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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAGLN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
916.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
539.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
224.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
219.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
208.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
189.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
187.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
168.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
163.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
162.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
162.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
161.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
161.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
161.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
155.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
144.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
143.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
135.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
132.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
127.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
127.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
119.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
119.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
118.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
117.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
114.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
106.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
106.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
106.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
104.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
102.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
98.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
96.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
96.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
93.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
90.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
90.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
86.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
85.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
82.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
80.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
80.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
79.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
78.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
77.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
74.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
73.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
71.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
60.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
60.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
60.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
60.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
59.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
58.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
56.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
54.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
54.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
52.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
49.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
31.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAGLN2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
470.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1481.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1296.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1248.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1129.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1007.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
995.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
977.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
975.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
935.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
931.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
894.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
882.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
874.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
855.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
841.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
837.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
833.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
832.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
828.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
826.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
814.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
808.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
786.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
776.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
767.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
767.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
757.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
754.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
750.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
750.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
749.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
744.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
743.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
741.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
739.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
737.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
736.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
731.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
723.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
722.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
721.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
718.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
716.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
709.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
708.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
707.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
703.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
700.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
700.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
698.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
695.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
693.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
690.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
687.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
680.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
678.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
676.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
676.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
672.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
668.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
666.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
666.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
661.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
660.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
657.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
656.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
655.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
653.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
649.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
647.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
646.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
645.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
644.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
643.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
641.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
638.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
629.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
629.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
626.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
626.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
624.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
620.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
620.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
620.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
620.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
618.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
618.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
617.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
615.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
615.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
615.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
615.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
615.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
613.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
612.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
612.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
611.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
609.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
609.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
608.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
606.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
605.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
604.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
604.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
604.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
603.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
602.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
601.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
600.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
600.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
598.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
596.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
594.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
594.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
593.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
593.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
592.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
590.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
589.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
588.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
585.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
585.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
584.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
583.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
582.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
579.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
578.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
577.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
577.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
573.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
570.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
569.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
568.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
568.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
566.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
565.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
565.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
564.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
564.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
562.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
561.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
559.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
559.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
559.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
557.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
556.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
556.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
554.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
554.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
554.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
549.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
547.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
546.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
546.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
546.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
546.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
544.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
543.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
541.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
541.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
541.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
541.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
541.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
540.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
540.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
539.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
538.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
538.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
535.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
534.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
534.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
532.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
532.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
531.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
529.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
528.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
527.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
527.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
527.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
526.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
524.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
523.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
522.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
521.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
520.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
520.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
518.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
518.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
518.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
517.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
516.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
516.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
515.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
515.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
514.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
513.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
512.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
510.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
510.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
510.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
509.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
509.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
508.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
507.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
506.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
504.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
504.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
503.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
503.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
502.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
502.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
501.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
501.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
501.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
501.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
500.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
496.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
496.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
495.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
493.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
492.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
492.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
491.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
491.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
489.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
488.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
488.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
483.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
483.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
481.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
479.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
479.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
478.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
478.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
478.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
478.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
477.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
477.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
476.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
476.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
474.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
474.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
473.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
472.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
470.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
469.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
468.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
467.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
466.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
466.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
463.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
463.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
462.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
460.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
459.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
459.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
458.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
458.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
457.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
457.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
456.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
455.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
455.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
455.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
454.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
452.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
451.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
449.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
448.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
446.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
446.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
446.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
444.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
444.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
444.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
443.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
442.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
438.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
438.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
437.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
436.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
436.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
435.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
435.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
434.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
432.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
432.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
430.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
430.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
430.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
429.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
429.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
429.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
428.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
428.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
427.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
424.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
423.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
421.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
420.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
419.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
418.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
417.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
417.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
413.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
412.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
411.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
411.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
411.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
410.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
410.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
410.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
409.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
408.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
407.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
407.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
407.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
406.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
406.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
405.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
405.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
405.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
404.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
404.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
403.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
403.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
402.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
402.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
401.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
401.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
400.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
399.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
396.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
396.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
395.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
395.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
395.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
393.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
393.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
392.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
392.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
392.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
391.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
390.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
390.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
389.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
387.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
387.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
386.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
386.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
386.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
385.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
384.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
384.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
380.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
380.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
380.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
379.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
378.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
378.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
376.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
376.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
376.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
376.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
376.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
376.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
375.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
375.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
375.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
372.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
370.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
370.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
368.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
368.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
368.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
367.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
367.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
365.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
365.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
365.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
363.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
362.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
362.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
361.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
360.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
358.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
357.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
357.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
357.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
355.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
354.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
354.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
353.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
351.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
351.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
349.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
348.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
347.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
346.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
346.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
340.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
339.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
339.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
339.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
338.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
336.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
336.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
335.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
335.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
334.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
334.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
333.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
333.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
333.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
333.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
332.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
331.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
331.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
330.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
330.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
328.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
327.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
327.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
324.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
323.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
323.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
322.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
321.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
320.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
317.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
317.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
317.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
314.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
313.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
312.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
310.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
310.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
309.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
308.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
304.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
303.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
302.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
301.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
301.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
301.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
300.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
300.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
300.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
299.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
299.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
298.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
297.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
296.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
296.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
295.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
292.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
291.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
291.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
290.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
287.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
283.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
282.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
278.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
276.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
275.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
274.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
270.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
267.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
264.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
259.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
256.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
252.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
249.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
248.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
247.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
246.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
245.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
244.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
242.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
239.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
239.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
237.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
237.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
236.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
234.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
232.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
230.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
228.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
225.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
224.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
222.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
204.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
200.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
194.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
187.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
186.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
180.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
177.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
177.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
174.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
173.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
159.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
154.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
153.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
144.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
144.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
138.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
133.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
121.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
121.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
119.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
116.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
114.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
112.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
99.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
88.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
86.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
85.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
85.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
83.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAGLN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
422.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
945.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
867.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
867.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
791.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
760.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
674.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
662.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
652.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
635.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
628.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
614.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
604.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
587.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
582.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
580.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
580.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
561.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
543.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
533.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
525.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
518.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
513.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
504.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
500.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
497.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
496.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
493.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
486.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
485.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
469.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
460.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
460.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
458.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
456.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
454.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
449.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
446.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
442.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
441.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
436.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
433.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
426.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
415.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
412.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
407.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
401.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
400.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
395.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
392.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
386.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
383.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
382.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
381.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
378.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
376.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
371.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
371.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
370.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
366.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
364.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
359.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
358.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
349.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
347.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
344.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
342.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
342.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
341.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
338.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
337.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
336.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
334.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
333.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
332.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
327.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
321.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
316.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
310.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
309.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
308.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
306.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
303.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
302.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
302.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
299.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
291.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
290.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
286.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
283.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
281.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
278.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
267.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
259.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
244.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
239.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
238.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
222.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
202.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
107.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAGLN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
367.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1388.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1045.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1032.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1029.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
990.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
981.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
953.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
920.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
912.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
901.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
802.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
791.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
780.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
768.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
726.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
722.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
706.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
695.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
688.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
679.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
672.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
670.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
667.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
658.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
657.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
655.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
649.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
649.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
627.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
625.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
614.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
612.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
612.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
610.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
607.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
604.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
592.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
587.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
586.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
581.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
568.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
563.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
563.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
561.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
560.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
555.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
555.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
548.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
548.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
545.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
541.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
534.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
534.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
534.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
534.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
529.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
529.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
526.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
524.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
522.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
514.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
509.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
500.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
498.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
496.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
494.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
493.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
492.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
487.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
482.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
481.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
480.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
478.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
475.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
463.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
462.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
459.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
453.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
450.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
450.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
445.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
445.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
444.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
443.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
440.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
435.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
435.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
430.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
420.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
416.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
414.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
412.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
412.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
411.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
411.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
410.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
409.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
409.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
408.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
406.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
399.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
399.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
398.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
398.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
398.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
395.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
391.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
391.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
390.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
390.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
390.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
389.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
387.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
385.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
384.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
383.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
379.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
378.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
375.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
369.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
369.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
368.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
364.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
355.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
350.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
349.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
348.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
348.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
347.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
347.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
343.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
343.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
342.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
342.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
339.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
338.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
338.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
334.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
334.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
332.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
330.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
330.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
327.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
326.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
326.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
322.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
320.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
320.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
318.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
317.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
316.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
316.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
312.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
311.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
310.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
306.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
306.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
305.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
304.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
301.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
299.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
297.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
297.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
297.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
295.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
294.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
292.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
291.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
285.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
285.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
284.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
281.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
278.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
278.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
275.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
275.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
269.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
268.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
268.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
267.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
264.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
261.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
259.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
258.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
258.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
257.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
254.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
252.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
250.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
249.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
247.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
246.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
245.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
233.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
229.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
229.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
229.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
229.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
228.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
226.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
225.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
225.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
223.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
222.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
222.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
220.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
217.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
216.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
215.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
214.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
213.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
212.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
212.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
210.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
210.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
208.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
207.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
206.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
203.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
199.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
199.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
198.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
198.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
197.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
197.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
196.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
194.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
192.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
191.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
188.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
184.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
183.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
181.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
177.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
176.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
170.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
170.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
168.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
168.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
168.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
166.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
166.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
165.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
164.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
164.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
162.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
160.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
158.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
155.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
155.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
153.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
149.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
142.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
137.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
136.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
135.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
134.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
128.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
127.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
127.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
126.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
126.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
125.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
119.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
117.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
113.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
111.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
110.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
110.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
103.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
93.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
91.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
86.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
85.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
83.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
82.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
79.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
77.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
71.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
50.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
1.3
CPT0066480003
Tumor
1.2
CPT0000640003
Tumor
1.0
CPT0063630003
Tumor
0.9
CPT0069000003
Tumor
0.8
CPT0021240003
Tumor
0.8
CPT0011240003
Tumor
0.8
CPT0017410003
Tumor
0.8
CPT0075560003
Tumor
0.7
CPT0024680001
Normal
0.7
CPT0084590001
Normal
0.6
CPT0015910003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0086870003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0002350011
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0025170003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0075720003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0024670003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0019130003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0092190003
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0017850003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0065430003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0001340003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0025350003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0069190001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0009060003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0078930003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0002370001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0088500001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0066430001
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0023710001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0089480003
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0015730003
Tumor
-0.6
CPT0001350001
Normal
-0.6
CPT0012770003
Normal
-0.7
CPT0078660003
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0002270011
Tumor
-0.9
CPT0011410003
Tumor
-1.0
CPT0078800003
Tumor
-1.0
CPT0079180003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
