HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:63.6 nTPM
HPA Brain:40.9 nTPM
GTEx:63.6 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:36.6 nTPM
Mouse:45.5 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068436
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.1
2529 Female, age 94, left hemisphere 38.5
1911 Female, age 85, right hemisphere 36.3
1898 Male, age 80, left hemisphere 36.1
2148 Female, age 91, left hemisphere 34.8
2621 Female, age 67, right hemisphere 34.5
1855 Male, age 76, left hemisphere 30.5
Dentate gyrus
nTPM: 35.7
2530 Female, age 94, left hemisphere 47.0
1927 Female, age 91, both hemispheres 36.9
2010 Male, age 76, both hemispheres 35.4
2246 Female, age 85, both hemispheres 34.4
2531 Female, age 67, both hemispheres 32.0
2528 Male, age 74, both hemispheres 28.6
Entorhinal gyrus
nTPM: 38.1
2686 Male, age 75, right hemisphere 42.1
2117 Female, age 91, right hemisphere 40.7
1787 Male, age 76, left hemisphere 38.2
2764 Male, age 80, right hemisphere 37.1
1938 Female, age 85, left hemisphere 36.8
2613 Female, age 94, left hemisphere 33.7
Hippocampus, CA1
nTPM: 34.9
2749 Male, age 80, left hemisphere 46.7
1873 Female, age 85, both hemispheres 36.5
2045 Male, age 76, both hemispheres 36.2
2527 Male, age 74, both hemispheres 28.5
2082 Female, age 91, right hemisphere 26.6
Hippocampus, CA2
nTPM: 37.2
1963 Male, age 80, left hemisphere 45.7
2249 Male, age 74, both hemispheres 39.2
1892 Male, age 76, both hemispheres 38.2
1940 Female, age 85, left hemisphere 36.4
2437 Female, age 94, left hemisphere 33.1
2113 Female, age 91, right hemisphere 30.5
Hippocampus, CA3
nTPM: 38.5
1867 Male, age 76, both hemispheres 47.3
2436 Male, age 74, both hemispheres 43.6
2137 Male, age 80, left hemisphere 42.1
1891 Female, age 85, both hemispheres 40.1
2620 Female, age 94, left hemisphere 29.9
2861 Female, age 67, both hemispheres 27.9
Parahippocampal cortex
nTPM: 31.3
1990 Female, age 91, right hemisphere 37.8
1850 Male, age 80, both hemispheres 33.5
2692 Male, age 74, both hemispheres 33.4
2532 Female, age 72, left hemisphere 32.9
1933 Female, age 85, both hemispheres 32.3
2018 Male, age 76, both hemispheres 31.8
2245 Female, age 91, both hemispheres 31.1
2693 Female, age 94, both hemispheres 28.5
2250 Female, age 67, right hemisphere 26.1
2622 Female, age 67, right hemisphere 25.2
Perirhinal gyrus
nTPM: 33.0
1847 Female, age 91, left hemisphere 35.5
2848 Male, age 76, right hemisphere 34.7
1794 Male, age 80, right hemisphere 32.7
2521 Female, age 94, right hemisphere 32.0
1841 Female, age 85, right hemisphere 30.2
Subiculum
nTPM: 40.9
2042 Male, age 76, both hemispheres 55.9
1977 Female, age 85, both hemispheres 45.4
1901 Male, age 80, both hemispheres 43.1
2438 Female, age 94, left hemisphere 39.9
2729 Female, age 91, right hemisphere 31.4
2619 Male, age 74, both hemispheres 29.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 63.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.6
Samples: 197

Max nTPM: 151.3
Min nTPM: 37.6
Std nTPM: 20.3
Median nTPM: 58.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 151.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 145.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 135.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 134.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 128.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 123.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 120.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 111.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 111.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 109.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 107.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.6
Pig sample Sample description nTPM
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 49.4
Min nTPM: 30.2
Sample A Female 49.4
Sample B Female 35.6
Sample C Male 31.3
Sample D Male 30.2
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 33.6
Min nTPM: 27.6
Sample A Female 33.6
Sample B Female 28.5
Sample C Male 31.7
Sample D Male 27.6
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 38.9
Min nTPM: 27.4
Sample A Female 28.9
Sample B Female 38.9
Sample C Male 35.8
Sample D Male 27.4
Ventral hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 32.8
Min nTPM: 24.8
Sample A Female 28.3
Sample B Female 24.8
Sample C Male 32.8
Sample D Male 29.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 45.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.6
Samples: 4

Max nTPM: 47.2
Min nTPM: 41.2
Sample A Male 41.2
Sample B Male 45.1
Sample C Female 44.9
Sample D Female 47.2
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 51.2
Min nTPM: 40.3
Sample A Male 49.2
Sample B Male 41.2
Sample C Female 51.2
Sample D Female 40.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
79749575 Antisense, RP_071204_02_C10, Mouse strain C57BL/6J (56 days, male) 2.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org