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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
67.4
nTPM
GTEx:
67.4
nTPM
FANTOM5:
15.7
Scaled Tags Per Million
Pig:
69.4
nTPM
Mouse:
250.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 67.4
Samples: 105
Max nTPM: 110.0
Min nTPM: 44.0
Std nTPM: 10.8
Median nTPM:
375_1
74 years, female
110.0
415_1
77 years, female
91.9
229_1
69 years, female
87.7
265_1
87 years, male
87.7
126_1
63 years, male
87.5
162_1
79 years, female
87.0
447_1
81 years, male
87.0
414_1
84 years, female
84.5
379_1
60 years, male
82.3
319_1
81 years, male
80.8
490_1
67 years, female
80.4
81_1
67 years, male
79.9
396_1
62 years, male
78.8
9_1
66 years, female
78.1
468_1
89 years, male
77.8
404_1
82 years, female
77.7
413_1
59 years, female
77.4
246_1
77 years, male
77.3
324_1
76 years, male
77.3
237_1
82 years, male
76.9
6_1
73 years, female
76.8
386_1
76 years, male
76.8
389_1
86 years, female
76.6
377_1
82 years, female
76.5
466_1
57 years, female
75.5
142_1
61 years, female
75.2
115_1
83 years, male
73.9
313_1
79 years, female
73.9
347_1
72 years, male
73.4
266_1
85 years, male
72.7
315_1
62 years, female
72.4
35_1
74 years, female
72.2
153_1
70 years, female
72.2
189_1
76 years, male
72.2
243_1
75 years, male
72.1
43_1
64 years, female
71.9
254_1
77 years, female
71.6
117_1
61 years, male
71.1
352_1
62 years, male
70.7
316_1
62 years, male
70.4
526_1
61 years, male
69.9
172_1
72 years, female
69.0
354_1
81 years, female
68.8
384_1
83 years, male
68.7
321_1
62 years, female
68.5
217_1
76 years, male
68.4
286_1
68 years, female
67.9
32_1
67 years, male
67.7
177_1
74 years, male
67.7
17_1
71 years, male
67.6
4_1
88 years, female
67.5
120_1
70 years, female
67.3
376_1
75 years, female
66.8
480_1
63 years, male
66.8
499_1
55 years, female
66.7
518_1
75 years, female
66.7
425_1
59 years, female
66.6
307_1
66 years, female
66.2
335_1
73 years, female
65.7
145_1
84 years, male
65.6
405_1
91 years, male
64.8
292_1
71 years, male
64.1
149_1
88 years, male
63.6
349_1
83 years, male
63.1
311_1
78 years, male
62.6
394_1
75 years, female
62.2
356_1
87 years, female
62.0
517_1
88 years, male
61.9
2_1
77 years, female
61.8
173_1
67 years, male
61.7
322_1
76 years, male
61.7
501_1
88 years, male
61.3
137_1
83 years, male
60.4
406_1
79 years, male
60.3
139_1
64 years, female
59.8
18_1
88 years, male
59.7
318_1
68 years, male
59.6
353_1
82 years, female
59.5
503_1
68 years, male
59.2
452_1
88 years, female
58.6
251_1
78 years, male
58.5
350_1
84 years, female
58.4
491_1
89 years, female
58.1
41_1
94 years, female
58.0
109_1
81 years, female
57.7
218_1
71 years, female
57.4
163_1
78 years, male
57.1
293_1
68 years, female
57.1
119_1
70 years, female
56.9
351_1
91 years, male
56.7
355_1
70 years, female
56.6
264_1
73 years, female
56.5
89_1
63 years, male
56.4
348_1
84 years, male
56.1
314_1
67 years, male
54.7
99_1
64 years, male
53.6
291_1
76 years, male
53.4
288_1
66 years, female
53.2
42_1
85 years, male
53.0
317_1
60 years, male
53.0
320_1
89 years, female
50.9
506_1
65 years, male
50.6
295_1
61 years, female
49.5
495_1
57 years, female
48.7
308_1
70 years, female
44.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
