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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
61.8
nTPM
HPA Brain:
44.4
nTPM
GTEx:
61.8
nTPM
FANTOM5:
41.4
Scaled Tags Per Million
Pig:
28.6
nTPM
Mouse:
49.0
nTPM
Allen mouse:
3.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
44.4
Sample id
Sample description
nTPM
Amygdala nTPM: 41.7
2695
Female, age 67, right hemisphere
51.6
2814
Male, age 76, right hemisphere
48.4
2514
Male, age 75, right hemisphere
38.6
2517
Female, age 94, left hemisphere
36.7
1987
Female, age 91, left hemisphere
33.5
Basal amygdala nTPM: 38.8
2827
Female, age 67, right hemisphere
48.9
2110
Male, age 80, left hemisphere
40.5
2609
Male, age 75, right hemisphere
40.0
1955
Male, age 76, both hemispheres
36.9
2685
Female, age 94, left hemisphere
36.1
2243
Female, age 91, right hemisphere
30.1
Central amygdala nTPM: 44.4
2826
Female, age 94, left hemisphere
68.9
1905
Male, age 76, both hemispheres
41.7
2515
Male, age 75, right hemisphere
41.6
2239
Male, age 80, left hemisphere
36.0
2701
Female, age 91, right hemisphere
34.0
Corticomedial amygdala nTPM: 35.2
2829
Male, age 80, left hemisphere
40.5
2428
Male, age 75, right hemisphere
39.8
2240
Male, age 76, both hemispheres
35.6
2535
Female, age 67, right hemisphere
34.8
2429
Female, age 94, left hemisphere
34.7
2242
Female, age 91, right hemisphere
25.7
Lateral amygdala nTPM: 44.3
2830
Female, age 67, right hemisphere
60.7
2534
Female, age 94, left hemisphere
50.2
2516
Male, age 75, right hemisphere
47.5
1883
Male, age 76, both hemispheres
42.8
2256
Male, age 80, left hemisphere
37.2
2255
Female, age 91, right hemisphere
27.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
61.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 61.8
Samples: 152
Max nTPM: 119.9
Min nTPM: 33.1
Std nTPM: 17.1
Median nTPM: 57.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
119.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
116.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
114.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
112.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
100.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
97.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
97.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
95.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
94.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
94.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
91.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
91.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
90.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
87.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
86.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
86.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
85.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
84.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
84.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
83.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
82.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
81.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
81.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
80.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
80.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
79.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
78.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
78.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
77.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
73.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
73.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
72.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
72.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
71.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
69.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
69.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
68.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
67.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
67.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
67.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
67.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
67.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
66.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
66.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
65.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
64.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
64.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
64.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
64.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
64.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
63.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
63.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
63.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
63.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
62.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
62.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
62.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
62.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
62.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
61.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
61.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
61.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
61.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
61.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
59.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
59.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
59.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
59.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
58.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
58.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
58.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
58.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
58.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
57.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
57.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
56.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
56.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
56.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
56.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
56.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
56.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
56.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
55.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
55.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
55.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
55.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
55.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
54.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
54.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
54.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
53.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
53.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
53.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
53.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
53.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
53.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
53.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
53.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
52.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
52.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
52.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
52.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
52.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
52.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
52.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
51.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
51.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
51.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
51.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
50.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
50.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
49.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
49.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
49.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
49.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
48.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
48.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
48.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
48.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
48.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
47.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
47.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
45.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
45.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
45.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
45.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
44.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
43.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
43.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
43.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
43.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
43.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
43.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
42.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
42.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
41.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
41.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
41.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
41.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
38.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
37.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
35.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
33.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 49.0
Samples: 4
Max nTPM: 52.5
Min nTPM: 45.7
Sample A
Male
45.7
Sample B
Male
51.1
Sample C
Female
52.5
Sample D
Female
46.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
