.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1087.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
1081.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1080.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1065.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1055.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
1053.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1052.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1045.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1044.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1042.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1041.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1036.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1029.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1020.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1019.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1015.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1003.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1003.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1001.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
984.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
976.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
972.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
964.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
959.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
956.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
955.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
952.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
939.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
930.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
929.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
929.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
919.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
919.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
914.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
913.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
911.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
910.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
909.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
903.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
901.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
894.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
893.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
891.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
872.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
866.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
864.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
859.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
847.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
846.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
844.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
840.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
839.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
839.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
836.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
825.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
824.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
821.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
813.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
811.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
808.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
806.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
804.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
800.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
797.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
796.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
794.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
793.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
787.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
786.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
784.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
783.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
781.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
777.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
774.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
765.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
762.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
759.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
759.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
757.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
754.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
750.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
743.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
739.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
733.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
733.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
732.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
727.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
725.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
721.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
717.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
712.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
700.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
698.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
695.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
644.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
632.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
626.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
612.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
598.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
552.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
551.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
531.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
526.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
510.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
427.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
413.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
257.5
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
537.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 537.0
Samples: 4
Max nTPM: 554.7
Min nTPM: 519.2
Sample A
Male
546.7
Sample B
Male
519.2
Sample C
Female
527.4
Sample D
Female
554.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.