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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
851.8
nTPM
HPA Brain:
618.7
nTPM
GTEx:
851.8
nTPM
FANTOM5:
1388.7
Scaled Tags Per Million
Pig:
529.6
nTPM
Mouse:
534.9
nTPM
Allen mouse:
21.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
618.7
Sample id
Sample description
nTPM
Amygdala nTPM: 588.1
2695
Female, age 67, right hemisphere
762.0
2514
Male, age 75, right hemisphere
573.9
2814
Male, age 76, right hemisphere
543.1
1987
Female, age 91, left hemisphere
540.2
2517
Female, age 94, left hemisphere
521.5
Basal amygdala nTPM: 618.7
2609
Male, age 75, right hemisphere
731.0
2243
Female, age 91, right hemisphere
646.3
2110
Male, age 80, left hemisphere
626.9
2685
Female, age 94, left hemisphere
588.0
2827
Female, age 67, right hemisphere
570.3
1955
Male, age 76, both hemispheres
549.6
Central amygdala nTPM: 606.7
2515
Male, age 75, right hemisphere
749.2
2239
Male, age 80, left hemisphere
672.9
2826
Female, age 94, left hemisphere
634.4
2701
Female, age 91, right hemisphere
539.8
1905
Male, age 76, both hemispheres
437.1
Corticomedial amygdala nTPM: 604.8
2829
Male, age 80, left hemisphere
791.0
2428
Male, age 75, right hemisphere
657.2
2242
Female, age 91, right hemisphere
633.6
2240
Male, age 76, both hemispheres
556.2
2535
Female, age 67, right hemisphere
514.3
2429
Female, age 94, left hemisphere
476.8
Lateral amygdala nTPM: 587.8
2516
Male, age 75, right hemisphere
654.4
2830
Female, age 67, right hemisphere
648.6
2256
Male, age 80, left hemisphere
641.3
1883
Male, age 76, both hemispheres
570.4
2534
Female, age 94, left hemisphere
525.8
2255
Female, age 91, right hemisphere
486.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
851.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 851.8
Samples: 152
Max nTPM: 1597.8
Min nTPM: 164.5
Std nTPM: 200.1
Median nTPM: 842.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1597.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1575.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1525.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1522.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1265.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1254.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1253.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1229.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1182.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1168.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1106.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1087.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1084.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1084.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1054.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
1049.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1037.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
1035.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
1021.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1020.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1019.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1011.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1005.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
999.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
998.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
991.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
990.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
987.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
987.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
981.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
976.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
973.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
972.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
961.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
955.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
953.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
951.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
946.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
944.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
940.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
937.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
932.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
930.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
928.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
926.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
919.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
918.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
916.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
912.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
911.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
907.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
900.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
900.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
899.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
896.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
887.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
883.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
881.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
878.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
877.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
875.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
874.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
872.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
872.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
871.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
868.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
867.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
865.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
862.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
860.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
855.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
855.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
852.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
851.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
851.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
843.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
842.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
837.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
837.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
833.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
829.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
828.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
828.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
827.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
826.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
823.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
819.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
812.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
806.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
803.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
801.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
795.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
793.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
792.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
791.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
785.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
774.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
773.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
772.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
760.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
757.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
755.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
748.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
747.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
746.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
745.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
743.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
739.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
737.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
735.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
734.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
732.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
732.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
729.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
722.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
721.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
717.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
706.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
706.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
705.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
699.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
698.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
697.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
696.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
694.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
690.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
689.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
687.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
685.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
684.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
668.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
668.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
664.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
663.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
655.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
654.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
632.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
632.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
632.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
610.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
608.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
607.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
601.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
600.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
580.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
572.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
549.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
544.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
537.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
525.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
465.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
164.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
534.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 535.0
Samples: 4
Max nTPM: 550.9
Min nTPM: 515.3
Sample A
Male
531.0
Sample B
Male
550.9
Sample C
Female
515.3
Sample D
Female
542.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.