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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
50.4
nTPM
HPA Brain:
114.8
nTPM
GTEx:
50.4
nTPM
FANTOM5:
135.6
Scaled Tags Per Million
Pig:
46.5
nTPM
Mouse:
76.2
nTPM
Allen mouse:
6.9
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
114.8
Sample id
Sample description
nTPM
Amygdala nTPM: 82.1
2517
Female, age 94, left hemisphere
94.4
1987
Female, age 91, left hemisphere
90.0
2814
Male, age 76, right hemisphere
81.8
2514
Male, age 75, right hemisphere
77.6
2695
Female, age 67, right hemisphere
66.9
Basal amygdala nTPM: 114.8
2243
Female, age 91, right hemisphere
136.3
2685
Female, age 94, left hemisphere
126.6
2110
Male, age 80, left hemisphere
120.9
2827
Female, age 67, right hemisphere
112.1
1955
Male, age 76, both hemispheres
97.0
2609
Male, age 75, right hemisphere
95.6
Central amygdala nTPM: 99.3
2239
Male, age 80, left hemisphere
127.4
2826
Female, age 94, left hemisphere
105.5
2701
Female, age 91, right hemisphere
92.9
2515
Male, age 75, right hemisphere
89.6
1905
Male, age 76, both hemispheres
81.1
Corticomedial amygdala nTPM: 112.9
2829
Male, age 80, left hemisphere
130.8
2535
Female, age 67, right hemisphere
121.8
2429
Female, age 94, left hemisphere
119.8
2242
Female, age 91, right hemisphere
117.6
2240
Male, age 76, both hemispheres
93.8
2428
Male, age 75, right hemisphere
93.6
Lateral amygdala nTPM: 101.0
2534
Female, age 94, left hemisphere
122.1
2255
Female, age 91, right hemisphere
109.7
2256
Male, age 80, left hemisphere
109.5
1883
Male, age 76, both hemispheres
92.8
2830
Female, age 67, right hemisphere
91.4
2516
Male, age 75, right hemisphere
80.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
50.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 50.4
Samples: 152
Max nTPM: 96.0
Min nTPM: 12.7
Std nTPM: 13.9
Median nTPM: 49.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
96.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
83.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
79.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
78.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
77.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
76.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
73.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
73.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
71.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
71.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
71.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
70.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
69.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
69.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
68.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
68.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
68.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
68.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
67.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
67.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
67.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
67.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
66.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
65.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
65.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
65.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
64.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
63.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
62.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
61.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
61.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
61.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
61.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
61.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
60.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
60.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
59.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
59.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
59.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
59.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
58.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
57.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
57.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
57.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
56.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
56.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
56.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
56.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
56.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
56.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
56.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
56.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
55.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
55.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
55.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
54.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
54.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
54.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
53.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
53.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
53.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
52.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
52.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
52.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
52.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
51.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
50.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
50.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
50.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
50.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
49.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
49.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
49.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
49.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
48.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
48.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
48.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
47.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
47.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
47.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
47.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
47.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
47.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
45.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
45.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
45.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
45.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
44.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
43.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
43.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
43.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
43.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
43.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
43.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
42.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
42.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
42.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
41.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
41.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
41.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
41.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
41.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
41.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
40.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
40.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
40.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
40.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
39.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
39.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
39.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
39.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
39.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
39.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
39.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
38.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
38.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
38.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
38.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
37.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
37.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
37.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
36.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
36.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
35.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
34.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
34.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
33.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
33.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
33.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
33.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
32.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
32.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
31.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
31.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
31.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
30.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
30.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
28.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
23.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
22.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
13.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
12.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 76.2
Samples: 4
Max nTPM: 78.2
Min nTPM: 75.0
Sample A
Male
78.2
Sample B
Male
75.0
Sample C
Female
76.5
Sample D
Female
75.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
