HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:157.3 nTPM
HPA Brain:90.0 nTPM
GTEx:157.3 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:76.7 nTPM
Mouse:131.1 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038807Antibody HPA039252Antibody CAB047300
Glial cells LowNot detectedNot detected
Neuronal cells MediumHighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 90.0
Sample id Sample description nTPM
Hippocampus
nTPM: 78.6
1898 Male, age 80, left hemisphere 98.0
2529 Female, age 94, left hemisphere 84.5
2621 Female, age 67, right hemisphere 78.1
1855 Male, age 76, left hemisphere 77.3
2148 Female, age 91, left hemisphere 69.9
1911 Female, age 85, right hemisphere 63.6
Dentate gyrus
nTPM: 77.9
2530 Female, age 94, left hemisphere 98.7
2010 Male, age 76, both hemispheres 87.9
1927 Female, age 91, both hemispheres 76.8
2531 Female, age 67, both hemispheres 72.5
2528 Male, age 74, both hemispheres 68.3
2246 Female, age 85, both hemispheres 63.0
Entorhinal gyrus
nTPM: 81.1
2764 Male, age 80, right hemisphere 99.4
1938 Female, age 85, left hemisphere 86.3
1787 Male, age 76, left hemisphere 79.7
2686 Male, age 75, right hemisphere 79.0
2117 Female, age 91, right hemisphere 72.4
2613 Female, age 94, left hemisphere 69.6
Hippocampus, CA1
nTPM: 79.8
2749 Male, age 80, left hemisphere 104.5
1873 Female, age 85, both hemispheres 76.1
2045 Male, age 76, both hemispheres 75.9
2082 Female, age 91, right hemisphere 73.6
2527 Male, age 74, both hemispheres 68.9
Hippocampus, CA2
nTPM: 83.4
1892 Male, age 76, both hemispheres 99.0
1963 Male, age 80, left hemisphere 96.1
2437 Female, age 94, left hemisphere 77.6
2249 Male, age 74, both hemispheres 77.3
1940 Female, age 85, left hemisphere 76.4
2113 Female, age 91, right hemisphere 73.7
Hippocampus, CA3
nTPM: 72.7
2137 Male, age 80, left hemisphere 87.4
1867 Male, age 76, both hemispheres 84.0
1891 Female, age 85, both hemispheres 69.7
2861 Female, age 67, both hemispheres 68.2
2436 Male, age 74, both hemispheres 66.0
2620 Female, age 94, left hemisphere 61.1
Parahippocampal cortex
nTPM: 78.1
1850 Male, age 80, both hemispheres 99.1
1933 Female, age 85, both hemispheres 86.0
1990 Female, age 91, right hemisphere 83.2
2245 Female, age 91, both hemispheres 82.9
2018 Male, age 76, both hemispheres 79.5
2692 Male, age 74, both hemispheres 76.7
2250 Female, age 67, right hemisphere 71.5
2693 Female, age 94, both hemispheres 71.5
2532 Female, age 72, left hemisphere 68.5
2622 Female, age 67, right hemisphere 61.9
Perirhinal gyrus
nTPM: 90.0
1847 Female, age 91, left hemisphere 102.2
1794 Male, age 80, right hemisphere 101.6
1841 Female, age 85, right hemisphere 83.6
2521 Female, age 94, right hemisphere 81.6
2848 Male, age 76, right hemisphere 81.0
Subiculum
nTPM: 72.5
1977 Female, age 85, both hemispheres 87.2
1901 Male, age 80, both hemispheres 82.1
2619 Male, age 74, both hemispheres 74.9
2042 Male, age 76, both hemispheres 70.8
2729 Female, age 91, right hemisphere 60.2
2438 Female, age 94, left hemisphere 60.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 157.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 157.3
Samples: 197

Max nTPM: 311.8
Min nTPM: 80.9
Std nTPM: 36.5
Median nTPM: 150.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 311.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 270.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 267.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 244.6
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 243.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 239.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 233.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 232.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 230.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 229.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 226.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.9
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.7
Pig sample Sample description nTPM
Subiculum
nTPM: 64.7
Samples: 4

Max nTPM: 88.3
Min nTPM: 51.6
Sample A Female 88.3
Sample B Female 63.4
Sample C Male 55.6
Sample D Male 51.6
Dorsal hippocampus
nTPM: 76.7
Samples: 4

Max nTPM: 100.0
Min nTPM: 55.3
Sample A Female 100.0
Sample B Female 71.1
Sample C Male 80.5
Sample D Male 55.3
Entorhinal cortex
nTPM: 69.3
Samples: 4

Max nTPM: 77.4
Min nTPM: 57.4
Sample A Female 72.2
Sample B Female 77.4
Sample C Male 70.1
Sample D Male 57.4
Ventral hippocampus
nTPM: 68.4
Samples: 4

Max nTPM: 80.0
Min nTPM: 50.4
Sample A Female 66.9
Sample B Female 50.4
Sample C Male 76.4
Sample D Male 80.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 131.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 123.7
Samples: 4

Max nTPM: 130.6
Min nTPM: 116.9
Sample A Male 116.9
Sample B Male 125.6
Sample C Female 130.6
Sample D Female 121.5
Hippocampal formation
nTPM: 131.1
Samples: 4

Max nTPM: 143.8
Min nTPM: 123.6
Sample A Male 143.8
Sample B Male 126.6
Sample C Female 123.6
Sample D Female 130.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
2503 Antisense, RP_040407_02_H10, Mouse strain C57BL/6J (56 days, male) 8.1
2504 Antisense, RP_040407_02_H10, Mouse strain C57BL/6J (56 days, male) 4.8

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