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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAGLN2 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
538.0
Number of samples
349
Samples
Sample
Description
TPM
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1702.9
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1391.2
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1295.1
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1267.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1203.5
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1168.9
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1116.7
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1100.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1063.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1047.2
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1032.7
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1020.6
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1020.0
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1016.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1000.6
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
989.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
971.6
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
941.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
937.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
937.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
936.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
936.1
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
933.1
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
922.9
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
920.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
892.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
888.5
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
877.3
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
874.4
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
870.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
868.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
860.2
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
848.2
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
845.4
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
844.5
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
838.7
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
826.7
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
822.8
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
817.0
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
799.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
798.6
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
796.7
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
795.6
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
785.4
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
782.5
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
782.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
779.3
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
777.6
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
775.5
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
775.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
768.0
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
765.8
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
757.5
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
756.9
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
755.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
753.4
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
751.3
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
748.0
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
747.8
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
745.2
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
739.7
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
738.3
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
734.6
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
731.7
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
731.0
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
724.9
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
723.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
723.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
723.3
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
720.8
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
715.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
713.4
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
710.2
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
709.2
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
704.5
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
700.3
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
699.8
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
699.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
693.2
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
686.1
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
682.5
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
675.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
675.3
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
674.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
674.3
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
671.5
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
670.7
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
666.9
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
664.2
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
663.9
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
662.1
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
658.9
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
657.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
656.3
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
655.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
648.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
647.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
646.9
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
644.8
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
642.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
637.5
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
636.4
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
635.9
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
635.0
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
634.3
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
634.3
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
634.1
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
628.9
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
619.8
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
616.2
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
611.4
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
611.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
600.4
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
598.6
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
598.1
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
596.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
595.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
590.6
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
588.9
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
584.7
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
584.0
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
582.0
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
582.0
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
580.8
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
577.8
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
577.1
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
576.7
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
573.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
573.0
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
571.9
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
569.8
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
567.8
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
566.5
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
565.1
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
564.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
560.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
558.5
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
556.4
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
554.5
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
553.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
552.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
550.5
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
547.7
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
544.7
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
542.2
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
541.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
538.7
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
538.7
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
538.2
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
537.2
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
534.9
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
531.4
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
528.1
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
527.9
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
526.2
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
523.9
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
522.6
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
518.1
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
516.6
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
511.4
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
509.7
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
506.9
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
502.1
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
501.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
499.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
499.1
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
498.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
496.2
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
495.5
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
495.5
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
493.1
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
489.9
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
489.8
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
489.4
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
488.1
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
484.7
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
484.2
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
484.1
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
482.0
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
477.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
477.0
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
475.9
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
474.0
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
472.1
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
471.9
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
471.5
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
471.2
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
471.0
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
470.9
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
470.0
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
469.3
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
468.5
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
466.7
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
465.0
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
462.7
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
462.2
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
461.8
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
460.2
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
459.9
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
459.4
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
459.0
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
457.4
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
451.7
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
450.7
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
449.1
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
448.3
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
447.4
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
447.3
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
446.6
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
444.4
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
443.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
442.2
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
441.7
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
437.7
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
434.2
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
433.8
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
433.3
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
433.2
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
433.1
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
432.2
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
430.1
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
430.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
430.1
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
428.9
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
426.9
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
426.2
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
422.1
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
421.3
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
420.9
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
418.3
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
416.3
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
416.1
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
414.9
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
412.1
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
412.0
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
411.2
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
411.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
409.6
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
408.7
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
407.0
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
407.0
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
406.5
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
404.6
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
404.6
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
403.1
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
401.4
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
400.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
399.0
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
398.7
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
397.5
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
395.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
394.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
392.5
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
392.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
392.3
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
392.3
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
391.0
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
389.4
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
386.9
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
386.1
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
384.5
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
384.3
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
383.5
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
381.3
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
380.7
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
379.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
379.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
378.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
377.3
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
376.6
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
374.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
373.5
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
371.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
369.8
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
361.5
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
358.6
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
357.8
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
357.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
356.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
355.4
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
355.1
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
355.0
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
353.5
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
352.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
352.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
350.6
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
347.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
341.4
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
338.4
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
337.7
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
334.9
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
333.3
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
329.5
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
327.1
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
323.0
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
321.8
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
320.5
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
320.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
319.8
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
318.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
317.3
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
315.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
314.8
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
311.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
305.2
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
303.5
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
300.1
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
298.4
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
295.4
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
293.3
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
292.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
289.1
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
286.5
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
285.9
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
285.3
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
282.8
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
276.5
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
276.2
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
274.2
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
273.7
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
270.3
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
269.4
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
268.6
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
264.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
258.8
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
258.2
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
256.4
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
255.4
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
248.9
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
248.4
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
248.1
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
242.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
237.3
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
234.6
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
232.5
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
230.1
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
222.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
217.4
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
216.9
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
211.0
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
207.3
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
202.6
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
187.6
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
181.0
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
178.6
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
155.4
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
143.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
126.5
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAGLN2 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
432.4
Number of samples
81
Samples
Sample
Description
TPM
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1322.8
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
863.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
750.8
DO46374
0 years, female, NA, stage:III, dead, 1409 days
745.6
DO46327
0 years, female, NA, stage:III, dead, 184 days
739.0
DO46448
0 years, female, NA, stage:III, dead, 654 days
731.3
DO46368
0 years, female, NA, stage:III, dead, 2879 days
681.5
DO46453
0 years, female, NA, stage:III, dead, 3294 days
666.6
DO46370
0 years, female, NA, stage:III, dead, 1727 days
654.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
632.4
DO46354
0 years, female, NA, stage:III, dead, 843 days
629.9
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
626.5
DO46376
0 years, female, NA, stage:III, dead, 1430 days
624.2
DO46402
0 years, female, NA, stage:III, dead, 511 days
600.2
DO46586
0 years, female, NA, stage:III, dead, 1019 days
593.5
DO46350
0 years, female, NA, stage:III, dead, 886 days
569.7
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
556.8
DO46330
0 years, female, NA, stage:III, dead, 684 days
554.4
DO46463
0 years, female, NA, stage:III, dead, 2451 days
551.6
DO46328
0 years, female, NA, stage:III, dead, 972 days
549.8
DO46382
0 years, female, NA, stage:IV, dead, 311 days
490.0
DO46346
0 years, female, NA, stage:III, dead, 1187 days
482.0
DO46404
0 years, female, NA, stage:III, dead, 690 days
481.9
DO46581
0 years, female, NA, stage:III, dead, 408 days
480.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
477.4
DO46528
0 years, female, NA, stage:III, alive, 6139 days
475.9
DO46432
0 years, female, NA, stage:III, alive, 2218 days
471.3
DO46378
0 years, female, NA, stage:III, alive, 843 days
467.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
467.9
DO46560
0 years, female, NA, stage:IV, dead, 286 days
463.3
DO46571
0 years, female, NA, stage:III, dead, 243 days
461.5
DO46533
0 years, female, NA, stage:III, alive, 3667 days
452.7
DO46348
0 years, female, NA, stage:IV, dead, 287 days
441.5
DO46372
0 years, female, NA, stage:III, dead, 1326 days
441.2
DO46551
0 years, female, NA, stage:III, dead, 1055 days
438.4
DO46566
0 years, female, NA, stage:III, dead, 673 days
408.9
DO46400
0 years, female, NA, stage:III, dead, 719 days
405.8
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
401.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
401.6
DO46329
0 years, female, NA, stage:III, dead, 1699 days
401.3
DO46597
0 years, female, NA, stage:III, dead, 393 days
399.6
DO46602
0 years, female, NA, stage:III, dead, 205 days
399.4
DO46340
0 years, female, NA, stage:III, dead, 616 days
398.9
DO46334
0 years, female, NA, stage:III, dead, 496 days
387.4
DO46344
0 years, female, NA, stage:III, dead, 642 days
386.5
DO46508
0 years, female, NA, stage:III, dead, 2101 days
384.0
DO46443
0 years, female, NA, stage:III, dead, 2464 days
382.2
DO46332
0 years, female, NA, stage:III, dead, 689 days
375.9
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
370.5
DO46326
0 years, female, NA, stage:III, dead, 701 days
367.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
362.1
DO46396
0 years, female, NA, stage:III, dead, 583 days
350.0
DO46398
0 years, female, NA, stage:III, alive, 437 days
344.4
DO46342
0 years, female, NA, stage:III, dead, 1398 days
340.9
DO46468
0 years, female, NA, stage:III, alive, 2776 days
340.2
DO46392
0 years, female, NA, stage:III, dead, 628 days
334.0
DO46333
0 years, female, NA, stage:III, dead, 359 days
331.2
DO46518
0 years, female, NA, stage:III, alive, 2960 days
328.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
326.9
DO46384
0 years, female, NA, stage:III, dead, 614 days
325.9
DO46380
0 years, female, NA, stage:III, dead, 1423 days
312.4
DO46568
0 years, female, NA, stage:III, dead, 320 days
311.9
DO46493
0 years, female, NA, stage:IV, alive, 839 days
309.4
DO46336
0 years, female, NA, stage:IV, dead, 664 days
309.2
DO46366
0 years, female, NA, stage:III, dead, 2054 days
291.2
DO46591
0 years, female, NA, stage:III, dead, 195 days
289.8
DO46436
0 years, female, NA, stage:III, alive, 3193 days
289.0
DO46606
0 years, female, NA, stage:III, alive, 804 days
279.4
DO46362
0 years, female, NA, stage:III, dead, 1639 days
279.3
DO46546
0 years, female, NA, stage:III, dead, 1889 days
278.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
269.1
DO46588
0 years, female, NA, stage:III, dead, 438 days
229.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
224.4
DO46611
0 years, female, NA, stage:III, dead, 734 days
223.5
DO46358
0 years, female, NA, stage:III, dead, 423 days
205.8
DO46356
0 years, female, NA, stage:III, dead, 911 days
205.2
DO46331
0 years, female, NA, stage:III, dead, 612 days
184.4
DO46390
0 years, female, NA, stage:III, dead, 374 days
182.8
DO46408
0 years, female, NA, stage:III, dead, 489 days
177.1
DO46576
0 years, female, NA, stage:III, alive, 133 days
167.3
DO46561
0 years, female, NA, stage:III, dead, 195 days
119.9
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
1.0
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.8
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.8
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.7
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.7
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.7
15524912-685a-47ce-a824-567848_D2
Tumor
0.6
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.6
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.6
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.6
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.6
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.5
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.5
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.5
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.5
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.4
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.4
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.4
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.4
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.4
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.4
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.4
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.3
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.3
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.3
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.3
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.3
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.3
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.3
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.3
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.2
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.2
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.2
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.2
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.2
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.2
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.2
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.2
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.2
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.1
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.1
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.1
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.0
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.0
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.0
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.0
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.0
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.0
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.0
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.1
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.1
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.1
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.1
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.1
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.2
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.2
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.2
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.2
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.2
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.2
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.2
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.3
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.3
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.3
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.3
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.4
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.4
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.4
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.6
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.6
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.7
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.7
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.8
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.