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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
180.8
nTPM
HPA Brain:
82.2
nTPM
GTEx:
180.8
nTPM
FANTOM5:
70.6
Scaled Tags Per Million
Pig:
59.2
nTPM
Mouse:
133.3
nTPM
Allen mouse:
8.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
82.2
Sample id
Sample description
nTPM
Amygdala nTPM: 79.7
2814
Male, age 76, right hemisphere
85.0
2695
Female, age 67, right hemisphere
84.8
2514
Male, age 75, right hemisphere
78.4
1987
Female, age 91, left hemisphere
76.6
2517
Female, age 94, left hemisphere
73.5
Basal amygdala nTPM: 75.2
2609
Male, age 75, right hemisphere
80.5
2243
Female, age 91, right hemisphere
79.1
2685
Female, age 94, left hemisphere
76.8
2110
Male, age 80, left hemisphere
75.8
1955
Male, age 76, both hemispheres
70.2
2827
Female, age 67, right hemisphere
68.9
Central amygdala nTPM: 82.2
2826
Female, age 94, left hemisphere
100.8
1905
Male, age 76, both hemispheres
81.5
2515
Male, age 75, right hemisphere
80.8
2239
Male, age 80, left hemisphere
78.1
2701
Female, age 91, right hemisphere
70.0
Corticomedial amygdala nTPM: 76.3
2428
Male, age 75, right hemisphere
84.8
2829
Male, age 80, left hemisphere
82.5
2242
Female, age 91, right hemisphere
77.8
2429
Female, age 94, left hemisphere
76.1
2535
Female, age 67, right hemisphere
68.6
2240
Male, age 76, both hemispheres
68.0
Lateral amygdala nTPM: 81.0
1883
Male, age 76, both hemispheres
88.2
2830
Female, age 67, right hemisphere
88.0
2534
Female, age 94, left hemisphere
85.2
2516
Male, age 75, right hemisphere
83.6
2255
Female, age 91, right hemisphere
71.0
2256
Male, age 80, left hemisphere
69.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
180.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 180.8
Samples: 152
Max nTPM: 393.4
Min nTPM: 101.8
Std nTPM: 48.2
Median nTPM: 173.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
393.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
360.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
352.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
344.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
300.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
284.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
282.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
270.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
258.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
257.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
256.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
254.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
250.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
249.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
243.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
239.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
238.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
231.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
226.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
226.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
224.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
222.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
218.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
216.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
216.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
215.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
212.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
210.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
208.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
207.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
207.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
206.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
205.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
204.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
203.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
202.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
201.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
201.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
200.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
199.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
197.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
195.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
195.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
194.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
194.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
194.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
193.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
192.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
192.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
192.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
191.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
189.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
189.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
187.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
184.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
183.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
183.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
181.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
180.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
180.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
180.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
179.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
179.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
179.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
178.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
178.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
177.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
176.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
176.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
175.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
175.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
174.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
174.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
174.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
174.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
174.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
173.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
172.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
172.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
171.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
170.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
167.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
167.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
166.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
164.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
164.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
164.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
161.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
161.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
161.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
159.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
159.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
159.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
158.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
158.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
158.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
156.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
156.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
156.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
156.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
155.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
154.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
154.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
154.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
153.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
153.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
153.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
152.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
152.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
151.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
151.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
151.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
150.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
149.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
149.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
148.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
148.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
148.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
145.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
144.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
143.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
143.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
142.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
141.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
141.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
140.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
140.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
140.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
139.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
139.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
138.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
137.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
137.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
135.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
133.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
133.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
132.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
132.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
129.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
128.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
128.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
126.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
126.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
125.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
125.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
124.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
120.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
120.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
119.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
118.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
114.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
101.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
133.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 133.3
Samples: 4
Max nTPM: 139.9
Min nTPM: 128.6
Sample A
Male
133.0
Sample B
Male
139.9
Sample C
Female
131.6
Sample D
Female
128.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.