HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:48.9 nTPM
HPA Brain:132.8 nTPM
GTEx:48.9 nTPM
FANTOM5:107.2 Scaled Tags Per Million
Pig:58.7 nTPM
Mouse:83.7 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 132.8
Sample id Sample description nTPM
Hippocampus
nTPM: 105.6
2621 Female, age 67, right hemisphere 118.2
1898 Male, age 80, left hemisphere 113.7
2148 Female, age 91, left hemisphere 109.0
1855 Male, age 76, left hemisphere 101.6
2529 Female, age 94, left hemisphere 98.0
1911 Female, age 85, right hemisphere 93.1
Dentate gyrus
nTPM: 108.0
2531 Female, age 67, both hemispheres 132.3
1927 Female, age 91, both hemispheres 113.2
2246 Female, age 85, both hemispheres 108.5
2528 Male, age 74, both hemispheres 103.5
2530 Female, age 94, left hemisphere 97.4
2010 Male, age 76, both hemispheres 93.3
Entorhinal gyrus
nTPM: 122.6
2613 Female, age 94, left hemisphere 162.9
2764 Male, age 80, right hemisphere 135.4
1787 Male, age 76, left hemisphere 126.0
1938 Female, age 85, left hemisphere 124.7
2686 Male, age 75, right hemisphere 99.1
2117 Female, age 91, right hemisphere 87.7
Hippocampus, CA1
nTPM: 113.7
2749 Male, age 80, left hemisphere 149.2
2082 Female, age 91, right hemisphere 111.5
2527 Male, age 74, both hemispheres 105.6
2045 Male, age 76, both hemispheres 105.1
1873 Female, age 85, both hemispheres 97.2
Hippocampus, CA2
nTPM: 103.4
1892 Male, age 76, both hemispheres 111.4
1963 Male, age 80, left hemisphere 106.3
2113 Female, age 91, right hemisphere 105.1
1940 Female, age 85, left hemisphere 104.3
2437 Female, age 94, left hemisphere 100.8
2249 Male, age 74, both hemispheres 92.7
Hippocampus, CA3
nTPM: 120.8
2137 Male, age 80, left hemisphere 154.7
2861 Female, age 67, both hemispheres 140.1
2620 Female, age 94, left hemisphere 139.5
2436 Male, age 74, both hemispheres 104.5
1867 Male, age 76, both hemispheres 99.9
1891 Female, age 85, both hemispheres 86.0
Parahippocampal cortex
nTPM: 113.7
2245 Female, age 91, both hemispheres 128.8
1850 Male, age 80, both hemispheres 127.0
2622 Female, age 67, right hemisphere 120.6
2693 Female, age 94, both hemispheres 119.2
1933 Female, age 85, both hemispheres 118.9
1990 Female, age 91, right hemisphere 112.2
2532 Female, age 72, left hemisphere 110.3
2250 Female, age 67, right hemisphere 104.7
2018 Male, age 76, both hemispheres 99.3
2692 Male, age 74, both hemispheres 95.5
Perirhinal gyrus
nTPM: 132.8
1847 Female, age 91, left hemisphere 154.8
1794 Male, age 80, right hemisphere 137.9
2521 Female, age 94, right hemisphere 137.6
1841 Female, age 85, right hemisphere 118.6
2848 Male, age 76, right hemisphere 115.0
Subiculum
nTPM: 99.7
1977 Female, age 85, both hemispheres 113.4
2619 Male, age 74, both hemispheres 104.1
1901 Male, age 80, both hemispheres 103.5
2438 Female, age 94, left hemisphere 103.4
2729 Female, age 91, right hemisphere 91.2
2042 Male, age 76, both hemispheres 82.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 48.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.9
Samples: 197

Max nTPM: 115.6
Min nTPM: 10.8
Std nTPM: 14.8
Median nTPM: 48.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 115.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 82.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 78.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 77.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 76.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 76.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 76.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 74.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 74.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 72.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 72.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 107.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.2
FF:10153-102I9 76 years, female 107.4
FF:10169-103B7 60 years, female 106.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 58.7
Pig sample Sample description nTPM
Subiculum
nTPM: 57.3
Samples: 4

Max nTPM: 73.0
Min nTPM: 44.8
Sample A Female 73.0
Sample B Female 52.9
Sample C Male 58.3
Sample D Male 44.8
Dorsal hippocampus
nTPM: 56.9
Samples: 4

Max nTPM: 69.9
Min nTPM: 39.8
Sample A Female 69.9
Sample B Female 61.7
Sample C Male 56.3
Sample D Male 39.8
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 53.1
Min nTPM: 43.5
Sample A Female 52.5
Sample B Female 43.5
Sample C Male 53.1
Sample D Male 45.1
Ventral hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 73.5
Min nTPM: 41.7
Sample A Female 55.2
Sample B Female 41.7
Sample C Male 73.5
Sample D Male 64.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 83.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 79.4
Min nTPM: 66.3
Sample A Male 69.9
Sample B Male 66.3
Sample C Female 76.5
Sample D Female 79.4
Hippocampal formation
nTPM: 83.7
Samples: 4

Max nTPM: 89.9
Min nTPM: 76.2
Sample A Male 76.2
Sample B Male 86.3
Sample C Female 89.9
Sample D Female 82.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
72283569 Antisense, RP_051019_01_F06, Mouse strain C57BL/6J (56 days, male) 8.9

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