HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:38.6 nTPM
GTEx:39.8 nTPM
FANTOM5:10.9 Scaled Tags Per Million
Pig:39.9 nTPM
Mouse:61.1 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037433Antibody HPA037434
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.6
Sample id Sample description nTPM
Hippocampus
nTPM: 37.9
1855 Male, age 76, left hemisphere 42.2
2529 Female, age 94, left hemisphere 39.1
1911 Female, age 85, right hemisphere 38.0
1898 Male, age 80, left hemisphere 37.8
2148 Female, age 91, left hemisphere 36.2
2621 Female, age 67, right hemisphere 34.0
Dentate gyrus
nTPM: 35.2
2010 Male, age 76, both hemispheres 39.4
2530 Female, age 94, left hemisphere 39.4
2246 Female, age 85, both hemispheres 38.5
1927 Female, age 91, both hemispheres 34.5
2528 Male, age 74, both hemispheres 32.6
2531 Female, age 67, both hemispheres 27.0
Entorhinal gyrus
nTPM: 35.4
2613 Female, age 94, left hemisphere 37.6
2117 Female, age 91, right hemisphere 37.0
1787 Male, age 76, left hemisphere 36.3
1938 Female, age 85, left hemisphere 36.1
2764 Male, age 80, right hemisphere 33.2
2686 Male, age 75, right hemisphere 32.1
Hippocampus, CA1
nTPM: 38.6
2749 Male, age 80, left hemisphere 45.4
1873 Female, age 85, both hemispheres 38.9
2045 Male, age 76, both hemispheres 37.5
2527 Male, age 74, both hemispheres 35.8
2082 Female, age 91, right hemisphere 35.4
Hippocampus, CA2
nTPM: 35.3
1892 Male, age 76, both hemispheres 40.2
1963 Male, age 80, left hemisphere 35.0
2249 Male, age 74, both hemispheres 34.8
2437 Female, age 94, left hemisphere 34.8
2113 Female, age 91, right hemisphere 34.6
1940 Female, age 85, left hemisphere 32.5
Hippocampus, CA3
nTPM: 36.1
1867 Male, age 76, both hemispheres 41.2
2137 Male, age 80, left hemisphere 38.7
1891 Female, age 85, both hemispheres 38.2
2620 Female, age 94, left hemisphere 33.0
2436 Male, age 74, both hemispheres 32.7
2861 Female, age 67, both hemispheres 32.6
Parahippocampal cortex
nTPM: 34.6
2692 Male, age 74, both hemispheres 41.8
1933 Female, age 85, both hemispheres 35.0
1990 Female, age 91, right hemisphere 34.7
2693 Female, age 94, both hemispheres 34.6
2018 Male, age 76, both hemispheres 34.3
2250 Female, age 67, right hemisphere 34.2
2532 Female, age 72, left hemisphere 34.2
1850 Male, age 80, both hemispheres 33.9
2245 Female, age 91, both hemispheres 31.8
2622 Female, age 67, right hemisphere 31.0
Perirhinal gyrus
nTPM: 33.4
2848 Male, age 76, right hemisphere 34.6
1847 Female, age 91, left hemisphere 34.0
1841 Female, age 85, right hemisphere 33.8
1794 Male, age 80, right hemisphere 32.3
2521 Female, age 94, right hemisphere 32.0
Subiculum
nTPM: 37.1
2042 Male, age 76, both hemispheres 38.7
2619 Male, age 74, both hemispheres 37.9
1901 Male, age 80, both hemispheres 37.7
1977 Female, age 85, both hemispheres 37.5
2729 Female, age 91, right hemisphere 36.9
2438 Female, age 94, left hemisphere 33.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 63.9
Min nTPM: 25.1
Std nTPM: 6.8
Median nTPM: 39.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 61.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.0
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 55.8
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 54.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 54.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 53.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 53.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 52.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 51.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.9
FF:10153-102I9 76 years, female 14.6
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.9
Pig sample Sample description nTPM
Subiculum
nTPM: 34.1
Samples: 4

Max nTPM: 42.8
Min nTPM: 29.4
Sample A Female 42.8
Sample B Female 32.6
Sample C Male 31.4
Sample D Male 29.4
Dorsal hippocampus
nTPM: 39.9
Samples: 4

Max nTPM: 50.9
Min nTPM: 30.4
Sample A Female 50.9
Sample B Female 37.2
Sample C Male 41.2
Sample D Male 30.4
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 35.6
Min nTPM: 30.7
Sample A Female 35.6
Sample B Female 34.2
Sample C Male 30.7
Sample D Male 31.0
Ventral hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 39.5
Min nTPM: 28.4
Sample A Female 37.0
Sample B Female 28.4
Sample C Male 39.5
Sample D Male 38.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 61.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.0
Samples: 4

Max nTPM: 60.5
Min nTPM: 55.3
Sample A Male 59.4
Sample B Male 56.8
Sample C Female 60.5
Sample D Female 55.3
Hippocampal formation
nTPM: 61.1
Samples: 4

Max nTPM: 64.7
Min nTPM: 55.9
Sample A Male 64.7
Sample B Male 55.9
Sample C Female 62.1
Sample D Female 61.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69059804 Antisense, RP_050317_04_A09, Mouse strain C57BL/6J (56 days, male) 6.8

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